Cynoglossus semilaevis (tongue sole): 103382809
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Entry
103382809 CDS
T04866
Symbol
smo
Name
(RefSeq) smoothened homolog isoform X1
KO
K06226
smoothened
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
103382809 (smo)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
csem04030
]
103382809 (smo)
G protein-coupled receptors [BR:
csem04030
]
Frizzled / Smoothened family
103382809 (smo)
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Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
DUF6312
Motif
Other DBs
NCBI-GeneID:
103382809
NCBI-ProteinID:
XP_008313951
UniProt:
A0A3P8VM23
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Position
8:22797023..22803148
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AA seq
819 aa
AA seq
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MSSHSRSPIVGFYWLLCVLAAWLSGCGAMLSHNGTMFEDKCKKTTTCEVLKYNSCLGSPL
PYTHTSLVLAEDSSTQEEAFEKLTMWSGLRNAPRCWSVIQPLLCAVYMPKCENGQVELPS
KSLCMATRRPCSIVDRERGWPNFLRCDEFPVGCSNEVQKLKFNTSGQCEAPLVKTDIQSS
WYKDVEGCGIQCDNPLFTESEHNDMHIYIAYFGTITLLCTFFTLATFLADWKNSNRYPAV
ILFYINACFFVGSIGWLAQFLDGARKEIVCKSDNTMRLGEPSSSETLSCVTIFIIVYYSM
MSGVIWFVMLTYAWHTSFKALGTTHQPLSGKTSYFHMVTWSIPFILTVAILAIAEVDGDS
VSGICFVGYKNYKYRAGFVLAPIGVVLVVGGYFLIRGVMTLFSIKSNHPGLLSEKAASKI
NETMLRLGIFGFLAFGFVFITFGCHFYDFFSQAEWERSFREYVLCEANVTIASQTNKPIP
ECTIKNRPSLLVEKINLFSMFGTGIAMSTWVWTKATILIWKRTWCRIIGRSDDEPKRIKK
SKMIAKAFAMRKELHKDPEKELSFSMHTVSHEGPVAGINFDLNEPSNDMSSAWAQHVTKM
VARRGAILPQDISVTPTGTPVPPPEERNRLWMVEAEISPEMIKRKKKKKKRKKEVRPLNE
AVDHQAYAQREFGRSSVPRLPKLPCHPSLVANLQEQQMQEEEVLPGSYSEFQTSHPLSFE
ERCPYPLYQGSRSNYGRNLPSHRLALSDRPEDLGLGPRCPPSTSTWHPTGSSYYPQEVDV
TGRLVNVARMPAGRRTGNGPIHSRTNLMEAELMDADSDF
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccacagtcggagtcccattgttggattttactggctgctgtgcgtcctggct
gcctggctctcaggctgcggggcaatgttgtctcataacgggacaatgtttgaggacaaa
tgcaagaaaacgacaacttgtgaggttcttaaatacaactcgtgcctgggatcgccttta
ccgtacacacacacctccctggtcctggccgaggactccagcacccaagaagaagctttt
gagaagttgaccatgtggtccggtctaagaaacgctcctcgctgttggtccgtcattcag
ccactgctgtgtgctgtctacatgcccaaatgtgagaatggtcaggtggagctgcccagc
aagagcctgtgtatggccacacgtcggccgtgcagcatcgtggaccgggagagaggctgg
cccaacttcctcagatgtgacgaatttcctgttggatgttcgaatgaagtgcagaagctg
aagtttaacacttcaggtcagtgtgaagctccgctggtgaagacggacattcagtccagt
tggtacaaagacgtggaaggctgcggtatccagtgtgacaaccctctctttactgagtcg
gagcacaacgacatgcacatctacatcgcgtactttggcaccatcacactcctctgcacc
ttcttcaccctggccacattcctcgcagactggaagaattccaaccggtatcccgctgtc
attctcttctacatcaatgcctgcttctttgtgggcagcattggctggctggcccagttc
ctggatggtgcccgcaaagagatcgtgtgcaagagtgacaacacaatgcgtctcggggag
ccatcatcttcagagacgctgtcgtgcgtcaccatcttcatcatcgtctactactccatg
atgtcaggtgtgatttggtttgtgatgctcacctacgcctggcacacgtcctttaaagcc
ctgggcaccacccaccagccgctgtccggcaaaacctcctatttccacatggtgacctgg
tccattcccttcatcctcactgtggccattctggctatcgctgaggtggatggagactca
gtgagtggcatttgtttcgtgggctacaaaaactacaaatacagggccggcttcgtcctg
gcccccattggtgttgtgctggtcgttggtggttacttcttgatccgaggggtcatgacc
ttgttttccatcaagagtaaccacccaggtctactgagtgagaaagcagccagcaaaatc
aatgagaccatgctgcgactcggtatttttgggtttctggctttcggatttgtcttcatc
acttttggctgccacttctacgacttcttcagccaggctgagtgggagcggagcttcaga
gaatatgtgctgtgtgaagccaacgtgacaattgcatcacagaccaacaagcccatcccg
gaatgcaccatcaaaaaccgtcccagcctcttggtggaaaaaattaacctgttctccatg
tttggcaccggaatcgctatgagcacctgggtctggaccaaagccactatcctcatctgg
aaacgcacctggtgcaggattattggccggagcgacgacgagcccaaaaggatcaagaag
agcaagatgatcgccaaggcattcgcaatgaggaaagagctccacaaggaccctgaaaag
gagctgtcattcagcatgcacactgtgtcacatgaaggtccagtggctggaattaatttt
gatttgaatgaaccgtccaatgacatgtcatcagcctgggcacaacatgtgactaagatg
gtggcgcgacgaggtgccatcttgccccaggacatttctgttacacctaccggtacacca
gtgccacctcctgaggagaggaatcgactctggatggtggaggctgagatttcaccggag
atgataaagaggaagaagaagaaaaagaagaggaaaaaggaagtgcgtcctctgaacgag
gcggtcgaccatcaggcgtatgctcagcgggagtttggccgcagctcggtgcctcgtctg
cccaaactgccctgccaccccagcctggtcgctaacctacaggagcagcagatgcaggaa
gaggaagttctgccaggatcgtactcggagtttcaaacctcacaccctctgtcctttgag
gagagatgcccatacccgctgtaccagggcagccggagcaactacggccgcaatctgccg
tctcatcgtttggccctcagtgatcgtccagaggatctgggtctcggcccgcgctgtcct
ccttcaacttccacctggcaccccactggatcctcctactacccccaggaggtggatgtt
acagggaggttggtgaatgtggcccgaatgccagcaggcaggaggactggaaatggtccg
atccactccaggaccaatttgatggaggcagagcttatggacgcagactccgatttttaa
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