Cynoglossus semilaevis (tongue sole): 103382951
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Entry
103382951 CDS
T04866
Symbol
utp20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csem03009
]
103382951 (utp20)
Ribosome biogenesis [BR:
csem03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
103382951 (utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
CCD97-like_C
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
103382951
NCBI-ProteinID:
XP_008314156
LinkDB
All DBs
Position
8:27448319..27470470
Genome browser
AA seq
2814 aa
AA seq
DB search
MKLKSKSSYHKSENTYRFLTFAERLANVNIDVIHRIDRIGSFAEEVETYFFEGLTKWRDL
NLTQQFTTFLKEVSNKSQSFNMLVFHQKSIVECLKTNLAVKDSLASQPLLDLVVQLARDL
QTDFYPHFPDFFVLITSLLDTKDTEVLEWAFTCLSYLYKYLWRLMVKDMTNIYSLYSTLL
AHKKDHIRKFAAESFSFLMRKVPDFDGLLDLMFSDLQRHPDKAEGVGQLLFEMCKGVRNM
FHSVAARAFPAALRKLGPLTNPDVCLPWDTVRDALDHMAQAAADYVDKEHFLVLWESVQA
SVLQVLCVVEEKGEKAHEATEQLERLLFILHTLVSHRNGSKVTKPESLCQVLLQLIQSSA
LSVPCSRLLLQIVSSLLLGENITLPAPLIQGTIQKIFGSTMGQDLILEFTKEMFTMKQFE
QLFLPSLLRFSAGLVLSEDAPSRHSGLEVLVQLILSKAPPPTDGSMAFETYPLLFTGLNA
GRNPGQTSGTTPQQASVPELVLSLINLPEEQKEPITDLSLPWSALILLPHLRPQSPVTVV
PGVSALLNHLLSQIHEGNFGKAALFVARQALSCLLSLDGSAQLLSLVTVDKVTSILRKFP
TDLSALLVGDLYYTHLSLSGVSEHLSHSALQELYHILQPNLSSNVSKIRLLTLRILSQFE
AELPAQPEAEDSVDVQPVFAVCLQAELVPASVQDYREKLLHLRKLRHDLVQRSLPQGPSA
TFQQVPLRFLIAMLFVNFRPLWDAVIDLIVSHARGMDNKDFWVIYYEHLEMVAGLAEKEL
REDDEDDVSDDEDGSSGRPEPGCDVIESGDVGVLFLEQLKSTNQSNDRTDFPNFRSLLWR
TMTKCPDRVEPRSRELSPLLLRFVRNEFYPADLMVAPTQDLRKKSDAAPEDADMTVDEEE
EEEEEEERGQQQTKGVSRRAAARQLIAHLKVFAQFTNPCSLYLESQLSELYNQLLCHQDQ
QIQRVALECVLTYKDSNIVPYKENLERLLDDKHFKEEIVHFNISEETGVVDASHRARLIP
LLMRILFGRLRSKAGSKFQGKSSAATRSSIILRFLAGCQTEELEMFISLLLEPVSHYCQG
SCLASVEKAVADTDPGAVLPLGRQHSLLNIINVVLQKLGHLIDIYLPRVLRILLCVTASV
STLLDNREQLRPGCISPLKNLRRLGVLRIYDFFEGFDSYSFSPDELDAVFQAVVWPQVCR
LPTESPYSPTPLLKLIHVWCKHSRYFPLLAKQRPDHPECDVLLNVFALLFAKNASTATVA
MVMDVAESLATTEDFVASESETELSVNNGVFPQPAEGALVTAESLSQGFRLLLPHISVVL
NYFSTTVCSTDRLKKKKFRAHVAKELNILSKISRFVSSRDQSSVLIRLLLPYLHKGHNAP
ETEMDILATVQNLLQQCVQPSAFLRPLSKLFSVIHNKLPRQALTSVFQTLSDLEPSLNYI
TDLAAKLNAFDSRHLDEVHYDVRLTAFQDATRKVREMRTLDLDFIGTIIHNCFHTYEIGD
MSLADNATLCLSAVITQVAEVNAGEQIYRDVIQHTVLDAVLKGLRSKNDRVQHEYTTVLA
CLVKTFPNRKEFKDLVQLTDYNDPESDFFEHMKHIQIHRRARALRRLAKQLTEDKVMISP
RSLQNYVMPYAMTALFDEKMLKHENMTSASVEVVGAVCRKLTWSKYLYYLKHFVHVLQTS
QAEQKLGVTLLVTVLEAFHFDHQTLSREIEAAKAREEAARVQVDQQGAEDAAADESDASD
DEEPMEIDGKAAAATVSMEVDNVEDHKGVSEDAAAAKNKKAAPVKPSVGVSGLPQSQEEL
EYLIKTIHQTVNDSVLPRLQKCLTAKVTRDEEHKSIKSKAVKEEEVVRIPIAFAMVKLMQ
TLPPHIMEGNLPGILIKVCVLLRNRFQEVRDVARGTLVKIVETLGCRYLQYLLKEMQGIL
VKGYQVHVLTFTVYNLLSVLSPTLKPGDLDPCMNMLISIFNNELFGAVAEEKEVKGIVSK
LMEARHSKSMDSYELLAKFCSRDSITKLMLPLKEILETTSSLKVCNRVSAVLRRLVLGLL
ANEGMTAQDILLLSHSLVSQSLPLVTKKDRQKSAAQAPPDPRLPPPSCLLLPPTPKRGEQ
KARVSSRTNMHILVDTGLKLLHLSLKKSKVTSSEASALEMLDPFIQLMLDCLDSMHVKVI
TEALVCFTFLLKFPLPAVEKNSEQLTKKLFVLLKDFSKAGAARGENYHLVQSCFKAITTL
VKNFKNSNITEVRLRVLLGYAEEDIYDQSRQATAFGLLKVILSRKLVVPEMEELMKKVSK
LSITGSNSMIRIHCRQIFLKYLLDYPLGKKLRGHLDFVVAQLQYEHDTGRESVLEMLAYI
FQTFPQNLLLQHSGLFFAPLALSVVNDDSARCKKMAALAIKALLAKLDLNHQNILFSLVN
TWLNSEKSNLRRLGALICGLFVEVEQEKFVQRLDTLLPLLEREIHPDNYEDIEEEQEEKG
ADRLLFSHLTLVTKLVQHCGLLELQKPRDTLLSIWGHIEAHLSYPHCWVWLTASQLFGQL
FAAQQAEQLVSRWRGEAADVSPPSVATVFITTNLDKKMRQLALTLCHQLQSKFLDTASGE
QVIKNLLFVGKVIYLLSPESEVTAEQEEEEEEEEEGKVEEPEENGKDEQEEEEEEEKEEK
EDNRPPSLLWLMRKLSLMAKREAAHSPKVPLKRTCVFKFLGATAMDLGAERLGPYLTTII
APLYRELDSTYADQDPTLKNLAQELIELLKKQVGLETFSLAFSAVQKEFSKRRAARKRHR
AVQAVANPEVAAKKKLKKHKNKIEAKKRKIEFLRPGYKAKKHRSHALKDLAMVQ
NT seq
8445 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaaatccaagtcttcgtatcacaaatcggagaacacctaccggtttctcaca
tttgctgagagacttgccaatgtcaacatcgatgtcatccatcggattgacagaattgga
tcttttgctgaggaggtagaaacctacttttttgaaggtctgacaaaatggagggacctc
aacttgacccagcaattcacgacatttttgaaagaagtctcaaacaagagccagtctttc
aacatgctggttttccaccagaagtcaatcgtggagtgtctgaaaactaacctcgccgtc
aaagacagcctcgcctcccaaccactgctggatctggtggtccagctggctcgagacctg
cagacggatttctatcctcacttcccagacttctttgttctcattacctcacttttggac
actaaagacacagaggttctagaatgggccttcacctgtctctcctacctttacaagtat
ctgtggaggctcatggtgaaggacatgaccaacatctacagtttgtacagcacactgctg
gcacacaaaaaagaccacattcgcaaatttgcagcagagagtttctcttttttgatgaga
aaggtcccagacttcgacggcctgctggaccttatgttctcggacctgcagcggcatcct
gataaagcagagggcgtcggtcagctcctgtttgaaatgtgcaaaggtgtcaggaacatg
ttccactctgttgctgccagggcgttccccgcagctctgcgtaaacttggtccactgaca
aacccggacgtctgtttaccgtgggacacagtcagggacgctctggatcacatggcccag
gctgcagccgattatgttgacaaagaacacttcctggtcttatgggagtccgtgcaggcc
agtgtgctgcaggtcctgtgtgtcgtcgaggaaaagggagagaaagcccatgaggccaca
gagcagctggagcggctgctgttcatcctccacaccctggtgtctcacagaaacggatcc
aaagtcaccaagcctgagtcgctctgccaggtgttgctgcagttgatccagagctcagct
ctgtcagttccctgctcccgtctgctcctccagatcgtctcctctctgcttcttggggag
aacatcaccctccccgccccactgattcaaggcacaatacaaaagatctttggaagcaca
atgggccaagatctgattttggagttcactaaagaaatgttcaccatgaaacagtttgag
cagcttttcctccccagtctgctgcgtttttctgctgggctggtgctgagtgaagacgcc
ccgtctcgtcactcgggcctggaggtgttggtccaactcatcctctctaaagccccgccc
cccacagatggctccatggcctttgaaacctacccactgctgttcaccggactgaacgca
ggtcgaaacccaggacaaacgagtggtaccacaccacagcaggcatcagtaccagagctg
gtactgtctctgatcaatctccccgaggagcagaaggaaccaatcactgacctgtctctg
ccgtggtccgccctcatcctgctgccgcacctcagaccacaaagtccagtgactgttgtc
ccgggcgtcagcgctctgttgaaccacctgctgagtcagatccacgaaggaaactttgga
aaagctgctctgttcgtggcccgtcaggctctgagctgcctcctcagtctggacggctcg
gcccagctcctgtctctggtcaccgtggacaaggtcacgtccatcctcaggaagtttccc
acagacctgtcggccctgctggtgggagacctgtactacacccacctgtcgctcagcggc
gtttcagagcatctgtcccacagtgcactgcaggagctgtaccacatcctgcagcccaat
ctttcctccaatgtctctaagatccgcctcttgactctgaggatcctgtcgcagttcgaa
gcggagcttcctgcccagcctgaggccgaggacagcgtggacgtccagccggtgttcgcc
gtttgcctgcaggcagagttggtgccggcgtcggtgcaggactacagagaaaagctgctc
cacctgcggaagctgaggcacgacctggtgcagcgcagcctgccgcagggtcccagcgcc
acctttcagcaggttcctctgcgtttcctcatcgcgatgctctttgtcaacttcaggcct
ctgtgggacgccgtcattgaccttatagtgagccacgcccgggggatggacaacaaagac
ttctgggtaatctactacgaacacctagagatggttgctgggctggcagaaaaggagtta
cgagaggacgacgaagatgacgtcagcgatgacgaggacgggtccagtggacggcccgag
cccggctgtgatgtcattgaaagcggggacgtgggggtgctgtttctggagcagctgaag
tcgaccaaccagtccaacgacaggacagacttcccaaacttccgaagcctgctgtggcgc
accatgaccaagtgtccggaccgggtggagccacggagccgagaactgagtcctctgctg
ctccgcttcgtcaggaatgagttctacccggccgacctgatggtcgctccaacgcaggac
ctgaggaagaagagtgacgctgcaccagaggacgctgacatgactgtggacgaggaggag
gaagaggaggaggaggaggagagaggccagcaacaaaccaagggagtgtccaggagagca
gctgcaagacagctgattgctcatctgaaggtttttgcccagttcaccaacccgtgctct
ctttacctggagagccaactcagcgagctctataaccagctgctctgtcatcaggaccag
cagatccaacgagtggctctagaatgtgtcctcacctacaaagactccaacatcgtcccc
tacaaggagaatctggagagactgctggacgacaaacacttcaaggaggagatcgtccat
tttaacatttctgaagaaacaggagtcgtcgacgcttcccacagagccaggctcatccca
ctgctgatgaggatcctttttggacgtctgcgcagcaaagcaggaagtaagttccagggc
aaatcctcggcagccacccgctcctccatcattctgcgttttctggccggttgccaaacg
gaggagctggagatgttcatcagcctcctgctggagccggtgtctcattactgccaaggg
tcctgtctggcgtcggtggagaaagcggtcgcggacacagacccgggcgccgttctgccg
ctgggccgtcagcacagcctgttgaacatcatcaacgtggtgctccagaagttgggccac
ctcattgacatctacctgcccagggtgctgcggatcctgctgtgcgtcactgccagtgtg
tccacgctgctggacaacagggagcagctgaggcccggctgcatcagtcctctgaagaac
ctgaggcgactcggcgtcttgaggatctacgacttcttcgaaggcttcgactcctacagc
ttcagcccagatgagctggacgctgtgttccaggcggtggtctggcctcaggtgtgtcgt
ctgcccacagagagtccttactctcccactcctctgctcaaactgatccacgtgtggtgc
aaacattccaggtacttccctcttctggccaagcagagacccgaccacccggagtgcgac
gtcctcctgaacgtcttcgccctcctgtttgcaaagaacgcttccacggcgaccgttgcc
atggtcatggacgtcgccgagtctctggcgacgaccgaagactttgtggcttcggagtcc
gagacggagctgagcgttaacaacggcgtgttcccgcagcctgcagagggcgctctggtt
acagcagagtctttatcccagggcttcagactgctgctgcctcacatctctgtggtgctc
aactacttcagcaccaccgtctgcagcaccgacagactcaagaagaagaagttccgagcg
cacgtggccaaagagctcaacatcctctccaagataagtcggttcgtcagcagcagggat
cagagctcggtgctcatcaggctgctgctgccgtatctccacaaaggccacaacgctccg
gagacagagatggacatcctggccaccgtacagaatctgctgcagcagtgcgtccaaccc
tccgccttcctgcggcctctcagcaaactcttctccgttattcacaacaagctgccgaga
caggcgctcaccagcgtcttccagactctctcagatctggagccgtcgctcaactacatc
acagatttagcagcaaagctcaatgccttcgacagtcgacacttggatgaagttcactac
gacgtgcgtctcaccgccttccaagacgccaccaggaaggtcagggagatgcggaccctg
gacctggacttcatcggcaccatcatacacaactgtttccacacctacgagattggagac
atgtcgctggcagacaacgccaccttgtgtctgtctgcggtcatcacccaggtggcagaa
gtcaacgctggagaacaaatctacagggacgtcatccagcacacggtcctggacgccgtg
ctcaaaggactgcgtagtaaaaacgacagagtgcagcatgagtacaccaccgtgctggcc
tgcctggtgaagacgttccccaacaggaaggagttcaaagacctggtgcagctcacggat
tacaacgaccctgagtcggacttcttcgagcacatgaagcacatccagatccaccgtcgt
gctcgtgcactgaggaggttggccaagcagctgacggaggacaaggtcatgatttcccct
cgctccctgcagaactacgtgatgccgtacgccatgacggcgctgttcgatgagaagatg
ctgaagcatgagaacatgacctcagcctcggtggaggtggtgggcgccgtgtgtcgcaaa
ctgacctggtccaagtacctgtactacctcaaacactttgtccacgtcctgcagacgtca
caggccgagcagaaactgggcgtcactttgctggtcacggttctggaggcgttccatttt
gaccaccagacactcagcagagaaattgaggcggcgaaggccagagaagaagcggcaaga
gttcaagtcgaccagcagggggcagaggacgctgcagcagatgaatcagatgcaagcgat
gacgaggagccgatggagatagatggcaaggcggctgcggctactgtgtccatggaagtg
gacaacgtggaggaccacaaaggcgtctcggaggacgccgccgccgctaagaacaaaaaa
gcggcgcctgtgaaaccgtctgtaggggtcagcggactgccacagagtcaggaggagctg
gagtatctgataaaaaccatccaccagacggtcaacgacagcgtcctgcctcgtctgcag
aagtgtctcacggccaaggtgacacgtgacgaggagcacaagtccatcaagtccaaggcc
gtgaaagaggaggaggtggtgaggataccgatcgccttcgctatggtcaaactgatgcag
acgctccccccgcacatcatggagggcaacctgcccggaatcctcatcaaggtgtgtgtg
ctgctgaggaaccgattccaggaggtcagagatgtggccagaggaacgctggtgaaaatc
gtggagactctgggatgtcggtacctgcagtacctgctgaaggagatgcagggaatcctg
gtcaaggggtaccaggtccacgtgctaacattcaccgtctacaacctcctgtctgtgctc
agtcccactctgaagcccggtgatctggatccatgtatgaacatgctcatcagtatcttc
aacaacgagctgttcggcgccgtggccgaggaaaaggaagtgaaaggaatcgtctccaag
ctgatggaggctcgacacagcaagagcatggactcgtacgagctgctggccaagttctgc
agcagagacagcatcaccaagctcatgttgcccctgaaggagattctggagaccacgtcc
agtctgaaagtgtgtaaccgggtcagcgctgtgctgcggcggctagtcctgggtctactc
gcaaatgagggcatgaccgctcaggacatcctcctgttgagccacagtctggtcagccag
agtctgccgctggtcaccaagaaagaccgacagaagtctgctgcccaggccccccctgac
cccaggctgcccccgcccagctgcctcctcctgcccccaaccccaaagagaggtgaacag
aaggctcgggtcagcagccgaaccaacatgcacatcctggtggacactggactgaagctg
ctccacctgagtctgaagaagtctaaggtcacctcgtctgaggcttcagctctggagatg
ctggaccccttcatacagctgatgctggactgtctggactccatgcacgttaaggtgatc
actgaggccctggtctgcttcaccttcctgctcaagttcccgctgccggcggtggagaag
aactcggagcagctgaccaagaagctcttcgtcctgttgaaggacttctccaaggctgga
gcggctcgaggggagaactaccacctggtccagagctgcttcaaggccatcaccacgctg
gtgaagaacttcaagaacagcaacatcactgaggttcggctgcgggtgctgctgggatac
gccgaggaggacatttatgaccaatcacgtcaggccactgcctttggtctgctgaaggtg
attctgtccaggaaactggtggttccagagatggaggaactgatgaagaaagtgtccaaa
ctctccatcactggtagcaactccatgatcagaatccactgtcgacagatattcctgaag
tacctgctggactacccactggggaagaagctgagaggacacctggacttcgtggtggcc
cagctgcagtacgagcacgacacgggcagagagtcggtgctggagatgttggcgtacatc
ttccagacgttccctcagaatctgctgctacaacacagcggcctgttcttcgccccgctc
gccctgtccgtggtcaacgacgactcggctcgctgtaaaaaaatggccgccttggccatc
aaggctctgctcgccaagctggacctgaaccaccagaacatcctgttctcgctggtcaac
acgtggctcaactcagaaaagtccaacctgcggcgtctcggagccttgatctgtggcctg
tttgtggaagtggagcaggagaagttcgtccagaggctggacacactgctccccctgctg
gagagggagatccacccagacaattatgaagacatcgaagaggagcaggaggagaaagga
gctgataggctgttgttcagtcacctgaccctggtcaccaagctggtccagcactgtggt
ctgctggagctccagaaaccccgggacacgctcctcagcatctggggtcacatcgaagcc
cacctgagctaccctcactgctgggtgtggctgaccgcctcgcagctctttggtcagctg
ttcgcggcgcagcaggcggagcagctggtcagcaggtggagaggagaggctgcagatgtt
tctcctccgtccgtggccaccgtcttcatcaccaccaacctggacaagaagatgagacag
ttggcgttgacgctctgccatcagctgcagtccaagttcctggacacggcctcaggagag
caggtgatcaagaacctgctgttcgttggcaaagtcatctacctgctgtcccccgagtct
gaggtcacagctgaacaagaagaagaagaagaagaagaagaagaagggaaagtggaggag
ccagaggagaacggaaaggacgaacaggaggaggaggaggaggaggagaaggaggagaag
gaagacaaccgacctccgtcactgctctggttgatgaggaaactttctctgatggccaag
agagaagcagcccactctcctaaagttcctctgaagagaacgtgtgtcttcaagttcctg
ggagccacagccatggacctgggggcagagagactgggtccgtacctgaccaccatcatc
gcccccctctacagggagctggacagcacgtacgctgaccaagaccccaccctgaagaac
ctggctcaggagctcatcgagctgctgaagaagcaggtcggactggagacgttctctctc
gccttctctgccgttcagaaggagttctccaagcggcgagcagcgcgtaaacgccacagg
gccgtgcaggccgtcgccaacccggaggtcgccgccaagaagaaactcaagaaacacaag
aacaaaatagaagccaagaagaggaagatcgagttcctgcggccgggctacaaggctaag
aagcaccgcagccacgccctcaaagacctggccatggtgcagtga
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integrated database retrieval system
