Cynoglossus semilaevis (tongue sole): 103383591
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Entry
103383591 CDS
T04866
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03013
Nucleocytoplasmic transport
csem03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103383591 (pnn)
03015 mRNA surveillance pathway
103383591 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103383591 (pnn)
03041 Spliceosome [BR:
csem03041
]
103383591 (pnn)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103383591 (pnn)
Spliceosome [BR:
csem03041
]
Complex C
Other components
EJC/TREX
103383591 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
103383591
NCBI-ProteinID:
XP_008315011
UniProt:
A0A3P8WCF5
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Position
1:complement(19032507..19038651)
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AA seq
684 aa
AA seq
DB search
MAVVVRSLQDQLEKAKESLKNVDDNIRKLTGRDPNESRPGQIRRLGGPLAGVGGGRGRGL
NLLRRSLSDIGSGGPPAKQRDIDGALLRLAGDQRARRDVRHDSDAEDDDDVKKPALQSSV
VATSKERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESNVSTEKQKRRSEIEQK
LEVQAEAERKKVENEKRELFEERRAKQTELRLLEQKVELAQLQEEWTSHNNQLVKYIRTK
TQPHLFYLPGKMCSASQKLHDESTKKLNAIFEERREAFAEHLSKMESRPRRPPNRDQDSN
TGVDRPVEGKPVGQLVKVTGNRADVEMEEEEDEEEEEREKEESGKVAKDDGGEREEEEIE
VQKRADDERERMELSEEGSGDKKEVEERVEDNGEQKDKREEEPSPGSEEMEVEGEQGNNG
KEDEGGKKVKQEPTALYIENTQDAQSSEPTIPSQDAAETNEQPQSSPPLGETAVKAVQSP
ELQRASPNPEPQTVAAESGQNVSTSGQEGHDTTNEFKVKKERSEDESEAPVKLPDSQETL
STTPALSIKEDEGLRGRKKVRESRKSSSRSNSSSGSSSGSSSSGSSSSSSGSSHSSSSSS
SSSSSSSKSSSRSRSHDTDKRKRRPSDRDRKKDDRSHQKRGGSGGGGRDSKGVKERRKRS
EEGRGRSSRSDREQKDKDRKDKRR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtggtgcggagcttgcaggaccagctcgaaaaagcgaaagaaagcttaaaa
aatgtggacgataatattcgcaaactaaccggacgtgatccaaatgagtccagaccgggt
caaattcgccggctcggcggccccttggccggcgtgggaggaggtagaggcagagggctt
aacttgctgaggcgcagtctctctgacattggaagcggtggcccccctgccaagcaaaga
gacattgatggagctttgctgagactggcaggagaccagagggccaggagagatgtgcga
cacgacagcgatgccgaggatgatgacgatgtcaaaaagccggcattgcagtcgtctgta
gtagctacctccaaggagcgaacacgccgagacctcatccaagatcagaccatggatgaa
aaagggaaacagaggaatcggcgtatgtttggcctgctaatggggaccttgcaaaaattc
aagcaggagtcgaacgtctccactgagaagcaaaaacgacggtcggagattgagcagaag
ctggaggttcaggcagaagcggagcgaaagaaagtggagaatgaaaagagagagctgttt
gaagagaggagagcgaaacagactgagctgagactcctggaacagaaagtcgaactggct
cagctgcaagaagagtggacaagccacaataatcagctggtgaaatacattcgcaccaag
acacagccccacctcttctatctgcctggaaaaatgtgctctgcctcacagaaactccac
gatgaatccaccaagaaactgaatgctatttttgaagagaggcgtgaggcttttgctgaa
cacctcagtaaaatggagtctcgcccccgaagaccaccaaaccgcgaccaggacagcaac
acaggagtggaccgtccggtggagggtaagccagtaggtcagctagtgaaggtgacaggt
aacagggcagatgtagagatggaggaagaggaggatgaagaggaggaggaaagggaaaag
gaggaaagtggaaaggtagcaaaggatgatgggggtgagagggaggaagaagaaatagaa
gtacagaaaagggcagatgatgaacgggaaagaatggagcttagtgaggaaggcagcgga
gataagaaggaggtagaggagagggtggaagacaatggtgagcagaaggataagagggag
gaagagccaagtccagggtcagaggagatggaggtagagggggagcaggggaataatgga
aaggaagacgaagggggaaaaaaagtaaaacaagagccaactgctctttacattgagaat
acccaagatgcccagtcctccgaaccaaccatacccagccaggatgcagcagagaccaat
gagcagccccagtctagtccccctctgggggagacagcggtgaaggctgtacagtcacct
gagcttcaacgggcttcaccaaacccagaaccccagactgtcgctgcagagtcaggacag
aatgtcagcacatctggccaggagggtcatgacacaacaaacgagttcaaggtgaaaaaa
gagcgatcagaggacgaatcagaggccccagtgaagctgcctgattcccaggaaaccctg
agcaccacacctgctctgtccataaaggaagacgaaggcctgagggggaggaagaaggta
agagagtcgaggaagagcagcagccgtagtaacagctcctctggctcatcctccggctcg
tcctccagcggtagctcctcttcatcctccggatcaagccactcttcttcttcctcttca
tcctcttcgtcatcatcatccaaaagcagcagccgaagtcgcagtcacgacaccgataag
cgcaagagaaggccatcggatagggacagaaagaaggatgaccggagtcaccaaaagaga
ggaggaagtggtggcggaggaagggactcgaagggagtgaaggaaagaaggaagagaagt
gaggaaggaaggggaaggtcctctcgcagtgacagggagcaaaaagataaagacaggaag
gacaagaggcgctaa
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