Cynoglossus semilaevis (tongue sole): 103383758
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Entry
103383758 CDS
T04866
Symbol
fip1l1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103383758 (fip1l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103383758 (fip1l1)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103383758 (fip1l1)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
103383758
NCBI-ProteinID:
XP_008315262
UniProt:
A0A3P8V805
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Position
9:8948050..8954810
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AA seq
551 aa
AA seq
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MSAEEADKTTTTDASAGDEEEEWLYGDESESKEEEEEAKLNAAVGASADASTEDAVAHAT
GNGVASETTGEAAGDDVESESDSDDDDDDVRVTIGDIKTGAPQYTTYGATPVNLNIKTLG
SRPYGQVAAKLKGVDLDAPGNINGAPVLEVDMESFEEKPWRKPGADLSDYFNYGFNEDTW
KAYCEKQKRLRMGLEVSTIGSVTSKITVQQGRTGNDKDLISTLPVHTSKPDFSSPVNLYK
SAVSQVPSSRICLNQWTGPTVNIIKSGTIDVIGGQTATISRVEGRRRPNLEGNNIQVISE
HSTSEAEQTPAKMPTFFPPGPLPPNIPPPPFLPPPPNVSTAPPLIPPPRLPITVPPPGFP
PPTSGPPPAIIPKMDSGHPGGYDGRSVPPYPFPQGAYPPPMSGGVPPPWPPIIDNSKPWD
YYSRRDEKRDKERERPRERTHERDREREHSPSGMSYTSDEERYRYREYQERERHRERLSR
EKEERHRERRHREKEEGRHKSSRSSSSRRRHDSEEGDSHRRHKHKKSKRSKEGKEASEEM
GADQENQEAME
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggaggaagcggacaaaacaaccaccactgatgcgagcgcaggggatgaagag
gaggaatggctgtatggagatgagtctgagagtaaagaagaggaggaagaagctaaactg
aatgctgcagtcggtgcatctgccgatgcttccacagaggatgctgttgcacatgctact
ggaaatggagtggcatctgaaaccaccggtgaagctgcaggggatgacgtggagagcgaa
agtgacagtgatgacgacgacgatgacgtccgagtcactattggagacattaaaacagga
gcgccacaatacacaacttatggagctactcccgtcaacctgaacataaagacattaggc
tccagaccttatggacaagtggcagcaaagctgaagggcgtggatcttgatgctcctgga
aacattaatggagctccagtgctggaggtggacatggagtcctttgaagagaaaccctgg
aggaagccaggcgcggatctgtcggactatttcaactacggcttcaatgaagacacgtgg
aaggcttactgtgaaaaacagaagaggctgcgtatgggtctggaggtttctacgatagga
tcagtgaccagcaagatcacagttcagcaaggtcgtacaggcaacgacaaagatctcatc
tccacactgcccgttcatacctccaaaccagacttttcatctcccgtcaacctttacaag
tctgccgtcagtcaagtccccagcagtaggatctgtctcaatcagtggactggccccaca
gtaaatataataaaaagtgggaccattgatgtgatcggtggacaaacagccactatcagc
agggtggaaggccgtcgcagacccaacctagagggcaacaatatccaggtgatttctgaa
cactctacatcagaggctgaacaaacgccagctaagatgcccaccttcttcccacctggg
ccgctgcctccaaacattccccctcctccatttctccctcctccaccaaacgtcagcact
gctcctccactcatccctccacccagactgcccattactgtacctcctcctggttttcct
cctccaacaagtgggcctccacctgccattatccccaagatggacagtggtcaccctgga
ggttatgatggaaggtcagtccctccatacccattccctcaaggagcttatcctccaccc
atgtctggaggtgtgcctccgccctggcccccaataatagacaactctaaaccctgggat
tattattcccgtcgggacgagaaaagagacaaggaaagagagaggccaagagagaggact
catgagcgggacagagagagggagcacagtccctcaggcatgagctacaccagcgatgaa
gaacgctatcgttaccgtgagtaccaggagcgggaacgccatcgtgagcggttgagtcga
gaaaaagaagaaagacacagagagaggcggcaccgagagaaggaggagggacgccacaag
tcttcccgcagcagcagcagtcgacggaggcacgacagcgaggagggtgacagccatcga
aggcacaaacacaagaagagtaagaggagcaaggagggcaaggaggccagcgaggagatg
ggtgcagatcaggagaaccaggaggccatggagtag
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