Cynoglossus semilaevis (tongue sole): 103383553
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Entry
103383553 CDS
T04866
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein-like isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103383553
03036 Chromosome and associated proteins [BR:
csem03036
]
103383553
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103383553
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Gene silencing
piRNA pathway
103383553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA
UBA_7
RRM_1
RRM_occluded
Mei5_like
THOC7
Motif
Other DBs
NCBI-GeneID:
103383553
NCBI-ProteinID:
XP_008314954
LinkDB
All DBs
Position
9:5599299..5639102
Genome browser
AA seq
1876 aa
AA seq
DB search
MEEKKKKKQEEKIKKDIAQKKAADLKPKVPEAAPSKPSPGSPHHLGPASTTLPLSSSSSF
SSSSSGNGKSASSCSQLQTQTPSQQQQCQLSSASARYPPREVPPRFRQQEHKQLLKRGQP
LPVGALSALTLSSPSSSSSSSFSSSSYYSYSTSTSSTSPSSATSTAAKLADKSPRNGSGA
QYETSLRGASLPVDSSFSANSWDKVIIDKSDNDTWPSISGNSDTSQSIPECPLGSASSNL
HTCAVTTTNSGTFMSMATGATGQQAHYPSLKSNNNMMTGPGSANTLVANRGWGSDSKQDA
INGRIGAPNNWGSPSFNLNLNPNANPSAWPVLGHEGNGIGPNGVSNSASLPPGINSNGNM
GNGTLGSSDNVGGGWGSMRSPNENEQHSSSKTSLSFNMECANLNSDGPNHAKQAPEPMSP
IHGLTGWGGQSPTESSQLNRETSSSLWGGSETKRIDSPKDSGWDSTSSGGLAAWGRQGSG
GGGSNGSGGWGDWGKPSAGGDGPKGWDSVDAGSSGSGQEQQLGSWGQQPGTAPASEGSGD
SSEGRSHHRDRSSSMDYTPVLPRQDLDPRVLSNTGWGQTPIRQHTVWEMEEASSDDAKSN
SNSSTDTMGGSSCNSVPPSTNGGTINPNNMSSQRPGSGGNNDNDKSSSSGWGAPPPKPIQ
TGSGWGDTQQSLSKASNGTTSGWGDPLPTSGHKGGNTSSWGSENKTTSWDDGMMKSQPRS
WGEGPQSSHGWRNSNENSGTGKWGEPEVKNTGSSSSMWESEEGNVGNGGWKESPRGGNTG
GSWGKPTGTNSSWGETSSANGPVQGSWGSSKPQESSSSSSGSGGGGSMGSWGGPASVKQN
PSGWGNGSKQDQSMEPTGWEEPSPPSVRRKMEIDDGTSTWGDPNAYNKTVNMWDRNNPTG
NGGPPHSKNGGMIMPNNNNNHSVIPTNNHHQSHHVHHHPHHGQTPTHLQHHGNNNNSSPN
NVASHPSVGPQGRTPIANPGWGELPNVQPKSEPAWGEPATPTSTVDNGTSAWGKPTGGVG
GWGDGNHESSGSYGRANGPPGSAPCKPGPKPMQDGWGNGGEEMGMSTSQWDTEEGDMWNS
PTSQESSSSCNSWGNGPKKVPSKVKMSNKPDEAWIMNRLIKQLTDMGFPRDPAEEALKSS
NMNLDQAMSALLEKKTDLDKRGMGMSDYCNGMNKPLMCRPSALSKDPSDRAAFLDKDVLS
DDAPPSPFLPSPSLKLPLANSSLSGQGLGQGNPGMTMQNLNNRQIPSGMFSSSGAAQTRA
MQQPPQPPVPPLSSSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLNPALLTSPINPQQMT
LLYQLQQLQMAYQRLQIQQQMMQAQRNVSGPIRQQEQQVARTITNMQQQIQQHQRQLYQA
LLMKQQQLPTHSSTTSSSSGLHPHGVPTGGPGSGKSTLDPFTGPPQAPGLVDTLHTKEPP
SSPNTYSTYPLSGLNPNMNVNCMEVGGLSLKEPPQPQSRLSQWTHSNSMDSGNPSNMENN
LNKHGAISAASTLGPPGKPPQLEDSYSPYNLISSSESPTSPLVPPDSWGQGKSPNEKISN
GTNINWPPEFCPGVPWKGLQNIDPENDPNMTPGSVPSGPTINTNIHDVNRYLLRDRNGGK
LSDMKSTWSPGPISQSQASLSHELWKVPQGPRSTTAPSRPPPGLTNTKHSSTWGGNSLGL
AQGWSSSYSSEGTTWSTDSSTRTSSWLVLRNLTPQIDGSTLRTLCMQHGPLITFHLNLTQ
GNAVVRYSSKDEAAKAQKSLHMCVLGNTTILAEFAGEEEVTRFFAQGQSLGANTTSWQAN
PGTNQNRMGGAAQSHSIGQWSSGGGGKASGGDLLWGGVPQYSSLWGPPSGDDARVIGSPT
PINTLLPGDLLSGESM
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaaacaagaagaaaagattaagaaggacattgctcagaaa
aaggctgctgatctgaaacccaaagtgccagaggctgctccctctaagcccagccccggc
tcaccccaccaccttggccctgccagcaccacgctgcccctctcctcctcttcttccttc
tcctcttcttcttctggcaatggcaagagcgcctcctcctgtagccagctccagactcag
actccctctcagcagcagcagtgccagttgtcttctgccagtgctcgctacccacccaga
gaggtgcctccgcgctttcgccagcaggagcacaagcagctactgaagagaggccagcca
cttcctgtaggagccctcagtgctctgactctctcctccccctcctcctcctcctcctcc
tccttttcctcctcatcttactattcttattctacaagtaccagcagcacttccccaagc
tctgccacatccactgcggccaaacttgcagacaaatccccacggaacggctctggtgcc
cagtatgaaacctctctcaggggagcttctttgcctgttgacagctccttcagtgccaac
agttgggacaaagtgattattgacaaaagtgacaacgacacttggccctcaatcagcggc
aatagtgacacaagccagtctataccagaatgccccttgggctcagctagctctaaccta
cacacttgtgctgtcactaccaccaatagtggtacattcatgagtatggctacaggtgct
acaggccagcaggcccactacccatctctcaagtctaacaataacatgatgacaggacct
ggttcagccaacacactagttgctaatagaggctggggctcagatagcaaacaagatgct
atcaatggtagaataggtgcaccgaataattggggctctcccagttttaacttgaacctg
aatcctaatgccaacccatctgcctggccagttctgggtcacgaaggtaatggcattggt
cccaatggagtgtctaactctgcctctctgccaccaggtattaacagcaatggaaacatg
ggtaatgggactctcggaagttcagataatgttgggggtggttggggtagtatgagaagt
cccaacgaaaatgaacaacactcatcgagcaagacaagtttgtcctttaatatggaatgt
gctaaccttaactcagatgggccaaaccatgctaaacaagctccagagccgatgagcccc
atccatgggttaactggctggggaggccaatcacccactgaatcatcccagctgaatagg
gaaacaagcagctcattatggggtggaagtgaaacaaagagaattgactctcccaaggat
tcgggctgggactcaacttcttctggtggccttgctgcctggggccgtcaaggaagtggt
ggtggtggtagtaatggaagtggtggatggggagattggggaaagccttctgctggtggg
gatggtcctaaaggctgggactcagtggatgctggcagttcaggttcaggccaagagcag
caacttggctcatggggtcagcagcctggaacagcccctgcaagtgaaggtagtggtgac
agcagtgaaggccggtctcatcacagagacaggtcatctagcatggattatacacctgtg
ctacctcggcaggacctggacccgagagtgctgagcaacactggttggggacaaacccct
attcgtcagcacactgtgtgggaaatggaagaagccagttctgacgatgcgaaaagcaac
agcaacagcagcacagacaccatgggaggctccagctgtaatagtgtacctccatcaaca
aacggaggtactattaatcctaacaatatgtccagccagagacctgggtctgggggaaat
aacgacaatgacaaatcatcatcctctggttggggcgcccctccacctaagccaattcag
actgggtcagggtggggggacactcaacagtcactaagtaaagcctcaaatggcacgaca
agtggctggggagacccgttgcctacaagtggtcataaaggtgggaacacatcatcctgg
ggttctgagaacaagacaactagctgggacgatggcatgatgaaaagccagcccaggagc
tggggagaaggcccacaaagttcacatggttggcgcaacagtaatgaaaactctggcaca
ggaaagtggggagaaccagaggtcaagaacactgggtcttctagcagcatgtgggagagt
gaagaaggaaatgtcggaaatggtggatggaaagaaagccctagaggaggaaatacagga
ggaagctggggaaaacctactggtactaatagtagctggggtgaaacctcatccgccaat
ggcccagtgcaaggaagctgggggtcttctaagccccaggaaagcagcagcagtagttct
ggcagtggaggaggtggcagtatgggttcttgggggggtcctgcttctgttaaacaaaac
ccctctggctggggcaatgggagcaaacaggaccaaagcatggaacccactggatgggaa
gagccctcacctccctctgtccgaaggaagatggagattgatgatgggacatccacttgg
ggtgatccaaatgcctacaacaagactgtcaatatgtgggatcgtaacaatcccactggc
aatggtggcccacctcatagtaagaatggcgggatgatcatgcccaacaataacaacaat
cactctgtaattcctacaaacaatcaccaccagagtcaccacgtgcatcatcacccccat
catggccaaaccccaactcacctgcagcatcatgggaacaacaacaacagttcgcccaac
aatgtggcctcacatcccagtgttggaccccagggaagaacacccattgctaacccagga
tggggagaacttcccaatgttcagcccaagtccgaacctgcttggggagagccagcaact
ccaacatcaacagtggacaatggtacttctgcctggggcaagcctaccggaggagtagga
ggttggggagatggcaaccacgagtcctctggatcctatggtagagccaacggaccccca
ggttctgcaccctgcaagccaggccccaaacctatgcaagatggctgggggaatggcgga
gaggagatgggaatgtctaccagccaatgggacacagaagaaggggacatgtggaacagc
cccacctcccaggagagcagctcctcatgtaattcttggggaaatggacccaagaaggtc
ccaagcaaggtgaagatgagcaacaagcctgacgaggcctggatcatgaatcgtctcatc
aaacagctcacagacatgggctttccgagagaccctgctgaggaggcgttgaaaagcagc
aacatgaacctcgaccaggccatgagtgccctgctagagaagaaaactgacctggacaag
cgaggtatgggcatgtctgattactgcaatggcatgaacaagcccttgatgtgtcgaccc
tcagcactctccaaagacccctctgaccgagccgcctttcttgacaaggatgtgctgtcc
gatgatgcccccccatcaccatttctgccttcccctagcctgaagctccccttggccaac
agtagcctatctgggcaaggcctgggacagggcaacccggggatgaccatgcaaaacttg
aacaacagacagatacccagtggaatgtttagcagcagtggagcagcacaaacccgggcc
atgcagcagcctcctcagccacctgtgccacctctcagctcctcccagcctagtctacgt
gctcaagtgcctcagtttctctcccctcaggtccaagcacagctcttgcagtttgcagca
aaaaacataggtctgaatcctgcacttttaacctcaccaataaaccctcaacaaatgacc
ctgttgtaccaacttcagcaactgcaaatggcgtaccagcgtttacaaatccagcagcag
atgatgcaggcgcagcgcaatgtttccgggcccattagacaacaagagcagcaagttgca
cgtacaatcaccaacatgcagcagcagatccagcagcaccagcgtcaactctaccaggcg
ctgctgatgaagcagcagcaacttcccactcattcctcaaccacttcctcctcctctggt
ctgcaccctcatggtgttcctactgggggacctggctccggcaaatcaactctggaccct
ttcactggaccaccacaggctccgggcctcgttgacacactgcacaccaaagagccgcca
tcttcaccgaatacctacagcacctatcctctctctggactgaatccaaacatgaatgta
aactgcatggaagttgggggtttgtccttaaaggagcccccacagccgcaatcccggctg
tcccagtggacacactccaactccatggactctggcaacccttccaacatggagaataac
ctcaacaagcacggtgccatttctgctgcctccacgctgggccctccagggaagccccct
cagctcgaggattcgtacagcccttacaatcttatatccagctctgagtcccccaccagc
ccactggtacctcctgacagttggggtcagggcaagagcccaaacgaaaagatctccaat
gggaccaacatcaactggcctccagaattctgcccaggtgtgccatggaagggccttcag
aatatcgaccctgaaaatgaccctaacatgaccccgggcagtgtccccagtggtcccacc
atcaacacaaacattcacgatgtcaatcgatatctgctgagagacagaaatgggggaaaa
ctttctgatatgaagtccacctggtccccagggcccatctctcagagccaagcctctctg
tcgcatgagctgtggaaggtcccccaagggccccgcagtaccacagctccttctcgacct
ccaccaggcctcacaaacaccaagcactcctccacttggggtggcaactctttgggtctg
gcccaaggctggagcagctcttactcttcagagggaacgacctggagtactgatagctcc
accagaaccagcagctggctggtgctgaggaatctgacaccacaaattgatggctcaact
ctgcggaccctgtgcatgcagcatggccccctcatcacattccacctcaacctgacacag
gggaacgccgtggtacgctacagctctaaggacgaagcagccaaagcccagaagtctctg
cacatgtgtgtgcttggaaacaccactattctggcagagtttgccggagaggaagaggtg
acccgcttctttgcacaaggtcagtcactaggggcaaacaccactagctggcaggccaac
ccaggaaccaatcagaatcgaatgggaggggctgcgcagtcccactccattggccaatgg
agcagcggcggcggaggaaaggccagcggcggcgacctgctatggggtggggtgccgcaa
tactccagcctgtggggtccgcccagtggagatgacgcccgtgtaatcgggagcccaacc
cccatcaacaccctgctgcctggagatctactgagtggggagtccatgtag
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