KEGG   Cynoglossus semilaevis (tongue sole): 103381934
Entry
103381934         CDS       T04866                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec31A-like
  KO
K14005  protein transport protein SEC31
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:csem00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103381934
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csem04131]
    103381934
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:csem02044]
    103381934
Membrane trafficking [BR:csem04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    103381934
Secretion system [BR:csem02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   103381934
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40 Beta-prop_TEP1_2nd WDR55 TPR_Sec16 Beta-prop_EML EIF3I Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_DCAF4 MIOS_WD40 Prp18 MukF_M Beta-prop_DCAF12 Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 103381934
NCBI-ProteinID: XP_008312766
LinkDB
Position
8:complement(9056814..9066470)
AA seq 1214 aa
MRLKEIQRTAHQAWSPAGHHPIYLALGTSAEQLDASFNTTAALEIFEMDFSDPSMDMQLK
GSLPTSNRLHSIVWVNYGEGTGGRIVAGSENGLVTVYDPEGIISGAEAVVGQSDKHTGPV
RALDFNPFQNNLLASGANDSEIYIWDLNNLSSPMTPGAKTQPTEDISVVSWNRQVQHILA
SANPSGKAVVWDLRKNEPIIKISDHSNRMHCSGMLWHPDVATQLVLASEDDRLPVIQMWD
LRFATSPLKVFENHTRGILSISWSQADSELLLSSAKDNRILCWNPNTGEVIYELPTTNQW
CFDVQWCPRNPALLSTASFDGRITVYSVMGGSLKAQQQGTVDKISSSFDTMDPFGTGQVL
PPLQVPQPTAKDTIIPPLKKPPKWVRRPVGASFAFGGKLITFENPKLPPLQSPQPVPRQV
FVSQVTTETEFLQRSRELQAALQAGSFNNYCQAKIQNAKSDAEQDIWKFLLVNFEDEARI
KFLRLLGFSKDELDRKISKCLGKNFQPNGHGVDAKDLAEKMQRLSTERSDESAAGDAQTS
GSVSPADFFNQTPNENFQIPVSCDTDGLISQALLVGNFEGAVDLCLNDGRYAEAILLSIS
GGEELLKKTQQKYLSRQKNSISMLISSVLTQNWRDIVQSCELDNWKEALAALLTYAHPED
FACLCDTLGERLQQEGTEKRCLQACLCYICSGNVEKLVECWALHKECSSPLGLEDLVEKV
MMLRKSIERLRNSEVAVQSPILAEKLTHYAGILAAEGSLSTAMTYLPETSDQPGITMLKD
RLFHAQGEAAVGQKPQNSSNRVGAAAAKPAPAAAHTPAPKAQIMGQYQRPNPAQVPAQPQ
PPMPSVFTPNAAPTNTGPGLPPSSHVPPPCAARPAMGPSYPPHRPPAPGFIPQQPFQPHP
MSMAGPSAYTAPPTSMPATGLSGPSLSPPSSTPGGLPPMPSPGVPPTGLMPSTSLPSGFM
PPSSQPGAPVPMYPGGVHSQLPAPSMAPGPFVPLGSGYPQGGPGAPAVKSFSQPAVGPPP
TGYFPWLNPDLTGPQEGWNDPPAVKGGPRKKKIPDNYTPPVPITAPVMRFPMDTPQPHDP
TQVPPGAPKEPSVQLLQQLPXXXXXXXXXXMVLKSTFDGLVQRCQLAAGDPQTKRKLDDA
AKRLGYLYDKLREQSLSHNILNGLHEISRCVASQNYQRGLEVHTQVVSSSNFSEISAFMP
ILKVVMTIANKLGV
NT seq 3645 nt   +upstreamnt  +downstreamnt
atgaggctaaaggagattcagaggactgctcaccaggcgtggagtcctgcaggacatcat
cccatctacctggccttgggaacatcagcagaacagctggatgcctcctttaacaccaca
gctgccctggagatctttgagatggatttttctgacccctctatggacatgcaattaaaa
gggtccttgcctacctcaaataggttgcatagtatcgtatgggtgaactatggcgaaggt
accggaggaagaatagttgctggcagtgaaaatggcttggtaactgtgtatgatccagaa
ggaataatctctggggcagaggccgtggtgggacagtctgacaaacacacagggccggtt
cgagctcttgacttcaacccatttcagaataacctcctggcatcaggggcaaatgattca
gagatctacatctgggatttaaacaacctgagcagtccaatgacacctggagcgaagaca
cagccaactgaagacatcagtgtcgtgtcctggaacagacaggtgcagcacattctggca
tctgccaaccccagtgggaaagctgtcgtgtgggacctaagaaagaacgagccgatcatc
aagatcagcgaccacagcaacaggatgcactgctcaggaatgttgtggcatccagatgtg
gccactcagttggtgctggcctctgaagatgaccgactgccagtcatccagatgtgggat
cttcgtttcgctacgtcacctctcaaagtctttgagaaccacacaaggggtattctgtca
atatcctggagccaggctgactcagagctcctgttgagcagcgctaaggataaccggatc
ctgtgctggaatccgaacactggagaggtgatctatgagctgccaaccacaaatcagtgg
tgttttgatgtccagtggtgtcccaggaatccggcgctgctttccacggcttcattcgat
gggagaatcactgtgtattctgtgatgggagggagcttgaaagcccagcagcaaggcacg
gttgataagatctcctcctcatttgatacaatggatccctttggtacagggcaggtgttg
cctcctctacaggtccctcagcccacagctaaggacaccatcattcctcctctaaagaaa
ccccccaagtgggtacgcaggccagttggcgcttcattcgcattcggtggaaagctgatc
acctttgagaatcctaagctgcctccgttgcagagccctcagcctgtccccaggcaggtg
tttgtgagccaggttaccacggagacagagttcctccaacgctccagggagcttcaggcg
gcgctgcaggcgggttccttcaacaactactgccaggccaagattcaaaacgccaagtca
gacgctgagcaggacatatggaagttccttctggtgaattttgaggatgaggctcggatc
aaattcctcagactgttgggtttcagcaaagatgaattggacagaaagatttcaaaatgc
ctgggtaaaaattttcaacccaatggacatggggtggatgccaaagatttggcagaaaag
atgcagcgactttccacagagaggtctgatgaatcagctgcaggtgatgctcaaacttca
ggctctgtttcacctgcagacttctttaatcagacaccgaatgaaaacttccagattcct
gtgtcatgtgatactgatgggctgatcagccaagctctgttggttggtaactttgaggga
gcggttgatttgtgtctgaatgacggccgttacgctgaagccatccttctgtccatcagc
ggcggcgaagagctgctcaagaaaactcagcaaaaatacctgagcagacaaaagaacagc
atctctatgcttatatcatcagtgttaacccagaactggagagacatcgtgcagagctgc
gaactagacaactggaaagaagctctcgctgctcttctcacctacgctcaccctgaagac
tttgcgtgtctctgcgatacattgggagagcggttgcaacaggaggggacagagaagcgc
tgcctacaggcctgcttgtgttatatctgctctgggaatgtggagaagctggtggagtgt
tgggccttgcacaaagagtgctcctcgcccctcggtttagaggatctggtggagaaagtg
atgatgttgcgcaagtccattgaacgcctgcgtaacagcgaggtggcggtccagagcccc
atcctggccgagaaattaactcactatgccggcatcctggctgcagagggcagtctgtcc
acggcgatgacctacctgcctgagacctcagaccaacctgggatcacgatgctgaaagac
agactgttccacgctcagggagaggctgcggtcggacagaaacctcagaattcctctaac
agagtcggcgcagcagctgccaaacctgctcctgctgcagctcacactcctgcaccaaaa
gcacagattatgggtcaataccagcgccccaaccctgcccaggtgcctgcacaaccacag
cctccgatgccgtctgtttttaccccaaatgctgctccaaccaacactgggcctggtttg
ccaccgtcttctcacgtacccccaccttgtgcagctcgccctgcgatgggcccctcctac
ccaccacatcgtcctcctgctccaggtttcattcctcagcagccatttcaaccccacccc
atgtccatggccggaccctccgcttacactgctccacctacttcaatgccagccacggga
ttatcaggcccttcactgtcgcctccgtcctcaacccctggaggtctgcccccaatgccc
agccccggggtgccaccaacggggctcatgccatctacctctttgccctcaggcttcatg
cctcccagttcccaaccaggagctccagttcccatgtatccaggaggagttcacagccag
ctccctgcaccttccatggccccggggccctttgttcctctcggatcaggatacccacag
ggaggccccggcgcccctgctgtcaagtccttttcgcagcctgctgtcggtcctcctcct
acaggatattttccctggctgaatcctgaccttacaggacctcaggagggctggaatgac
ccaccggcagtcaaaggtggtcccaggaagaagaagatccctgataactacactccaccg
gtgcccatcacagctcctgtgatgagattccccatggacacccctcagccccacgacccc
actcaggtccctcctggagccccaaaggagcctagtgtgcagcttctccagcagctgccn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnacatggtgctaaaatccacctttgatggtctg
gtgcagcgctgccagctagctgctggagatcctcaaacaaaaaggaaactggacgatgcg
gccaaacgtctgggatacctttacgacaagttgagggagcagtcgctgtctcacaacatc
ctcaacgggctgcatgagatcagccgatgcgtagcaagccagaactaccagcgtggcctg
gaggtgcacacccaagtggtcagcagcagcaacttcagtgagatctccgccttcatgccc
atcctcaaagtggtcatgaccatcgcaaataagctgggtgtctga

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