Cynoglossus semilaevis (tongue sole): 103382343
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Entry
103382343 CDS
T04866
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csem01002
]
103382343 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csem04121
]
103382343 (usp42)
Enzymes [BR:
csem01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103382343 (usp42)
Peptidases and inhibitors [BR:
csem01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103382343 (usp42)
Ubiquitin system [BR:
csem04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103382343 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
103382343
NCBI-ProteinID:
XP_008313326
UniProt:
A0A3P8UCY5
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All DBs
Position
8:13219990..13230579
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AA seq
1191 aa
AA seq
DB search
MMTIVDRSSDKSDYQSVGFKRSPFNSRDLAMDGSCSSSWVVGPTMPSDSQRLRAPGSCLG
PTPGAAVYNSTPSSVDRPKEQVMHSGDGIESPQRVLFPLEKLSLKWTQIHRVGAGLQNMG
NTCFLNSALQCLTYIPPFANYMLTREHSKTCHEPGFCMMCTMQNHITQVFANSGNVIKPI
GVLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGPKLDRQTQATTFIHQVFGGYL
RSRVKCLNCKAVSDTFDPFLDIALEIKMAPSITKALELFVEPEQLDGENAYKCSKCKKMV
TASKRFTIHRNPNVLTLALKRFANFTGGKITKDVKYPEYLDLRPFMSQSQGESQVYALYA
VLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRSVLNCSEQAYVLFYVKSSDVK
KAGDYSHVSVHSGVPGHSSPRPVATPRINTAVHHHNNNNNSGFIGPQLPPHMTKSTLHVN
GNGSLSDYPSSSKSSSTSGKPSHGPPSSSTVSHSISRPSIIPDQDKRQKLSFFIGHNKQN
RSSSSASSSSSSSSSSTSSHSHPPSFSSSSSSSSCSNFSSSQSTSNVQFVPRQLNHTNGV
SCSNGGHHAAGNGSSLLVPYSQESSEDSDQEISGTVDKSSSKLNGKNGRGGIFEKSPQPK
ELGVNHIGNGFNGSMNGVSKLGQNGNHCGQHKINGHTSSFEQISATLSSAALSSSTDADA
DYNQPSKETSNSSRSQGLQSAASESQHLSTFPRAKPVSEPPPQHTGSSTVSVSPSASATV
TGTHSVPSSPPTHNGNPAALTTSSDDGTPATPQKVNGAASKAKDPPQTNGSSEGTEGQEV
TKEQLHSKSGFRSSERRSSRDRDRLNSEKSRDRERHYRDRSHNRDSDGDRYYHRRDYRDQ
RNHYRSNKVRWPSHSRHTRDDDRYNKDDRYYRDEYYHSSQTYYHPRERDRDRCAHHYHYE
KPREDWDSDRRGRGYSHYEECRSSGRLCDDGRESRVLHEKSNGRASERLKGSPPRGHTAS
RSAPNSDDHDHKRTGECRSKDSDYMSEARYCKKTKKSKKKKKSKDKDRSYSSSETDSDKS
DTTRKKKKKSKRQWDSQSPGAKRSRRSKSREQREWEREKESCSRRYHNDSDGFSPTKWQH
MDNADASSDHPPASHSGISNGSTYPNLNGHTGNGYIRTNGNTHKFSSGLKH
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccatagttgacagatcttcagataagtctgactaccagtcagtgggctttaag
cggtcccccttcaacagtagagatttggcaatggatgggagctgttctagcagctgggtg
gtgggacccaccatgcccagtgactctcagaggctgagggctccaggcagttgtctgggt
ccaacacctggagctgctgtctacaatagtactccttcctctgtggacagacccaaggag
caagtgatgcatagtggtgatggcatcgagtcacctcagagggtcctgttccctctggag
aagctcagcctgaagtggacacagattcatcgtgtgggtgcaggtctgcagaacatgggg
aacacctgcttcctcaattcagccctgcagtgtctgacctacatcccaccgtttgctaac
tacatgctgacacgggagcactctaaaacatgtcatgagcctggcttctgtatgatgtgc
accatgcaaaaccacattacccaagtgtttgcaaattctggaaatgtcattaagcccatc
ggtgtgctcaatgaactcaaaaggatagcaaagcacttccgctacggaagccaagaggat
gcccacgagttcctgcggtacacggtggatgctatgcaaaagtcctgtttacctggaccc
aaattggacaggcaaacacaggcaactacttttatccaccaagtgtttggtgggtacctt
cggtccagagttaaatgtttaaactgcaaagcggtttctgacacatttgacccctttttg
gatattgctctagaaataaagatggctcccagcatcaccaaagctctggagctgtttgtc
gagccagaacagctggatggtgaaaatgcctacaagtgctcaaagtgcaaaaaaatggtg
acagcctcaaagagatttaccatccaccgcaaccctaatgtcctcaccctcgcacttaag
cgttttgcaaatttcaccggaggcaaaattacaaaggatgtgaagtatccagagtatcta
gatctacgtcccttcatgtctcagtcccagggagagtcccaggtttacgctctgtacgct
gtgctggtccactctgggttcagctgtcatgctggacattacttctgctatattaaggcg
agtaatggccagtggtatcaaatgaacgactcctccgtgtctgtcagcgatatcaggtct
gttctgaactgttctgagcaggcctacgtcctcttctacgtcaaatccagtgatgtgaaa
aaagcaggcgactacagccatgtgagtgtccactcaggagtgcccggtcactcctctcca
cggcctgtggcgacaccacgcatcaacaccgccgtccaccaccacaacaacaacaacaac
agtggctttattggtccacagctgccccctcacatgactaagagtacactccatgtgaat
gggaatggatctctgagtgactatccttccagctccaagtccagcagcaccagtgggaaa
cccagtcatggaccaccctcttcctccaccgtctcccactccatcagtcgtccctcaata
atccccgaccaggacaaacgccagaagctctcattcttcattggacataacaagcagaac
cgctcgtcttcttcggcctcgtcctcttccagttcctcttcttcctccacatcttctcac
agtcatccaccttccttctcctcctccagcagcagctcctcctgcagcaacttttcctcc
tcacagtctacctcaaatgttcagtttgttcctcgtcagctgaaccacactaatggcgtg
tcgtgcagtaatggaggtcaccacgctgcaggaaacggatcatcacttctggttccctat
agtcaggaatcctcagaggattctgatcaggagatcagtggcactgtggacaaaagttcc
tcaaagttgaatggaaagaacgggagagggggtatctttgaaaagtctccacagccaaag
gaattgggagttaaccatataggaaatggattcaatgggtcaatgaacggagtctcaaag
ttaggacaaaatggaaaccattgtggacagcataaaatcaatggacacacctcatccttt
gagcagatttctgccactctgtcctcagctgctttgtcttcttccactgatgctgatgcc
gattataaccaaccaagtaaagaaaccagtaattcatccaggtcccagggcctccagtct
gctgccagtgaaagccagcacctgtccacttttccaagggctaaacctgtatctgaacct
ccgcctcagcacacaggatcctccaccgtcagtgtctcaccttcagcctctgctacagtc
acaggcacccactctgttccatcatctcctccaactcacaacggcaaccctgcggcctta
acaacatcatcagacgatggaactcctgctactccacaaaaggttaacggagctgcgagt
aaggccaaagatccaccacagacaaatggatcctcagaaggcaccgaaggacaagaggtc
accaaggagcagctccattccaagtccggtttccgaagcagcgagagacgtagttctcga
gacagagacagactgaactctgagaagagcagagacagggagagacattacagggacagg
agtcacaacagagacagtgacggggatcgctactatcacaggcgtgactacagagatcag
cgcaaccactaccgctcaaacaaagtccgatggccttctcacagtcgacacactagggat
gacgatcgttacaacaaggacgaccgctactacagggacgagtattatcattcttcacag
acttactaccatcccagggaacgggaccgggacaggtgtgctcaccattatcattatgaa
aaacccagagaggactgggacagtgacaggagggggcgggggtattcccattatgaggag
tgtcgcagctcaggacgcttgtgcgacgacggtcgggagtctcgggtgctccatgaaaag
agcaacggcagggcgtcagaaaggttgaagggatcacctccccggggtcacactgcatct
agatcagcaccgaactcagatgaccatgatcacaagaggacgggtgaatgtcggagcaaa
gacagtgactacatgtcggaggcccgttactgtaaaaaaacaaaaaagagcaagaaaaag
aagaagtcaaaggataaagacaggagctacagcagctctgagacagattcagacaaatct
gacactacaagaaagaaaaagaagaaaagcaagaggcagtgggacagccagagcccagga
gccaaacggagccgcaggagtaagagcagggagcaaagagagtgggagcgggagaaggag
agctgcagcagacgttaccacaacgacagcgacggcttttctcccacaaagtggcagcac
atggacaatgctgatgccagcagtgaccaccctcctgcctcccactctggaataagcaac
ggttcaacttaccccaacctcaacggccacacaggaaacggttacattcgaaccaacggt
aacacccacaaattctccagtggcctgaaacactga
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