KEGG   Cynoglossus semilaevis (tongue sole): 103383832
Entry
103383832         CDS       T04866                                 
Symbol
smu1
Name
(RefSeq) WD40 repeat-containing protein SMU1 isoform X1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
csem  Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:csem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csem03041]
    103383832 (smu1)
Spliceosome [BR:csem03041]
 Complex B
  Other components
   Complex B specific factors
    103383832 (smu1)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th LisH_TPL NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_Vps41 Ge1_WD40 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_SCAP Mala_s_1-like Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N Beta-prop_VPS8 WD40_RFWD3 TFIIIC_delta Beta-prop_WDR75_2nd Beta-prop_IP5PC_F WD_LRWD1 WD40_like LisH LisH_PAC1
Other DBs
NCBI-GeneID: 103383832
NCBI-ProteinID: XP_008315366
UniProt: A0A3P8VKL7
LinkDB
Position
9:complement(10373720..10380550)
AA seq 509 aa
MAVEMEPADVIRLIMQYLKENNLYRTLNTLQEETTVSLNTVESIDSFIADINSGHWDCVL
LAIESLKLPDNILIDLYEQVVMELIEMREVGAARSLLRRTDPMIMLKQTQPERYMHLENL
LICSYFDPREAYPNGSSKEKRRMAIAQALVREVSVVPPSRLIGLLEQVSSMKLHSPGHLS
PDTNMDTAGHKESHPEKERYPTQLYRHIKFGRRSHVECARFSPDGRYLITGSVDGFIEIW
NISSGKLSKDLKYQAEESFMMMDDAVLCMCFSQDVDLLATGAQNGKIKVWKIQSGLCLRR
FEHAHSKGVTCLSFSKDNNHILSASFDHTIRIHELRSGKTIKELNGHSSFVNDASFTQDG
FHIISASSDGTIKIWNTKTCESIHTFQSLSGTLVVPVYSVIPLPQNPEQLVICNHSSHVV
IMSMDGQTVKTFSADESATDFVCCTLSPHGEWIYCVGEDYVLYCFNYESGKLEKKLIVHE
KDVIGITHHPHDNLIATYSEDGLLRLWKP
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggctgtggagatggagcctgcagatgtgatccgcttgataatgcagtatctaaaggag
aacaacctctacagaacactcaacactttacaggaggaaaccactgtctctctcaacaca
gtggagagcatcgacagttttattgcagatataaacagtggccactgggactgcgtcctg
ttggccatcgagtccctcaagcttcccgacaacatactaattgacctttatgagcaggtt
gttatggaactaatcgagatgagagaggtgggtgcagctcgctcgctcctcagacgaact
gatccgatgatcatgttaaagcagacgcagccagagaggtacatgcacttggagaaccta
ctaatttgctcctactttgaccctcgtgaggcatatccgaatggcagtagcaaggagaag
cggcgtatggcgatagcgcaggccttggtgagggaggtcagtgtggtccctccttctcgc
ctcattggacttctggaacaagtcagttctatgaagctgcatagtccaggtcacctgtct
cctgacacaaacatggacacagcaggccacaaggagagccatccggagaaggagagatat
ccaacacagctttaccgccacatcaagtttggacggcgatcacatgtagaatgcgctcgc
ttctcccctgatggtcggtacttaatcactggatcagtggacggcttcattgagatctgg
aacatcagttctggaaaacttagtaaggatttaaagtaccaggcagaggagagcttcatg
atgatggatgatgctgttctctgtatgtgcttcagtcaggatgttgatctactggcaaca
ggagctcaaaacgggaaaataaaggtctggaagatccagagtggcttgtgtctgcgcagg
tttgagcacgctcacagcaaaggtgtgacctgtctgagcttctccaaagacaacaaccac
attctcagtgcttcttttgaccacaccatcagaatccacgaactgaggtctggaaagaca
ataaaggagttaaacggccattcgtcgtttgtaaatgacgcttcttttactcaagacgga
tttcacatcatcagtgcctcgtctgatggcactattaagatctggaacacaaagacttgt
gagtccatccacactttccagtcactgtcagggacattggtggtcccagtctacagtgta
attcctctcccacagaacccagaacagcttgtgatttgtaaccactccagccatgtggtt
atcatgagcatggacggtcagactgtaaaaacattcagtgcagatgaatcagccacagac
tttgtgtgctgcaccctgtcacctcatggggagtggatttactgtgtgggagaagactat
gtcctgtactgctttaactacgaatcagggaagctggagaaaaagctgatcgttcatgag
aaagatgtcattggcatcactcaccatccgcatgacaacctgatcgccacctacagcgag
gacggcctgctgaggctatggaaaccttag

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