Cynoglossus semilaevis (tongue sole): 103383935
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Entry
103383935 CDS
T04866
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4 isoform X2
KO
K07573
exosome complex component CSL4
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103383935 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103383935 (exosc1)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
103383935 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
103383935 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
PCB_OB
Motif
Other DBs
NCBI-GeneID:
103383935
NCBI-ProteinID:
XP_008315498
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All DBs
Position
9:12712956..12716388
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AA seq
200 aa
AA seq
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MVLLSNMSPMKLCVPGDKLCSTEDCMPGTGVYLRHGYIYSSLAGYVIKKNEGEELPVISV
VRETETQLLPDVGAIVTCKVTSINPRYAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDK
VETYKSFRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMIPISWCEMQCP
RTHVKEFRKVARVQPEYLHA
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggttcttctctcaaacatgtcgcccatgaagctgtgtgttccaggtgacaaattatgc
agcacggaggactgtatgcccggcactggtgtgtatcttcggcacggctacatatattcc
tcattagcaggctacgtcatcaaaaaaaatgaaggagaagagttacctgtgatttcagta
gtgagggaaacagaaactcagctgctgccagatgtgggagcaattgtcacttgtaaggtg
accagcataaatcccaggtatgccaaggttcacattctgtatgtaggctccacgccgctg
aaggaccgcttcagagggacaatcagaaaagaagatgtacgtgcaacagaaaaggacaag
gtggagacatacaaaagtttcagacctggtgacattgtccttgcaaaagtgatttctctt
ggtgatgtccaatctaactatttgttgacaactgcagaaaatgaactgggagttgtcgtt
gcacacagtgaagcaggtgctcagatgattcccatcagctggtgtgaaatgcagtgtcca
aggacccacgtcaaagagttccgcaaagtggcaagagtgcagcctgagtatctgcacgcg
tga
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