KEGG   Cynoglossus semilaevis (tongue sole): 103382112
Entry
103382112         CDS       T04866                                 
Symbol
itgb4
Name
(RefSeq) integrin beta-4 isoform X1
  KO
K06525  integrin beta 4
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem04382  Cornified envelope formation
csem04510  Focal adhesion
csem04512  ECM-receptor interaction
csem04518  Integrin signaling
csem04810  Regulation of actin cytoskeleton
csem04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:csem00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103382112 (itgb4)
   04518 Integrin signaling
    103382112 (itgb4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103382112 (itgb4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103382112 (itgb4)
   04810 Regulation of actin cytoskeleton
    103382112 (itgb4)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    103382112 (itgb4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csem04147]
    103382112 (itgb4)
   04515 Cell adhesion molecules [BR:csem04515]
    103382112 (itgb4)
   04090 CD molecules [BR:csem04090]
    103382112 (itgb4)
Exosome [BR:csem04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   103382112 (itgb4)
  Exosomal proteins of bladder cancer cells
   103382112 (itgb4)
Cell adhesion molecules [BR:csem04515]
 Integrins
  Integrin beta subunits
   103382112 (itgb4)
CD molecules [BR:csem04090]
 Proteins
  103382112 (itgb4)
SSDB
Motif
Pfam: Integrin_beta fn3 Calx-beta Pur_ac_phosph_N FN3_DSCAM-DSCAML_C Integrin_B_tail I-EGF_1 PSI_integrin EGF_integrin EGF_Teneurin EGF_TEN EGF_2 vWA_SIBA-E I-set
Other DBs
NCBI-GeneID: 103382112
NCBI-ProteinID: XP_016889700
LinkDB
Position
8:11344476..11367862
AA seq 1927 aa
MGRWALHLSAGLGLLAVLLMSSYAEENYCFAARDTTCSKCLQAGKGCAYCPEENFHGPRC
DRHENILAHGCTAAAIITAHSSNRTDKAERINTRLQQSQVSPQQLTMTFLPGEEKMVDVE
VFAPTKGPLDLYILMDFSNSMADDLDNLKRMGSKLATVVGTLSDDYTIGFGKFVDKVIEP
QTDMRKSKLESPWPNSDPPFSFENVIKLTSNEDEFTRILQKEKISGNLDAPEGGFDAILQ
AAVCQEQIGWRAHSTHLLVFSTESAFHYEADGVNVLSGILKRNDEHCHLNPEGKYTHDTV
QDYPSIPTLVRLLGKHNIIPIFAVTNHSYTYYQKLEKYFPIAEVELLQEDSSNILQVMES
AFKRIRSKMSIRAEDRPKAFETQFLSTNGTVAQYGAFDFKPGETGKFKMLLKAQRMVEET
PVCQMDGEDTSGKMRIKPTTFSAAVNVEASVLCPVCDCEKTPIIRSPLCHGNGDLVCGKC
RCYDGWLSRYCNCSATGAALDTSQCKGPGMTEPCSGRGDCLECGTCVCYNPDQFEGPYCQ
YDKTQCQRFGGFLCNDRGSCIMGRCSCTEGWQGNACECPMSNQTCLDNKKGICNGRGKCV
CGKCECENMEVDLTATCEPNFQAQLGACEATRDCVQCQAWKTGRKKDDCKCPFKIFWVDE
LKHSELVRDSCSFRDEEDDCTYHYTAENPIDPTDGILKVKVLKKKDCPAASLLWLLPLIL
FLLLLLALLLLCCWKYCACCKSCCQSCLALLPCCRRGRMVGFKEDEYLLRQSLLTSDHLD
TPMVRTGPPKGTDVVRWKITDNVHRAPNHPQALIKPNPKEIIQFPISLRLNRLLSENLTR
PDSRDTEQLRKDVADNLNEVYKQIPGAQKVQKTVFRSQRNAGKRQDYTIMDTVLSAPRSS
FPDIVKLTEKNVQSGNFHDLKVVPGYYTVATDREAAGAVEFQEDVESVDVHVPLFVKDED
DDKKQLLVEAVDVPLGIAEIGKRLVNITIIKEHASSVFSFLQPSYTYSRGDGVANIPISR
EIIEDGRTQVTYRSRDLTAKDKKDYITVEGDLSYSPGETQKIVPVRLLELTERDGLLDDK
QVKQFVLDLSNPRQGAKLGRYPRTTVTIADQPDPGVIMFKKGTQNFSTFDPSYVIPVVRT
RNPESPATVKWRTRKSQRFELSGPLKFAPGETEKNIIIEPKTHPGPIQPETFQVELYEPS
SNTTIGERKTTIVNITDGVQQKDFISPKVPPPGGLLLAPGNSKAIATGPRNISLNWDPPP
GNPQGYKVKYWIYGDPEKNAQVIDVKTPQAELTNLYPYCDYEMRVSAYNSVGEGYNTDII
TCQTLEDVPGEPGRLAFNVISPTVTQVSWAEPAETNGNITAYEVIYTPINDDMKPVGAAK
KVKIDNPKKRMLVIENLQNAQTYQYKVRAKNSMGWGPFRDATINLASQPTRPLSIPIIPD
IPIVDAEAGDEYDSYLMYSNEVLKSPAGSKTPSVAGDDMMMNGKWDQSFMFPGGSVTRNL
STSSSPMSTLSSNYRGGNSSFTTETTYMSGPGTTRMIGGGVQTTDVIMRKRSENRGYTDE
NIRDSIVMGDLSAKFADLAGGYGYTGMQSSSQSQFSYNLSQGSRARTQSTDVNEALYNLD
RVLHDARLNPGVPDTPSRLVFSALGPTALKVSWQEPHCDKDILGYCVLYQLINGGEVKRM
NITNPAENSVIITDLLPNHSYLFKVKAQSQEGWGPEREGVITIESAVDPKSPLSPMPGSP
FTLSTPSAPGPLVFTALSPDSLQLSWEKPRKPNGDILGYVVTCEQLHGGDDMRSFQVNGD
STETSLTVPNLTENVPYKFKVQARTTQGFGPEREGIITIESQDGGAMSQYNNKSMTRRDV
FHMPTEVTTRTNISHAMHSDPFFSDGMMMTTQHTETSGMVTRQITKEVVQREVIGGATVT
KKMFYES
NT seq 5784 nt   +upstreamnt  +downstreamnt
atggggagatgggcgttacatctctcagcggggctcgggcttctggccgtcctgttgatg
tcgtcttacgctgaggagaactactgctttgctgccagagataccacctgctctaagtgt
ctgcaggctggaaaaggctgcgcctactgccccgaggagaactttcacgggcctcgctgt
gaccgtcatgagaacatcctggcccacggctgcactgctgcggcaatcatcaccgcccac
agcagcaataggacagacaaggctgagaggatcaacacgaggctccagcagtcccaggtg
tcacctcagcagctgaccatgaccttcctgccaggagaggagaagatggtggacgtggag
gtgtttgctcctaccaaaggtcctctggatctttatattcttatggacttctccaactcc
atggctgacgatttggacaacctgaagaggatgggctcaaagctggccaccgtagtggga
acgctgtccgatgactacaccatcggctttgggaagtttgtggacaaagtgatcgagccg
cagaccgacatgaggaaatcaaagctggaatccccatggccaaacagtgaccctccattc
tcctttgaaaacgtcatcaagctgacaagcaatgaggacgaattcaccaggatcctgcag
aaggagaagatatctggaaacctggacgctcctgaaggaggcttcgacgccatattacag
gctgcagtttgtcaggagcaaattggctggcgagctcacagtactcacctgctggtgttc
tccaccgagtctgcatttcactacgaggctgatggtgtcaacgtgctctctggcatcctg
aagcgcaacgacgagcactgccacctgaaccctgagggcaaatacacccacgatacagtg
caggactacccctcaatacccactctggtgcgcctgctgggcaaacacaacatcatcccc
atctttgccgtcaccaaccactcctacacctactaccagaaacttgaaaagtatttcccc
atcgcggaagtcgagctgttgcaggaggattcctccaacatcctccaggtcatggagagt
gccttcaagagaatccgttccaagatgagcatccgtgcagaagacaggcccaaggctttc
gagactcagttcttgtccaccaacggaactgtcgcccaatacggtgcctttgacttcaag
cctggagaaacaggcaagttcaagatgcttctgaaagcccagaggatggtggaggagacg
cccgtgtgccagatggacggtgaagataccagtggcaagatgagaatcaaacccacaacc
ttcagtgctgccgtcaatgtcgaggcatcggttctgtgcccagtctgtgactgtgagaag
actcctataattagatcaccgttatgtcacggcaacggagacctggtgtgtggaaagtgt
agatgttatgacggctggctgagtagatactgtaactgctcagccactggtgcagcgctg
gacaccagccagtgcaaaggtccaggcatgactgaaccgtgttccggtcgtggagactgc
ctcgagtgtgggacgtgtgtgtgctacaaccctgatcagtttgaaggtccttactgtcag
tacgacaaaacccagtgtcagcgatttggtggctttctctgcaacgaccggggctcttgt
attatgggtcgctgctcctgcacagagggttggcagggaaatgcctgcgagtgtcctatg
agcaaccagacctgtctggacaacaagaagggtatctgcaacggccgaggtaaatgtgtg
tgtggcaaatgtgagtgtgaaaacatggaggtggatctgaccgcaacttgtgagccaaat
tttcaggcccagctgggtgcttgtgaggcgaccagagactgtgttcagtgtcaagcctgg
aagacagggaggaagaaggacgactgcaagtgtcccttcaaaatattctgggtggatgaa
ctcaaacactcggagttggtgcgtgactcgtgcagtttccgtgacgaggaagacgattgt
acgtaccattacactgcagaaaaccccatagatccaactgacggaatcctgaaagttaaa
gtgctgaagaagaaagattgtcctgctgccagcctcctgtggttgctgcctctgatcttg
ttcctgctcctgttgctcgcactccttctgctctgctgctggaagtactgcgcctgctgc
aaatcctgctgtcagagttgtttagccctgctgccctgctgtagacgaggtcgtatggtt
ggtttcaaggaggacgagtatctgctccgtcagtctctgctcacctcagaccatctggac
acgcccatggtgaggacaggaccacccaagggaacggacgtggttcggtggaagatcact
gacaatgttcaccgtgcacccaaccatccacaggctctgataaaaccaaaccccaaggag
atcattcagttcccgatctcgctgcgactgaacagactgttgtccgagaacctgacccgt
cctgattccagagacacggagcagctccgcaaggatgtggccgacaatctgaatgaggtg
tacaaacagattcccggggcccagaaggtgcaaaagacagttttcagatcgcaaagaaat
gctggaaaaaggcaggactacaccatcatggacaccgtcctgtctgctcctcgcagcagt
tttcctgacattgtcaaactcacagagaagaacgtccagtctggaaacttccatgacctc
aaagttgtccctggatactacacagtggccacagacagagaggcggcaggagccgtagag
ttccaggaggacgtggagtccgtggacgttcacgtgccgctcttcgtcaaagatgaagat
gacgacaaaaaacagcttctggtagaggccgtggacgtaccactgggcatcgctgagatt
ggaaaacgtttggtcaacatcaccatcattaaagagcatgcctccagcgtgttctccttc
ctccagccttcatacacctacagtcgaggagacggagtggccaacattccaatcagcaga
gagatcatcgaggatggacgcacacaggtcacatatcgttcacgtgacctcacggccaag
gacaagaaggactacatcaccgtggaaggcgacctgagctacagtcctggtgagacccag
aagatagttcccgttcgtctgctggagctgacagagagagatggcctcctggatgacaaa
caggtcaaacagtttgtcctggacctcagtaacccacggcagggcgccaaactgggacgc
tacccaagaactacagtcactattgctgaccaaccagatcccggtgtaataatgttcaaa
aagggaacccagaacttcagtacatttgacccatcctacgtcatccctgtggtccgcact
cgaaacccagaaagtcccgccacagtcaaatggcgaaccaggaagtcccaacgatttgag
ctatctggcccactgaagtttgctcctggagaaacagagaagaacatcatcattgaaccc
aaaactcaccctggacctatccaaccagagaccttccaagtggaactgtatgagcccagc
agtaataccaccattggagagaggaagaccaccatagtcaacatcacagacggagttcag
cagaaggacttcatcagtcctaaagtccccccccccggtggtctcctgcttgcaccagga
aactctaaagccattgcaactggacccagaaatatttccctgaactgggacccaccccct
ggtaatccccagggctacaaggtgaaatactggatctatggcgacccggagaaaaacgcc
caggtcatagacgtgaagacacctcaggctgagctgaccaacctctacccctactgtgac
tatgagatgagggtgtcggcctataactcagtgggagaaggatacaacaccgacatcatc
acttgtcaaactctggaggacgtgcctggtgagcctggacgtctggccttcaacgtcatc
agtcccactgtcactcaggtcagctgggcggagcctgcagagactaatggcaacatcaca
gcctatgaggtcatctacacgcccatcaatgatgacatgaaaccagtgggcgctgccaag
aaagtaaagatcgataaccctaagaagcgaatgctggtgatcgagaacctgcagaacgcc
caaacctaccagtacaaggtccgtgcaaagaacagcatgggttggggccccttcagggac
gccaccatcaacctggcatcacaacctacaagaccactgtccattcccatcattcctgac
atccctattgtggatgcagaggcaggagacgagtatgacagctacctgatgtacagcaac
gaggtgctgaaatcccccgcaggctccaagacacccagcgtggctggtgatgatatgatg
atgaatggaaagtgggaccagagcttcatgttcccaggaggatcagtgacacgcaacctg
tccacgtcgtcttctcccatgtccacgctgagctccaactacagaggaggaaacagctcc
ttcaccacagaaaccacctacatgtctggaccagggaccactcgtatgattggtggtgga
gtccaaacaacggacgtcatcatgaggaagcgctcggagaacagaggctacacagacgag
aacatccgtgactccattgtcatgggagatttatctgccaagtttgcagatctggcaggt
gggtacggctacactgggatgcagagcagctctcagagccagttcagctacaacctgtct
cagggttcaagggccaggacccagtctacagacgtcaatgaagccctgtataatctggac
agggttctccacgatgcccgactcaaccctggtgtccctgacacccccagcagactggtc
ttctctgctctgggccccacagccctcaaggtcagctggcaggaaccccactgtgacaaa
gacatcctgggttactgtgtcctctatcagctgatcaatggaggtgaagtcaaacgcatg
aacataacaaacccagctgagaactcagtcatcatcacggacctgctgcccaaccactcc
tacctattcaaggtgaaggctcagagtcaagaaggctggggccctgaaagagaaggagtc
atcaccatcgagtctgccgttgaccccaagagtcccctcagtccgatgccaggttcaccc
ttcactctgagcacgcccagtgcaccaggacctctggtcttcaccgctctgagccccgat
tccctgcagctcagttgggagaaacctcgcaaacccaacggcgacatcctgggctacgtg
gtcacctgtgagcagctgcacggtggagatgacatgcgatccttccaggtgaacggtgac
agcactgagaccagcctcaccgtccccaacctgacggagaacgttccctacaagttcaaa
gttcaggcccggaccacacagggcttcggaccagagagagagggcatcatcaccatcgag
tcacaagatggaggtgcaatgtctcagtacaacaacaaatcaatgacaagaagggatgtt
ttccacatgccgacagaagtgaccacacggaccaacatctcgcacgctatgcacagcgac
cctttcttttcagacggcatgatgatgaccacgcagcacacggagaccagcggcatggtg
acccgtcaaatcaccaaggaggtggttcaaagggaggtcatcggaggagcgaccgtcaca
aagaagatgttttatgaatcataa

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