Cynoglossus semilaevis (tongue sole): 103382859
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Entry
103382859 CDS
T04866
Symbol
pdzrn4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csem04121
]
103382859 (pdzrn4)
Enzymes [BR:
csem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103382859 (pdzrn4)
Ubiquitin system [BR:
csem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
103382859 (pdzrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
103382859
NCBI-ProteinID:
XP_008314013
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All DBs
Position
8:complement(24205105..24219811)
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AA seq
813 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGRDFSKVEHDQAVVEAIRRDPIVVQVLRRTPNGAA
TAAVAHNLGGTSEDVCVVDVCTQTDITFEHIMALAKHRATTPPVPDICPFLLSDSCHSIH
TMEHEFYECPEYLSNTQAEVERTEEFEYEVLGELCRQNSQEKLGLTLCYRTDDEEDTSIY
VSQVEPNSIAAKDGRIREGDRILQINGCEVRDREKAVALLSSEEARSIVLLVTRPEIQLE
EEVWLDDEQQELVEELKMELLEERRKKEQRFDRGDEHQADEEMTTDTATCSSINQDSGLG
RSTDSPDHQPLLARLHRRSPARCLRDRWRAEHPHTRAGTDDPQGLHSQRTPSKGQGHEAM
VSIPSSGGGILGLENCFQQLLELKCQIRNGGECGVYSIRHSIECSLTEKGSGDGDGVDSE
GEGSGVEHELKMLNEELRSIELECQSIMQAHQLRQTLDSTPCSPGRSPKDGHKLHSRLAD
IHEHPESDKIREKDSSSAYNTAESARSTPLGMERSPDHSLQRHIAITNQKNLRLASSTPS
CPIPIPKPHGTPSRSRPAEPGLVISSSPDQSNQSRSESDPALPADDERCEKKGRSRESRR
ALPYGCSYQTSPYSGPGGSRQLQSYMQLLQQHSSLEYSQSQLSLLSVCRDPVHRSGRPGE
PRLEWKVKVRADGTRYVARRPARDRILRERALRIREERSGGMTTDDDAMSEMKMGRYWSK
EERKQHLARAREQRKRREFMQKSRLECLKEGTASGAEGKKEINILELSHKKMMKKRNKKI
LDNWMTIQELMSHGARVPESSKVHNAFLSVTTV
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatttgtgcaccttgcagaaacgggaggaacactacaaactgctgtacgag
attgcacaggtgaatgggcgagacttctccaaggttgaacatgaccaggctgtggtggag
gccatcaggagagaccccatcgtggtccaggtcctgcgccggacccctaacggggctgcc
acggctgcagtcgctcacaaccttggcggcacatcggaggacgtgtgtgtcgtggacgtt
tgcacacaaaccgacatcaccttcgaacacatcatggcgctggccaagcaccgagccact
acccctcccgtccctgacatctgccccttccttttgtctgacagctgccattccatccac
accatggaacacgagttttacgagtgtcccgagtacttgtccaacacccaggcagaggtg
gagaggacggaggagtttgagtatgaggtacttggggaactgtgccgacagaatagccag
gagaagcttggactgacgctgtgctacaggactgacgatgaggaggacaccagcatctac
gtcagccaggtggaaccaaacagtatagcagcaaaggatggacgcatcagggaaggagac
cgtattttacagataaatgggtgcgaggtgcgagacagggagaaagccgttgccttgttg
tcaagtgaagaagcaaggagcatcgtactgctggtgacaagacccgaaatccagctggag
gaggaggtatggctggatgatgagcagcaggagctggtggaggagctgaagatggagctt
ctggaggagaggagaaagaaagagcagcgctttgacagaggagacgagcatcaagctgat
gaagaaatgacaacagacacagctacatgttcctccatcaaccaagacagtggcttagga
cgcagcacagacagtcctgaccatcaacccttgctggccaggctccacagaagaagcccc
gcccgttgcctcagggaccgatggagggcagagcatccacacacgagggcagggacagat
gatccacagggcctccacagtcaaaggactccgtctaaaggccagggccacgaggccatg
gttagtatccctagtagcggaggcgggatcctcggcttagagaactgctttcagcaactg
ctggaactgaagtgtcaaatacgaaatggaggggagtgcggggtgtattccatccgacac
agcatagagtgcagccttacggaaaaaggcagcggggatggggacggtgtggatagcgaa
ggagaagggagtggggtggagcatgagttaaagatgctcaatgaggaactgagaagcatc
gagctggaatgtcagagcatcatgcaggcacatcaactccgccagactttagactccact
ccctgctcaccaggacggagccctaaggatgggcacaaactgcacagcaggttggccgac
atccatgaacacccagagagtgacaagatccgggagaaggacagctccagtgcctacaac
acagcagagagtgccaggtccacaccgctcggtatggaacgctctccggaccactcttta
caaagacacatcgccatcaccaaccagaaaaacctcagactggcctcgtccacaccctcc
tgcccaatccccatccctaagcctcatggtacacccagtcgtagcagaccagcagagcca
ggactcgttatctccagcagccctgaccagagcaaccaatccaggtcggagtcagaccct
gccctacccgcagatgacgagaggtgtgagaagaaaggtaggagcagggaatccaggaga
gcacttccatatggctgttcgtaccaaacaagtccttattcaggcccaggaggatccagg
caactccagagctacatgcagctgctccagcagcactcctccctggagtactcccagagc
cagctgagtctgctcagtgtctgccgcgatccggtgcacaggagcggacgccctggggaa
ccgcgtctggaatggaaggtcaaagtgcgcgcagacggtacacgctacgtggcccgtagg
ccggcgcgtgatcgcatcctgagggaacgggcgctcaggatcagggaggagagaagcgga
ggcatgaccacggacgacgacgctatgagtgaaatgaagatgggccgatactggagcaaa
gaggagcgaaagcagcacttggcccgggccagggagcagaggaagaggagggagttcatg
cagaaaagccgcttagagtgtctgaaggagggcacggccagcggagccgagggcaagaag
gagatcaatatcttagagctcagtcacaaaaagatgatgaagaaacggaacaaaaagatc
ctcgacaactggatgaccatccaggagttaatgagccacggagccagagttcctgagagc
tcgaaagtccacaacgccttcttgtccgtcacaactgtctaa
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