Cynoglossus semilaevis (tongue sole): 103383782
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Entry
103383782 CDS
T04866
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103383782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csem03041
]
103383782
03009 Ribosome biogenesis [BR:
csem03009
]
103383782
Enzymes [BR:
csem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103383782
Spliceosome [BR:
csem03041
]
Complex A
U1 snRNP components
U1 related factors
103383782
Complex B
103383782
Ribosome biogenesis [BR:
csem03009
]
Eukaryotic type
Pre-60S particles
Helicases
103383782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
103383782
NCBI-ProteinID:
XP_008315294
UniProt:
A0A3P8VGZ5
LinkDB
All DBs
Position
9:9267283..9273704
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AA seq
633 aa
AA seq
DB search
MPGFSDRDRGRDRGYGGGPPRFSGGGGNRGGPPPGKFGNPGERLRKKHWNLDELPKFQKN
FYQEHPDVTHRTIQEVEQYRRTKEVTVKGRDCPTPMVKFHEASFPSYVMDVILKQNWTEP
TPIQSQGWPVALSGKDMVGIAQTGSGKTLAYLLPAIVHIQHQPFLEHGDGPICLVLAPTR
ELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDYLECGKT
NLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLKDY
VQINIGALQLSANHNILQIVDVCNDMEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDEL
TRRMRRDGWPAMGIHGDKSQQERDWVLNEFRYGKAPILIATDVASRGLDVEDVKFVINYD
YPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQASDLISVLREANQAINPKLIQMAED
RGGRGRGGRGGYKDDRRDRYSGSGRSNFGGNNYRDRDGDRGFGSGPKAAFGANKAQNGGS
YRGDTGNSSGNYGNNYGNSNGQGNFGAPVNQVGPFGNQNFQGPPQFGMQRSSQNGMNHPP
FPFNSQPPPPPQAQQPPPPPPMVPYPMPPPFPQ
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggttctccgacagagatcgtggcagagatagagggtacggtggtggacccccc
cgattcagtggtggtggaggcaacagaggtggacctcctccaggaaagtttggcaaccct
ggtgaaaggctgcggaagaagcactggaaccttgatgaactgcctaaattccagaagaac
ttctaccaggagcacccagatgtcacacacagaacaattcaagaggttgagcagtaccgc
cgaaccaaagaagtaaccgtcaaaggcagagattgtcccacaccaatggttaaattccat
gaagcttcctttccgagttatgtcatggatgttatcctaaaacagaactggactgaaccg
acccctattcagtcccagggttggccagttgccctcagtggcaaagacatggtgggcatt
gctcaaactgggtctggaaaaacacttgcatatcttctgcctgctattgtgcacatccag
catcagccattcttggagcatggcgatggaccaatttgcttagtactcgcacctacccgt
gaactggcccagcaggtgcagcaagtagcagcagagtacggaagagcctctcgtcttaaa
agcacctgcatctatggtggtgcacccaaaggaccccagatcagggacctggagagaggt
gtagagatatgtattgctacccctggtcgtctcattgactacctggagtgtggtaagact
aatctacgtcgttgcacttatctggttctggatgaagccgaccgcatgctggatatggga
tttgagccacaaattcgcaaaatagttgaacagatcaggcccgaccggcagactctgatg
tggagtgcaacctggcctaaggaggttcgccaactggctgaggacttccttaaggactat
gtccagattaacattggagcgctgcaactcagtgctaatcataacatcttacagattgtt
gatgtttgtaatgacatggaaaaggaggacaaactcatccgcttgctggaggagataatg
agtgaaaaggaaaataagaccatcattttcgtggagaccaaaagacgttgtgatgaactc
accaggaggatgaggcgagatgggtggccagcaatgggaattcatggagacaagagccaa
caggagagggactgggttctgaatgagttcaggtatggcaaagctccaatcctgattgct
acagatgtggcctcccgtggattagatgtggaggatgtgaaatttgtcatcaattatgac
taccctaactcctccgaggattatatccaccgcattggacgcacagcccgaagccaaaaa
acaggcacagcctacactttcttcacccccaacaacatgaaacaagccagcgacctgatc
tctgtgctccgtgaggccaaccaggccataaaccctaaactgattcagatggcagaggac
agaggaggtcgtggaagggggggaagaggtggctacaaggacgaccgacgtgataggtat
tctgggagtgggaggagcaactttggtggtaataattacagggacagggatggtgataga
ggttttgggagtgggccaaaggctgcctttggtgccaacaaggctcaaaatggtggcagc
tatagaggcgacactggtaactctagtggcaactatggcaacaattacggcaacagcaat
ggacagggtaattttggtgctccagtaaaccaggtgggtccttttggtaatcaaaatttt
cagggcccccctcagtttggcatgcagcgatccagtcagaacgggatgaaccatccacca
ttcccattcaactctcagccaccccctccaccacaggcccaacagcctccacccccacca
ccaatggtgccctaccccatgccaccacccttcccacagtag
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