Cynoglossus semilaevis (tongue sole): 103382800
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Entry
103382800 CDS
T04866
Symbol
dcp1b
Name
(RefSeq) mRNA-decapping enzyme 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103382800 (dcp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103382800 (dcp1b)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103382800 (dcp1b)
mRNA degradation factors
5'-3' decay
Decapping complex
103382800 (dcp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
103382800
NCBI-ProteinID:
XP_008313941
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All DBs
Position
8:complement(22594678..22604951)
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AA seq
677 aa
AA seq
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MTATSAGNSSGCLSAKGLDISLAALKRQDPYINNIMDVASQVALYTYNNRANEWEKTEVE
GTLFIYTRLASPRHGFTIMNRLSMENLTEPITKDLDFQLQDPFLLYRNARLIIHGIWFYD
KEDCQRIAQRMKNLTQQELVQAQTQGSWPSPAVGGGGGGVGVVVVGAGGGGDSGRGDGDG
KAVDIIQMLTKARTEFDKGNSSSEPKEIGGSSVIYGNPNLIKPIPVKPNTQEGEVAEPKP
LSLATLFGSQHQHQHQHQHSPKPVTATSLEDLGSAAGKGTRPPVARTLTYDGTLMTSGRS
GIPIGGSAALSGNIEGGSRAVSGKEGRNVAGLLPSASTSSPQQQQQQHCPAIQKLMQGQR
VGGGALQTLSESPENRLCDNGVPLEHHHHHHPHPNQHHHHHHHHHLQQQQQQQQQQFHSD
PIKRLFQAQSLLPPSSASFTSPAGPCCPNPASLPPLQQSPHQTTMVDSCLHLQAQQNQQM
CFSLTKPQVEAQTSIQSASTLQGAGLLLSQVTNDQVIQPPQGLSSQMIGVVSPHELLQKL
QLLPPRFLAPAQSQSPGSVVPPAQNQIPANANQKAGLQFQVISPQRIPATVAPSLLLSPS
VFSQAKPSSGLSVVAQENCPAPPLLPTAPQHEEAQILSRSQLQATLLHLIQTDSSFLDTI
HKAYISCFTPSSGAKYQ
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacttctgcaggcaacagcagcggctgtctttccgcaaagggacttgatata
agtctggctgctctgaagcgacaagacccatatatcaacaacatcatggacgtggccagt
caagttgctctttacacatataacaacagagccaatgagtgggagaagactgaagtggaa
ggaacacttttcatctacacaagactggcgtcacccagacatggtttcaccataatgaac
agactcagcatggagaacttaacagagcccatcaccaaggacctggatttccagctgcag
gatcccttcctgttgtaccgtaatgctcgattgattatccatggcatttggttctatgat
aaggaagattgtcagcgcattgcccagagaatgaaaaatctgacccagcaggagctggtc
caggctcagactcagggcagctggccatccccggcagtaggaggaggtggaggaggagta
ggagtggtcgtcgtaggtgcaggaggaggtggtgacagtggaagaggtgacggcgatggg
aaggcagtcgacatcatccagatgctcacgaaagctcgaacagagtttgacaagggaaat
tcatcttcagagccaaaggagattggtggcagcagtgtcatatacggaaaccccaacctg
atcaaaccaatacctgtaaaaccaaacactcaggaaggtgaagttgctgaacccaagcct
ctgtctctggccactctctttggctcccagcatcagcatcagcatcaacatcaacactca
cctaaacctgttactgccacatctttggaggacttagggtccgcagcagggaaaggcacc
cgcccacctgttgctcgaactttgacctatgatggcactctaatgacctctggaagaagt
gggattcccataggaggaagtgctgccctgagtggaaatatagagggaggaagcagagct
gttagtgggaaggagggtagaaatgttgccggcctgcttcctagtgcctccacctcatct
cctcagcagcagcagcaacaacattgcccagccatccagaagctgatgcagggacaaaga
gtgggtggaggtgccctccagactctgtctgagtcccctgagaacaggctctgtgacaat
ggagtgccactggagcaccaccatcatcaccatcctcaccctaatcagcaccatcaccac
catcatcatcatcaccttcagcagcagcagcagcagcaacaacaacaatttcactctgac
ccaatcaagagactctttcaagcccagtcacttcttcctccctcctctgcctccttcact
tctcctgctggtccttgttgccccaatcccgcttcactgccccctctgcagcagagcccc
catcagaccacaatggtggattcatgtttacaccttcaagcacaacaaaaccagcagatg
tgtttcagcctgacgaagcctcaggtagaggctcagaccagcatccaatcagcttcaact
ttgcaaggagcaggtttgctcctgtctcaggtgacaaatgaccaagtcattcagcctcca
caaggcctgtcttctcagatgatcggcgtggtgtctcctcacgagctcctccaaaagctc
cagttgttgccccctcgattcttggctcccgctcagagccagagtcctggctcagttgta
cctccagctcaaaatcagattccagccaatgcaaatcaaaaggctggcctgcagtttcag
gtcatctctccccagcgaataccggcaactgttgccccctccctgctcctttctcccagt
gtgttctctcaagcgaagcccagcagtggtctgtcagtggttgcccaggagaactgcccg
gcccccccactcctgcccactgcccctcaacatgaggaagcccaaattctgtccagatcc
caactccaggccacgctgctgcatctgatccagactgacagctcgttcctggacaccatc
cacaaagcctacatcagctgctttactcccagctccggtgccaaataccaatga
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