Cynoglossus semilaevis (tongue sole): 103383928
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Entry
103383928 CDS
T04866
Symbol
tsc2
Name
(RefSeq) tuberin isoform X1
KO
K07207
tuberous sclerosis 2
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04115
p53 signaling pathway
csem04140
Autophagy - animal
csem04150
mTOR signaling pathway
csem04218
Cellular senescence
csem04910
Insulin signaling pathway
csem05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
103383928 (tsc2)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103383928 (tsc2)
09143 Cell growth and death
04115 p53 signaling pathway
103383928 (tsc2)
04218 Cellular senescence
103383928 (tsc2)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
103383928 (tsc2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103383928 (tsc2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csem01009
]
103383928 (tsc2)
Protein phosphatases and associated proteins [BR:
csem01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103383928 (tsc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tuberin
DUF3384
Rap_GAP
HEAT
Motif
Other DBs
NCBI-GeneID:
103383928
NCBI-ProteinID:
XP_008315481
LinkDB
All DBs
Position
9:12633643..12653968
Genome browser
AA seq
1868 aa
AA seq
DB search
MNKQPSKESLKDKVKGIFGLGPARPPSRQSDSKSSEIIITNDIIKELHPDCGLNTRIRMI
NYVCELAKTKKFEEHAVETVWKSVEDMLVPEQPPEARHAVLQLLKAIIQGQGEHFGPLRA
YFFKVIRDYQPSNEDLSYRLDVFKALTEDGKDITYLEEDIAFFVLLWMDIGLTSDFLHVL
VNLVKFNSCYLDQNVSVMVQKICLLCNRTISSTDIEVALQVLDAVVCYNCLPSDSLIVFI
ITLCRTVNVKEFCESCWKLMRKVLGTHLGHSAIYTMCRIMEERVYMEDAPLLRGAVFFVG
MALWGAHRLPALKNTPTLVLPSFYKAMSCANEVVSYEIVLSITRLIKKYGKELQVVTWDI
LLGIIERLLQQIQTIGSAELKVIVYELLTTVEELYDQNDYHGSTEKFFSLVEKCADKRPD
ASVLTLISYRAQSIQPAKDGWIQSLYHLMEKFFKNETRSVIRIKVLHILSFVLSTNRQLY
EDELIEIVVIPLLSGIAEDRDLAVRKQATQLLVDLAEGCNTHHFTSLLDIIERVASCSLV
CSETPEFSERDPTLESPVEDVRTAVLGLLEILQSKLYSLPVSHASRVYELLINHLQLHYR
NKYCSAIASSIRLQVFDFFLMMRADSLHRLGVPNKDGVIRFSPYCYCDTGETEKRVNEKK
TIGTTSPPADRAATLAPPLSASSVRSAYLPYAPAFSVILQCLKMEVDWKVLKLVLDKLPW
TLQYKVLLLTSPCSLDLLCSNLCYMVTDRLISERLKKTPEGFSRTDVQLAVVPVLTALTS
YHNYLEQSRQRELVQCLETGLIYRCAKQCVVALTMCTVEMPDIMIKLLPAFIVKLTHISA
TVAMASPMLEFLSTLVRLPHLYANFVAEQYVSVFAISLPYTNPSKFNQYIVSLAHHVIAM
WFIRCRLPFRKDFVQYITKGLRSNALLPFDDSHEQSPFRARSTSLNERPKSLRAAKVANA
AAAVANSSGSPVKELRDLSAIDAFRSRSISVSEHAVRRMHTSTTTCSLGAADENAVTQAD
EGLKTVHLELTETCLDMMARYVFSNFSALPKRSPIAEFLLAGGRSMTWLVGNKLVTITTS
AGVRTQALLGLDMAERLAGGVGELTRSDPSLHTRITKEAPAKLESQSSQQNRAARIRVRS
MSGGHALRTGPLQSLSPLVSSFEGELAAPPSHCSGPTLDPLGTPPCTSATSSVPSPFKDN
PSLADFVPILTQGWAEIFIRRPSGNTSWLMCLENPPSPFSSEIGNIPLQELSSVLMAMKG
VKEPPTQTSSDPTSTAAPAPTQLSDSPTQTYSSAGGKAHLIQRSNTESVVVLEGSGVKAS
AHTTSDWVESKDFEPLTTDPIFKSADSFTKTPATLSRSSSTSSQDGDKSTLEEISEGAIP
IDLPTPGTFTPGKQGSELSFQTHSQSQGHGLNKSSSSPELQTLPEAFTKGVIESETVLPD
TSRPRAPSVGKLQCQQPHFENEKLEINTVDKINGSGGQTQNTEGPGAPSAQSGGAGLRLE
FPAAAQPGPVSPGGGHRPRGHTISVSAPSSRRERRNERDSYLNRPGSSNAEKLSGLSPSF
VFLQLYHSPFFGNEANKPLLLPKTQVIDRAVKVLDQMPPYDTHKIGVVFVGAGQVNNEVA
ILSNEYGSNRYTGFLTGLGKLIHLKDCDPDQIFLGGLDQYGDDGEFTYCWHDDIMQAIFH
IATLMPNRESDKGCCNKKRHIGNDFVMVVYNDSGEDYKLGTIKGQFNFVEVIIKPLDYEC
NLVTLQCRKDLEKLVDTSVAKIISDRNLPLLVRQMALHANMASLVHQYRANPSDAYASKW
LARLRHIKRIRTRAQEDIQSRSTPSISLTQVHSQQNKSFQQSAPAPNPETSGQRKRLVST
VDDFTDFV
NT seq
5607 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacaaccgagcaaggagagcctgaaggataaggtgaaggggatatttgggcta
ggtcctgctcgcccacccagtcgacaaagtgattcaaaatcatctgaaattataatcaca
aatgacatcataaaggagctacacccagattgtggtctcaatacaagaattcgtatgatt
aactatgtctgtgaacttgccaaaacaaaaaaatttgaagagcatgcagttgaaactgta
tggaaatcagttgaggatatgctggttccagagcagccacctgaagcccgacacgctgtc
ttacagcttttaaaggctattatacagggacagggagaacactttggtcctttgagagct
tattttttcaaagtgatcagagactaccaaccaagcaatgaagacctctcctataggctg
gatgttttcaaggccttaacagaagatggaaaagatatcacatatcttgaggaagacata
gccttctttgtcctcctgtggatggacataggtctcacatcagactttctccatgttctt
gtaaacctggtgaagttcaatagctgctacctggaccaaaatgtgtcagtcatggtccag
aaaatttgtcttttgtgcaatagaacaatatcatccactgatattgaggttgcgcttcaa
gtactggatgctgtggtgtgttacaactgcctgccttcagactctctcattgtctttatc
atcacactctgtcgaaccgtaaatgtcaaggagttttgtgagtcttgttggaagctgatg
aggaaggtgttagggactcatctaggccacagtgccatttacactatgtgccgaatcatg
gaggaaagggtgtacatggaggacgctccattgttgagaggagctgtattttttgttggc
atggcactttggggggcacacagactccctgccctcaaaaacacacccacactggttttg
ccatccttttataaggctatgtcgtgtgccaatgaggtggtttcctatgaaatcgtcctc
tccatcaccaggctaatcaaaaagtatggcaaggaacttcaggtggtcacctgggacatc
ctgctggggatcattgaacgactgctgcagcaaatccagacgataggcagtgctgagtta
aaggtcattgtctatgagctgttgaccacagtggaggaactctatgaccagaatgattac
cacgggtccacagagaagttcttcagtctggtggagaaatgtgccgacaaaagacctgat
gcatcagtgctgaccctcatctcatatagagcccagtccatccagccagccaaggatggt
tggattcaaagcctttatcatctaatggagaagttttttaagaatgagactcgcagtgtt
ataaggattaaagtgcttcacatcctgtccttcgtcctcagcaccaacagacagctgtac
gaggatgagttaattgaaatagtggtaattccactgctcagtggtatagctgaagaccgg
gacctggctgtcaggaaacaagccacacagctgcttgtagatcttgccgaaggatgtaac
acacaccatttcaccagcctgctggacatcatcgagcgagtggctagttgctctctggtg
tgttcagaaacccccgagttttctgaaagagacccaacactagagtctcctgtggaggat
gttaggacagctgttcttggcctactggaaatcctgcagagcaagctctacagtcttcct
gttagccatgcaagtcgtgtttatgaattactcatcaaccacctgcagcttcactacaga
aacaagtattgttcagctattgcctccagtattagactacaggtatttgacttcttcctg
atgatgcgtgcagactctctgcatcgtcttggcgttcccaacaaagatggagtcattagg
tttagcccttactgctactgtgacacaggggaaacagaaaaacgagttaatgaaaagaag
acaatcggcacaacatctccgcctgctgaccgtgcagccaccctggctcctcctctttca
gcatcctcagtacgctcggcctatctgccgtatgcaccagccttcagtgttattcttcag
tgcctgaagatggaagtggactggaaggttctgaagctcgttcttgacaagctgccatgg
accctgcagtataaagtgctgctactgacatcaccgtgcagcttagatcttctctgttca
aatctctgctacatggttactgatcgtcttatctcggagcgtctaaaaaagactcctgaa
ggattttcccgcactgatgttcaacttgcagtggttcctgtcctcacagctcttacctcc
taccataattatctagagcagtcaagacagagggaactggttcagtgtcttgagactggc
ctcatttaccgttgtgcaaagcagtgtgtagtggccctgacaatgtgtacagtggagatg
cctgacatcatgattaagcttcttcctgcgttcatagtcaagctcacccatatctctgcc
actgttgccatggcatctccaatgctggagtttctgtccactttggtgcgcctcccccat
ctctatgccaactttgtagccgagcagtacgtcagtgtgtttgccatctctctaccctac
accaatccatcgaagtttaaccagtacatcgtatctctggctcatcatgtgatcgcaatg
tggttcatacgctgcagactacccttccgtaaagactttgttcagtatataactaagggt
ttgcgttccaacgcccttttgcctttcgacgacagtcatgagcagagtccatttcgtgcc
aggagcaccagcctcaatgaacgacccaagagtctacgggcggcaaaagtggcaaatgca
gcagcagcagtagccaatagcagcggctctcctgttaaagagctgagggacctgtcagcc
atcgacgctttccgctcccgcagcatcagtgtctccgaacatgctgtccgaaggatgcac
acttcaaccactacatgcagcctcggtgccgctgatgaaaatgcggtgacccaggcagat
gaggggctgaagactgtacacctggagctcactgaaacctgtcttgatatgatggcacga
tacgttttctccaacttctctgcactgccaaagagatctccaattgcagagttcctgttg
gctgggggtcgcagtatgacctggcttgtgggcaacaagctggtgactataacaactagt
gcgggggtcagaactcaggcactactgggtttggacatggctgaacgactggcaggagga
gtgggggaacttacaaggtcagatccgtcactacacactcgaattaccaaagaggctcca
gctaaactggagtcacagtccagccagcagaacagagctgcacgcatccgcgttcgctcc
atgtcaggggggcatgctctacgcacaggtcctttgcagagtctgagtcctcttgtgtca
tcatttgagggggagttagctgcccctccctctcactgctctggtccgacccttgatccc
ctgggcactcccccctgcacctctgctacatcctcagttccgtcacctttcaaagacaac
cccagtctggctgactttgtccctatactcacgcagggttgggcagagatcttcatccgc
agaccatctggtaacacgagctggctgatgtgtctggagaatccacccagtcccttctcc
tctgagattggcaacatacctctgcaggagctctccagtgtcctgatggccatgaaagga
gtgaaagaacctccgacccagaccagtagtgatcccaccagcacggcagctcctgcacca
acacagctgtctgattccccaacccaaacgtacagcagtgcaggaggaaaggcacatctg
atccagcgctcaaacacagagtcggtggtggtgttggaggggtcaggagtcaaagcatca
gcacacacgacttctgattgggtggagagcaaagacttcgagccactgactactgatccc
atttttaagtctgctgacagtttcaccaagactcccgcaacacttagcaggtcatcctcc
acctccagtcaggatggtgataagtcaacactggaagaaataagtgagggagcgattccc
attgatctgcccaccccaggaactttcaccccagggaaacaggggtctgagctttctttt
cagactcactctcagtcccagggtcatggactcaacaagtccagctcctcacctgaactg
cagacattacctgaagccttcaccaagggagtgattgagtcagagacagtgttgccagac
acctcacggccaagagcgccttcagttggcaaacttcagtgccagcagcctcactttgaa
aatgagaaattagaaataaacacggtagataaaataaatgggtcaggaggtcaaacccaa
aacaccgaaggtccaggtgcaccttctgcacagagtggaggcgcagggttgaggttggag
tttccagcagcagcacaacctggacctgtctcccccggtggaggccaccgtcctcggggt
cataccatttcagtatcagccccctcctccaggagggagaggaggaacgagagggactcg
tatctcaatcgaccaggatctagcaacgcagaaaagctttcaggactgagtccaagcttt
gtcttcctgcaactttaccattctcccttctttggcaatgaggccaacaagccactgctg
ttgcccaaaactcaggtgattgaccgtgctgtgaaggtcctggaccagatgccaccgtac
gacacacataaaattggagttgtgtttgtgggagctggacaggtaaacaatgaggtggcc
attctgtcaaatgagtacggttcaaaccgatacacaggatttctaacaggccttggcaaa
ttgatacacctcaaagactgtgaccctgaccagatctttctcggagggcttgaccagtac
ggagatgacggggagttcacctactgctggcacgatgacatcatgcaagctatcttccac
attgccactctgatgccgaacagggagagcgacaaaggctgctgcaacaaaaagcgtcat
attggcaacgattttgtcatggtggtgtacaatgactctggagaggactacaaactgggc
actatcaagggtcagttcaacttcgttgaagttattattaagccactggactacgaatgt
aacctggtaaccctccagtgccgcaaagacctggagaaactggtcgacacgtcggtggca
aaaataatttcagaccgcaaccttccacttttagtcagacagatggctctgcacgcaaat
atggcttcgttggtgcatcagtacagagcaaacccctctgatgcttatgcgtccaagtgg
ctcgcacgattaagacacattaaaaggatcaggaccagggcccaagaggacattcagtct
cgctcgactcccagcatctccctgacccaagtgcacagtcagcagaacaaatcatttcag
cagagcgctccagcaccaaaccctgaaacgtcagggcagaggaagagacttgtgtccaca
gtggatgattttactgattttgtttga
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integrated database retrieval system