Cynoglossus semilaevis (tongue sole): 103383573
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Entry
103383573 CDS
T04866
Symbol
ddx39a
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csem03041
]
103383573 (ddx39a)
Enzymes [BR:
csem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103383573 (ddx39a)
Spliceosome [BR:
csem03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103383573 (ddx39a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Utp25_C
Motif
Other DBs
NCBI-GeneID:
103383573
NCBI-ProteinID:
XP_008314982
UniProt:
A0A3P8USI5
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Position
9:5979554..5984111
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AA seq
424 aa
AA seq
DB search
MADNDELLDYEEDDEPQGVTDSGTSANKKEVKGSYVSIHSSGFRDFLLKPELLRAIVDCG
FEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRE
LAFQISKEYERFSKYMPSVKVSVFFGGMAIKNDEDVLKNNCPHIVVGTPGRTLALIRNKN
LSVKNIKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQVMMFSATLSKEIRPVCRKFMQ
DPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVHRCVALS
QLLVEQNFPAISIHRGMSQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDM
PEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKTLNEVQDRFEVNVAELPEEIDISSYI
EQSR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaatgatgagcttctggactatgaggaggatgacgagcctcagggagttact
gatagtggtacctctgcaaacaagaaagaggtaaagggttcctatgtatccatccacagt
tcaggcttcagagattttcttctcaaaccagagctgcttcgtgccattgttgactgcggt
tttgagcatccctccgaagtccagcatgagtgtattcctcaggctatcctgggcatggat
atcctgtgtcaggccaagtctggtatgggaaagacagcagtgtttgtactggcaactctg
cagcagatagaacctgttgatggtcaggtgtctgtccttgtgatgtgccacacacgagag
ttggccttccagatcagcaaggagtatgaacgattctcaaagtacatgcccagtgtcaag
gtgtcagtgttctttggtggcatggcgatcaagaacgatgaggacgtcctgaagaacaac
tgtccacacatcgtcgtgggaacaccaggacgtactctagccctcatccgcaacaagaat
ctcagtgtgaagaacattaaacactttgtgctggacgagtgtgataagatgttagaacag
ctggatatgaggcgtgatgtccaggagatcttcagactgacaccccacgagaagcaggtc
atgatgttcagtgcaacactcagcaaggagattcgacccgtctgccgcaagtttatgcag
gacccaatggaggtttttgtggacgatgagaccaagctgacacttcacggcctgcagcag
tattactgcaagttaaaggacagcgagaagaaccgaaagttgtttgacttgctggatgtt
cttgaatttaaccaggttgtaatctttgtgaagtcggtgcatcgctgtgtggccttgtca
cagctgctggtggagcagaacttccctgctatttccattcaccgggggatgtcacaggaa
gagagattatcccgatatcagcagttcaaagacttccagagacggatcttggttgcaaca
aacctctttgggcgaggcatggacatcgagcgggttaacatcgtcttcaactatgacatg
ccggaggattctgacacataccttcacagggtggcccgtgctggcaggtttgggaccaag
ggtctggccatcacttttgtgtcagatgaaacggatgccaagaccctgaacgaggtccaa
gaccgctttgaggttaatgtagctgagctaccagaggagatcgacatttcctcctacatt
gaacagtccagatga
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