Cynoglossus semilaevis (tongue sole): 103383447
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Entry
103383447 CDS
T04866
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04010
MAPK signaling pathway
csem04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103383447
04020 Calcium signaling pathway
103383447
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csem04040
]
103383447
Ion channels [BR:
csem04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
103383447
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
103383447
NCBI-ProteinID:
XP_016890426
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All DBs
Position
9:3631807..3768229
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AA seq
2248 aa
AA seq
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MTSEEEEGPGVAASTPSGAAATSRVTRVAARGNNDDTVTSSSPRRPSPYRLPRPTEKEEE
EEEIEEEGIIQEDRIEEEEEEEVDCSRNNHEEEDDDDDDDEEANSDTSMLVVPYPELVPV
VFFCLKQTTCPRSLCIRLVCSPWFERVSMMVILLNCVTLGMYQPCENIDCSSEHCQVLQA
FDAFIYIFFALEMVIKMVALGIFGRRCYLGDTWNRLDFFIVMAGMVEYSLDLQNVNFTAI
RTVRVLRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRN
RCFLEENFTLTTGISLPRPYYIPDEDDERPFICSLPVDNGIMSCSDVPARREGGKTCCLD
KDDALYRQSLGLSPEPLVNGSVSVAGLCVNWNRYYTRCHTGHRNPHKGAINFDNIAYAWI
VIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRE
HQLMQEQRARFSSSSTLASEPGDCYEELFQLVCHLLRKARRQTVNFFNTLRGKPRGFRGV
GRGRGRGEGRERKANGRGGRERRAVTRHGPPCPHHSKPDHSASGQPAALAAAPPSDGCPR
CAAALALTDGVGPVRSAAGGETEEGGVEEADREGGQSGANEKSGGEKSQDGARCCWGCRP
RKRCKELWYNVRLKLWGIVESKYFNRGIMIAILINTISMGIEHHQQPEELTNVLEICNIV
FTSMFSLEMVLKITAFGSFNYLRNPYNVFDGIIVIISVCEIVGQSDGGLSVLRTFRLLRV
LKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLKTETGDTV
PDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMAATSPFAALYFVALMTFGNYVLFNLLV
AILVEGFQAEGDANRSYSEDDRSPSNFDESERHDSIKLSDPRICTLTPNGHVELGAVSIG
RGSYSSERRSFTLESRKSSVMSLGKSSLERRSLSLRHGRSTNYHNWGRPFPPQSGWNRRS
SSYSLGRRSYRFGGTPLVGGSLRLHSSRSPHSYNFVPEQESLLSHQPHSHHPLLSHHPPP
PPLLLSRHSSVRRDRRALSLELPELLRTGGQPQGPPAGHQDPGRRSGSGAGGSITGGSRD
GSGVGVDHRDCNGKAPGPHTLLMTDVFPQVNARKDRADLDEETDYSLCFRIQKMMEAYRP
DWCETREDWSVYLFSPQNKFRLLCQSIIAHKLFDYVVLVFIFLNCITVALERPRILQGSL
ERLLLTISNYVFTAIFVAEMTVKVVSMGLYLGETAYLRSSWNILDGFLVFVSLIDIVVSM
AGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLITSLKPIGNIVLICCAFFIIFG
ILGVQLFKGKFYYCVGLDVKNITNKSDCLAANYRWIHHKYNFDNLGQVQPAGGTAQKLPY
YSSYGPARLAIHKLCTSHYLDLVITFIICINVITMSLEHYSQPQSLETALKYCNYFFTST
FVIEASLKLVAFGFRRFFKDRWNQLDLAIVLLSVMGITLEEIEINASLPINPTIIRIMRV
LRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGELVCNAD
YPCEGMSRHATXXXXXXXXXXXXRALFQVSTGDNWNGIMKDTLREACSXCHAGLQFISPL
YFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEDAEMDAEIELELAQGGLCCMMGNIGA
IAGTTGGAAGGASVSGIMSSAIQAGTVGSPSGMVSAPLRDGGSGCAARDGHTHRQCQLYS
PAQESQWLDSVSLLIKDSLEGDMIDNLSGSVFHHYCSPPVCKDCKSHPQEIRLAEVEQAS
LMSEQLSDKSSSPALPDDLSLDEHSNYHLLVRDGQVDSSDSHSSQELPTQVGYSGLGPCS
SGSEEGIQELFQVGVHSQGNPPTRELQSLAQITDDDGESRSGAGAGASPLIHLPADFFHP
AAAAHPGSPGNAAGPGDAAASTLASPASWASLRSPGANSRPLGSQHPSRSDSSLADGSSE
GSLHSTPEEGLGFNVSQPRDTDLPVPLLCPLPSQPLNPQESVSGDQDKTLLKRRSTTVTL
KATRGHQRSQSSCGGGSTSPGYPRQDSMDPSDEDVGPQSGSDGCRQTWNSEHLSETLISL
SLTSLLTPGSLAQPLVKKCNSTGSLDQTNLSARSKDGRHVYSIDAHGFLSNPWTEGKDTG
AEEDSGTTGFGRGRRSSRPTDTTSRKNR
NT seq
6747 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtgaggaggaggagggccccggtgttgccgcatcaacaccgtcaggagcggcg
gccacttccagggtaacaagagtggcagccaggggcaacaacgatgacacggtcacttcc
tcctccccccgcagaccatccccgtaccgcctcccccgtcccacggagaaggaggaggaa
gaggaggagatagaggaagaagggattattcaggaagatcggattgaggaggaggaggaa
gaggaagtggattgtagtaggaataatcatgaagaggaggatgatgacgacgacgacgat
gaagaggccaacagtgacaccagcatgttagtggtgccctaccctgagctggtgccggtg
gtcttcttctgcctgaagcagaccacctgcccccgcagcctgtgcatccgtctggtctgc
agtccatggttcgagcgtgtcagtatgatggtgatcctgttgaactgtgtgaccctgggg
atgtaccagccctgcgagaacatcgactgctcctcggaacactgccaggtactgcaggcc
tttgacgcgttcatctacatcttcttcgctctggagatggttataaagatggtcgccctg
gggatcttcggccgtcgctgttaccttggggacacctggaaccgactggacttcttcatc
gtcatggcgggaatggttgaatattctctggacctacagaacgtcaacttcactgccatc
aggactgtgagagttcttcggcccctgaaagctattaaccgggtaccaagtatgcgtatc
ctggtcaacctgctcctggacaccctgccgatgctgggcaacgtcctcctcctctgcttc
ttcgtcttcttcatctttggcatcattggcgttcagctgtgggcggggctgctgaggaac
cgctgcttcctggaggagaactttactctcaccactggcatcagcctgcctcggccctac
tacatccccgacgaggacgacgagcggcccttcatctgctcgctgcccgtcgacaacggc
atcatgtcctgctccgacgtccccgctcgacgagaaggcgggaagacgtgctgcttggac
aaagacgacgccctgtaccgacagtcgctgggcctgagccccgagccgctggtcaacggc
agcgtcagcgtcgcagggctgtgcgtcaactggaatcggtactacaccaggtgtcacacc
gggcacaggaacccgcacaaaggagccatcaattttgacaacatcgcctacgcctggatt
gtcatcttccaggtgatcactctggagggctgggtggagatcatgtactacgtgatggac
gctcactccttctacaacttcatctacttcatcctgttgatcatcgtcgggtccttcttc
atgatcaatctgtgcctggtcgtcatcgccacccagttctcagaaaccaagcagagggag
catcagctgatgcaggagcagagagcgcgcttctcctcctcctccaccctggccagtgag
ccgggggactgttacgaagaactctttcagctggtctgccacctccttcgcaaggccagg
agacaaactgtcaacttttttaacacgctgcgtgggaaaccacgtggctttcgtggcgtc
ggaagaggcaggggacgaggcgagggacgagagaggaaggccaatggacgaggagggcgt
gagagaagggcggtgacgaggcacggccctccctgcccccaccacagtaaacccgaccac
tcggcgtctggtcaacccgcggccctcgctgcagccccaccctccgacggctgccctcga
tgtgccgcagccctggcgctcacggacggtgtcggccctgtacgcagcgcagccggtgga
gaaacggaggagggcggcgtggaggaagcagacagggagggcggacagtctggagctaac
gagaagagcggcggcgagaagagtcaggacggcgcacggtgctgttggggctgcagaccc
aggaaacgatgcaaggagctgtggtacaacgtgaggttgaagctgtggggcatcgtggag
agcaagtacttcaacagaggcatcatgatcgccatcctgatcaacaccatcagtatgggc
atcgaacaccaccagcagccagaggagctcacgaacgttctggagatctgcaacattgtc
ttcaccagcatgttctccctggagatggtcctcaaaatcacagcctttggctcattcaat
tacctccgaaacccctacaacgtcttcgacggaatcatcgtcatcatcagtgtgtgtgag
atcgtgggtcagtctgacggcggcctctcggtgttgaggaccttcaggctgctgagggtg
ctgaagctggtcagattcatgcctgctctgaggagacagctggtggtcctgatgaagacc
atggacaacgtcgccaccttctgcatgcttctcatgctgttcatcttcatcttcagtatt
cttggaatgcacatcttcggttgtaagttcagtttgaagacggagacgggtgacacagtt
cctgacaggaaaaactttgactccctcctctgggccattgtgaccgtatttcagattttg
acacaagaggactggaacgtggttctgtacaacggtatggcagcgacctcaccgttcgct
gccctgtacttcgtggctcttatgacgtttggaaactatgtcctctttaacctcctggtc
gccatcttggttgaaggctttcaggctgagggcgacgccaatcgctcttactcagaagac
gaccgctctccctctaattttgatgaaagtgagagacacgactccatcaaattgtcagat
ccgaggatctgcaccctaacacccaacggtcatgtggagctgggtgctgtttccattggc
cgaggatcttattcatccgagcgacgcagcttcaccttggagtccaggaagagcagcgtg
atgagtttggggaagagcagcctggagagacgctccctctctctgcgccatgggcgtagt
accaactaccacaactgggggcgcccttttcctccacagtcgggatggaaccgcaggtct
agctcctacagcctgggcaggaggagttacaggtttggaggaactcctctggtagggggc
agccttcgcctgcacagcagccgctcccctcactcgtacaactttgttccggagcaggag
tcccttctctcacaccaaccccactcccatcaccctttactgtctcatcacccccctccg
cccccgttgttgctctcaagacactcgagtgtgaggagagatcgacgggcgttgtccctg
gagctcccagaactgctgcggacgggcggacagcctcaaggcccacccgctggtcatcaa
gaccccgggagacgcagcgggtctggggcaggagggtccatcaccggtgggtccagagac
ggtagtggtgttggagtggaccaccgggactgtaacggcaaggcgccgggaccccacacc
cttctgatgactgacgtgttcccacaagtcaatgcacgcaaggacagagcagatctggac
gaagagaccgactacagcctgtgcttccgtatccagaagatgatggaggcttaccgccca
gactggtgcgaaaccagagaggattggtcagtttatctgttctctccacagaacaagttc
agactcctctgccagtccatcatcgcccataagctgtttgactacgtggtcctggttttc
atctttctcaactgcatcacagtggccctggagaggcccagaattttacagggaagcttg
gaacggctgcttctgaccatttccaactacgtcttcacggctatttttgtagctgagatg
acagtcaaggtggtgtccatgggtctgtacctgggggagacggcctacctgaggagcagc
tggaacattctagatggcttcctggtcttcgtctcgttaattgacatcgtggtgtccatg
gccgggggggcaaagatcctgggggtgctgcgcgttctcaggctgctcaggacactgcgc
cccctcagggtaatcagcagagctccggggctgaagctggtggttgagaccctcatcaca
tccctcaagcccatcggcaacattgttctgatctgctgtgctttcttcatcatctttggc
atcctcggtgttcagctcttcaaaggcaagttctactactgcgtgggtctggacgtgaag
aacatcaccaacaaatccgactgtctggccgccaactatcgatggattcaccacaagtac
aacttcgacaacctgggacaggtacagccagcagggggcaccgcccagaaactgccctac
tattcctcctacggccctgcacgcttggcgatccacaaactgtgcaccagccactatttg
gatctagtcatcaccttcatcatctgcatcaacgtcatcaccatgtccctggagcactac
agccagccacagtctctggagacggcgctgaaatactgcaactacttcttcacctccacc
tttgtgatcgaggcctctctcaaactggtggcttttgggttccggcgcttcttcaaagac
aggtggaaccagttggacctggctatcgtgctgctgtcagtgatgggcatcaccctggag
gagatcgagatcaacgcctcgctgcccatcaatcccaccatcatcaggattatgagggtg
ttaaggatagcacgagttttaaagttgctgaaaatggcaaccgggatgagagctttgctt
gacacagtggtccaagctctgcctcaggttggaaatctgggtcttctcttcatgttgctg
ttcttcatctacgctgctctgggagtggagctgtttggagagctggtgtgtaacgctgac
tatccctgcgaggggatgagccgccacgccacctnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnncgcgcgctcttccaggtttctacgggggacaactggaacggcatcatgaag
gacacactgagagaggcgtgttcgncctgccacgcagggcttcagttcatctccccgttg
tactttgtgtcttttgtgctgacggctcagttcgtcctgatcaacgtggtggtggccgtc
ctcatgaagcacctggacgattccaacaaggaggctcaggaggacgccgagatggatgct
gagatagagctggagctggctcagggaggcctctgctgcatgatgggaaacatcggggcc
atcgccggaaccaccgggggggcggcaggtggggcgagcgtgagcggaataatgtcaagt
gcgattcaagcgggaacggtgggaagcccaagtggaatggtgagcgcaccactacgagat
ggaggaagcggctgcgcggctcgtgacggacacacacaccgtcagtgtcagctttattct
ccggctcaggaaagccagtggctggacagtgtgtctctgctgattaaagactcgctggag
ggagacatgatcgacaacctctctggttcggttttccaccactactgttctccccctgtc
tgcaaagactgcaagagtcacccacaggagatccgattggctgaggtggagcaggcgtct
ctcatgtcggagcagctgtcggacaaatcctcgtctcctgctctgcctgatgacctcagc
ctggatgaacacagtaactaccacctgctggtcagagacggtcaggtggacagcagtgac
tcccacagttcacaggagttgcccactcaggtgggctacagtggacttggtccgtgcagc
tctgggagtgaggaggggatccaggagttgttccaggtgggcgtccattctcaggggaac
cctcccacacgtgagctgcaaagtttggcacaaatcacagatgatgatggagaaagtcga
agcggcgctggtgcaggagcttcgcctctcatccacctccccgctgacttcttccaccct
gctgcagcagctcacccaggcagtcctgggaacgctgccggtccaggagacgcagcggcg
tccacgttggcttctccagcctcttgggcctccctgcgctcaccaggtgccaacagcagg
cccttgggctctcagcatccatctcgcagtgactcctccctagcagatggcagttcagag
ggtagcctgcactccactcctgaggaaggtctgggctttaatgtctcccagccgcgggac
acagatctcccagtgcctctcctctgccctctccctagccaaccactaaatccccaggaa
tctgtatcaggggaccaggacaaaactttactaaagagacgaagcactacagttacccta
aaggccaccagggggcaccagaggagccagagcagctgcggtggtggcagcactagccct
ggctatcctcggcaagactccatggacccgtcggatgaagacgtgggtccacagtcgggg
tcggacggctgccgacagacctggaacagtgaacacttgtcagaaacactcattagcctc
tcgctgacctcactgctcacccctggctctctggcacaaccactggtcaagaaatgtaat
agcacaggttctttagaccaaaccaacttgtctgcgcggagtaaagatggccgccatgtg
tacagtatagatgcccatggtttcttgtctaacccttggacagaaggtaaagacacgggt
gcagaagaggacagtggaacgacaggcttcggcagggggcgccgcagcagccgaccaaca
gacacaacctcaagaaaaaatagatga
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