Cynoglossus semilaevis (tongue sole): 103382296
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Entry
103382296 CDS
T04866
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X2
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03013
Nucleocytoplasmic transport
csem03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103382296 (srrm1)
03015 mRNA surveillance pathway
103382296 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103382296 (srrm1)
03041 Spliceosome [BR:
csem03041
]
103382296 (srrm1)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103382296 (srrm1)
Spliceosome [BR:
csem03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
103382296 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
103382296
NCBI-ProteinID:
XP_008313300
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Position
1:complement(2508725..2519673)
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AA seq
833 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKHKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFVFNQLEEKHPDSKMMQINLTGFLNGRNAREFMKDLWPLLLSAQENIAGIP
SAFLEQKKEEIKQRQIEQEKLASLKKVDDDKKEKEARERAQSKSPRRRKTRSPSPRRRSP
VKREKKRSPSRSPRRKSSPLVSSSPPPPLMQLPAKHSEQLAEPDMSGRPVPEPVVQEASS
ACDTVVEVVKADSVTQVKEPTPEKVNKKEERPRSREREKETRREKPHHRSRSHSRSRRRR
SRSRSHSPRRRPSPRRRMSPRRRSPPRRGPPASRHRHRRSPIRRRRSRSASSSGSSISGS
RSPKKVLKRVSTTPPRKQMPYRDASTSPAGKDRRSPSPRARKGRSSVSPPRSSGLKAKPG
RRADSPVKPRHSEESESEEDKNDKGATADSVQQRRQYRRQNQQSSSDTGSSSSEDEAPKR
PAPGAAARNGEVRRRRSRTPSPRRRHRDPSPRKRRSPSPGRRRRTPSPPRRRRSPSPPRR
RSPSPPPRRRSPSPRRYSPPIQRRYSPSPLPPQKRKMSNSPARRPSPGAKRRPSRSPKRR
SPPLHRRRSPPRSSSPPRHRRSPMHSGWQGRDTRSPPRMSPSPVGRGRAARVSTSPQGRF
EKSVSPNHRKPQSPMHSNNKPIRRVSRTPEPRNQRASVSPQPMRKVSSRSRSASPQPAAQ
KRPLPASASRSPSRSTSRSPPPAKKPSSASLSRSPSKTSDIDGSGKKKKKKKEKKHKKEK
KHKKHKKHKREKIGGTGTTAAAAAAGGGGGGTGTGDEQENQATEQDGDSRKML
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggatttttccgcggcacaagtgcggaacaagacaaccgtttcagcaacaaa
cacaagaaactgttgaagcagctgaaattcgcagaatgtctggacaaaaaggtggacatg
accaaagtgaacctggaggtgatcaaaccctggattactcagcgtgtgacagagattctg
ggattcgaggacgatgttgtcatagagttcgtatttaaccagctggaggagaagcaccca
gatagcaaaatgatgcagatcaatctgacgggtttcctgaatgggaggaatgcccgggag
ttcatgaaggatctgtggcccctgctgctcagtgcccaggaaaacatcgccggcatcccg
tctgcttttctggaacagaagaaagaagaaattaaacagagacagattgaacaggagaag
ttagcgtctctgaagaaggtggacgacgacaagaaggagaaagaagccagggagagagct
caatccaaaagcccacgcaggcgaaagaccaggtcgccatcacctcgacggcgttcgcca
gtaaagcgtgaaaagaagcgtagcccctcacgctcaccgagacgtaaatccagcccgctc
gtcagcagctcccctcccccgcctctgatgcagctgcccgccaaacattcagagcagctc
gcagaaccggacatgtcaggcaggcccgtgcccgaacccgtggtccaagaagcttcttcc
gcctgtgacacagttgttgaagtcgtcaaagccgactcggtcacacaggtcaaagaaccc
acccctgagaaggtgaacaagaaagaggagcggcccaggtcacgggaacgagagaaggaa
accagaagggaaaaaccacaccatcgatcccgttctcattctcggtctcgcagacgtcgc
tcacgttctaggtctcactctcctcgtaggagaccaagtcccaggaggcgaatgtcccct
cgcagaaggagtccacctcgacgaggtccccccgcctccaggcaccgtcacagacgttct
ccaattcgcaggaggcgctctcgttctgcctcatcctctggtagcagcatttcgggctct
cgctcaccgaaaaaagttttgaaacgagtatcgaccacacctccccggaaacaaatgcct
tatcgagacgcttccaccagcccagccggtaaggacagacggtccccatctcccagggca
agaaaaggacggagttcagtttctccaccgagatcatcaggtttaaaggccaagcctgga
agaagagccgactctcctgtgaagcccagacactcagaggagtctgagtcagaggaggat
aaaaatgacaaaggggcaacagcagattcagtgcagcagcgacgtcagtatcgcaggcag
aatcaacaatcgtcctcagatactgggtcttcatcttcagaggatgaagctcccaagagg
ccagcacctggggctgcggccagaaacggtgaagtcaggagaagacgaagtcgtacaccc
tcccctaggaggcgacatagagatccctctccaaggaaaagacgttctccgtctccaggg
cgcaggcgtcgcaccccttctcccccacggcggcgaagatctccctctcctccacgccgc
aggtctccatctccacctcctcgtcgtcgttcaccttcaccacgacggtactctccccct
atccagcgtcgctacagcccttcacctttgcctccgcagaaaagaaaaatgtccaactct
cccgcgaggcgtccttctccaggagcaaagcggcgtccgtccaggtcgcctaagcgcaga
agtcctcctttacatcgcagacgctcacctccgcggtcgtcatcgccacccagacacaga
aggagtccaatgcactctggctggcaaggcagggatacacggtcaccccctcgcatgtct
ccgtcccctgtaggccggggccgagctgctagggtttccaccagtccacagggtcgcttt
gagaaatccgtgtctcctaaccatcgcaagccacagtcacccatgcatagtaacaacaaa
ccaattcgtagggtttcccgcactccagagccacgcaaccagagagcttcagtgagtcct
cagcctatgagaaaagtatcttccagatctagatctgcgtctcctcaaccagcagctcaa
aaacgcccacttccggcttcagcttcccgctcaccgtctcgctccaccagcaggtcacca
cctccagccaaaaagcccagcagtgcttccctcagtcgctctccaagcaagacttctgac
attgatggcagtggaaagaaaaagaagaagaagaaggaaaagaaacataagaaggagaag
aaacacaagaaacacaagaagcataagagggagaagatcggtggaactggcaccaccgcc
gctgccgctgcagccggtggtggtggtggtggcactggtactggagatgaacaagaaaac
caggccacggagcaggacggagattctagaaagatgttgtag
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