KEGG   Cynoglossus semilaevis (tongue sole): 103383883
Entry
103383883         CDS       T04866                                 
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:csem00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103383883 (taf5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csem03021]
    103383883 (taf5l)
   03036 Chromosome and associated proteins [BR:csem03036]
    103383883 (taf5l)
Transcription machinery [BR:csem03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     103383883 (taf5l)
   Coactivators
    SAGA/TFTC/STAGA complex
     103383883 (taf5l)
Chromosome and associated proteins [BR:csem03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     103383883 (taf5l)
    STAGA complex
     103383883 (taf5l)
    TFTC complex
     103383883 (taf5l)
    SAGA complex
     103383883 (taf5l)
    SLIK complex
     103383883 (taf5l)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 TFIID_NTD2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_SCAP WDR90_beta-prop_4th NBCH_WD40 Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR41 RMC1_N Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_WDR19_1st Tricorn_2nd Beta-prop_VPS8 PEP5_VPS11_N PROPPIN WD40_like WD_LRWD1 Nbas_N Beta-prop_IP5PC_F Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 103383883
NCBI-ProteinID: XP_016890670
LinkDB
Position
9:complement(11082996..11086617)
AA seq 604 aa
MDMKRVRTEQIQYTVAQYLKRRQYVDTDSSLKGSKLYQSAEEMAASLTVQTESGCTNIVS
AAPCQADPLQYETQFSRLRSFLSETDIPWAKEVSSILYPLFVYLHLDMVRCGLKGAVDGF
YSRFHSSFLQDTEQRATVEQLRHVLTTQDVAANPRLSAFLEHKYVVHLSEAAYSYLLRYL
QSEDNSALCRALSTHLHLEVTTTRRTDYQLYGGAGGLAAVPSSTSSTWAGVDGVEAAVEG
VEVPAGIPQSKAALEALQDSIKRVREGPPSLTTVCFYAFHHTEQMLNTAEVSANSRLLAA
GFDSSTVKLWSLLARKLKSRPHRADVSRIHLACDVLEEEVDDEDVCGSEIKTLRGHSGPV
YRTCFLTDSSGLLSCSEDTTIRYWDLGSFTNTVLYRGHGYPVWDVDVSPCSLYFVSGSHD
RTARLWNFSRTYSLRLYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGASVRLFT
GHRGPVLSLAFSPNGKYLASAGEDQRVKLWDLASGTLFKDLRGHTDSVTSLSFSPDSSLV
ASSSMDNSVRVWDIRNSHSGTPADGSSNELVGMYTGNVSTVLKVQFMACNLLLVTGTAQE
KTEP
NT seq 1815 nt   +upstreamnt  +downstreamnt
atggacatgaagcgagtacgcacagagcagatccaatacactgtggctcagtacctgaag
aggcggcagtatgtggacacagacagctccctgaagggatccaaactctaccagtcggct
gaagagatggcagccagcctaacagtccagacagagtctggctgtaccaacattgtctct
gctgccccttgtcaggctgacccactgcagtatgagacacagttctccagactgcgctcc
ttcctctcagaaacagatattccctgggctaaggaggtgagcagcattctgtacccgctt
tttgtctacctccacctggacatggtacgttgtggcctcaagggggcagtagatggattc
tacagtcgtttccactcctccttccttcaggacactgagcagcgtgccactgtggagcag
ctgcgccacgtcctcaccactcaggatgttgcagccaatcccaggctgagtgcttttctg
gagcacaaatacgtggtacatctgtctgaggcggcctacagctatctgctgcgctacctg
caaagcgaagataacagcgccctctgcagggctcttagcactcacttgcatttggaggta
accactaccaggcgcactgactatcagctgtatggaggtgctggtggattggctgctgtc
ccaagctccacctcctccacttgggcgggagtggatggtgtggaggctgctgtggagggc
gtagaggttccagctgggatcccgcagagtaaagcggcactggaggccctgcaggactct
atcaagagggtcagagagggtccaccttcactcaccaccgtgtgtttctatgccttccat
cacacagagcagatgctaaacacggctgaagtgtcagccaacagtcgcctgctagccgct
ggcttcgacagctccactgtaaaactgtggagcctcctcgcccgaaagctgaagtcgagg
ccacaccgggctgacgtgtcgcggatccacctggcctgtgatgtgctggaagaggaggtg
gatgatgaggatgtctgtggcagtgagatcaaaactctgcgaggtcacagtggccccgtc
tatcgtacctgcttcctgacggacagctctggcctcctgtcctgctctgaggacaccacc
atccgctactgggacctgggcagcttcacgaatacagtgctgtaccgaggccacggctac
ccggtgtgggacgtggacgtcagcccctgcagcctctactttgttagcgggtcccacgac
cggaccgcccgcctctggaatttctctcgcacttattcactgcgactgtacgccgggcac
cttgcagatgttgactgtgtcaagttccacccaaactccaactacttggccacaggctct
acagacaagacagtgcgtctttggagcacccagcagggggcgtctgttcgccttttcacc
ggccaccgcggcccggtgctttcactggccttctcccctaatgggaagtacttagcttct
gccggcgaggaccaacgagtgaagctgtgggacttagcttcagggacgttgttcaaagac
ctgcggggtcacacagacagtgtcaccagcctgtcgttcagccccgacagcagcttggtg
gcgtcctcatccatggacaactctgtacgggtctgggacattcgaaattctcactcggga
acgccagctgatggctcgtccaacgaactggtgggaatgtacacgggaaatgtcagcacg
gtgctaaaggtccagttcatggcctgtaacctgctgctggtaacaggaactgctcaggaa
aaaacagagccttag

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