Cynoglossus semilaevis (tongue sole): 103383084
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Entry
103383084 CDS
T04866
Symbol
apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103383084 (apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csem03400
]
103383084 (apex1)
Enzymes [BR:
csem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
103383084 (apex1)
DNA repair and recombination proteins [BR:
csem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
103383084 (apex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
103383084
NCBI-ProteinID:
XP_008314313
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Position
8:complement(29447002..29449558)
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AA seq
351 aa
AA seq
DB search
MCLGKGLQRSIWLVFASSRRRTNFVHFACLRSVFVDGRSLRMKRGKKAQEAAAEGSDDTT
SAPTKKAKNAKEPEAPVLYEDPPDQMTSKDGRQANMKITSWNVDGLRAWVKKNGLDWVRE
EDPDVLCLQETKCAEKDLPAQITEMPEYPHKYWASSDEKGGYSGVAMLCKTEPLKVTYGI
GKEEHDKEGRVITAEFDGFYLVTAYVPNASKGLVRLDYRKTWDVDFQSYLSELDIQKPVV
LCGDLNVAHQEIDLKNPKGNKKSPGFTPEEREGFSQLLEAGFVDSFRELYPEQTNAYTFW
TYMMNARTKNVGWRLDYFLLSSSLLPGLCDSKIRNKAMGSDHCPITLHMVV
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttggggaagggattacagaggagcatttggttggtctttgcatccagtcggaga
agaacgaactttgtgcattttgcttgtctgaggagtgtgtttgtagacggacggagttta
agaatgaagaggggcaagaaggcacaggaggctgctgcggagggaagtgacgacaccact
tctgcccccacaaagaaagccaagaatgcaaaggaaccagaagccccggttctctacgaa
gaccctccagaccaaatgaccagcaaagatggacgacaggccaacatgaagatcacctcc
tggaacgtcgatggcctgagggcctgggtgaaaaagaatggtctagattgggtccgtgag
gaggatccagacgttctctgcctccaagaaaccaaatgtgccgaaaaggaccttcccgca
cagataaccgagatgcccgagtacccacacaagtactgggccagctcagatgagaagggg
gggtacagtggggtggctatgctgtgcaagacggagcctctcaaagtaacatatggtatt
gggaaggaggagcacgacaaagagggccgcgtcatcaccgcggagttcgacggcttctac
ttggtgactgcgtatgtgccaaatgccagcaagggcctcgtgcgccttgattaccgtaaa
acctgggacgtggacttccagtcgtatttaagtgagctggacatccagaagcccgtggtg
ctctgtggagacctcaacgtcgcccaccaggagatcgatctgaaaaaccccaagggcaac
aagaaaagccccggcttcacacccgaggagcgggagggcttcagccagctgctggaggcg
ggtttcgtggacagcttccgcgagctgtaccctgagcagaccaacgcctacaccttctgg
acctacatgatgaacgcccgcaccaagaacgtgggctggaggctcgattactttttgttg
tcgtcgtcgctgctgccaggtctgtgtgacagcaagatccggaacaaggccatggggagt
gaccactgccccatcacactgcatatggtagtgtag
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