Cynoglossus semilaevis (tongue sole): 103384008
Help
Entry
103384008 CDS
T04866
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103384008 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csem03021
]
103384008 (taf5)
03036 Chromosome and associated proteins [BR:
csem03036
]
103384008 (taf5)
Transcription machinery [BR:
csem03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103384008 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
103384008 (taf5)
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
103384008 (taf5)
STAGA complex
103384008 (taf5)
TFTC complex
103384008 (taf5)
SAGA complex
103384008 (taf5)
SLIK complex
103384008 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
NBCH_WD40
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
PEP5_VPS11_N
WD40_like
LisH_TPL
LisH_PAC1
DUF4144
Peptidase_M7
Motif
Other DBs
NCBI-GeneID:
103384008
NCBI-ProteinID:
XP_008315589
UniProt:
A0A3P8VTU5
LinkDB
All DBs
Position
9:complement(13867968..13873258)
Genome browser
AA seq
756 aa
AA seq
DB search
MAAVQGGLVDAGAEKDIKSEQSTDGWANNNNTNDGRLLSASPGSNASTGSNSKTTAPVAA
GDTEDQQTLLAVLQFLRKNKLSDSVEVLRREAGLPEDLLDTKSGDSSGTGSGGAAGSADT
EAGDSSSLLSRVTISSSTAAPSPKKALSGGDQPDVSVVLSAYSQQGDPALYETYYSGLKK
FIESVLDCHRAELSQLFYPLFVHMYLELVYNNHESEAKAFFEKFNGDQECYYQDDLRVLS
SLTKKEHMRGNETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLFIDIFD
GMPRSKSQIDAMSGSLAGEAKREANKTKVYYGLLKEPEIELPLDDEDDEAENEEGKPKKK
KPKKDSMGSKSKKQDPNAPSQNRIPLPELKDSDKLDKIMYMKEATKRIRLGPDNLPSVCF
YTFLNAYQGLTAVDFTDDSSLLAGGFADSTVRVWSITPKKLCKVKSAADLNLIDKESDDV
LERIMDEKTASESKVLYGHSGPVYSISFSPDRNYLLSSSEDGTARLWSLLTFTCLVGYKG
HNYPVWDTHFSPHGYYFVSGGHDRVARLWATDHYQPLRIFSGHLADVTCTHFHPNSNYVA
TGSSDRTIRLWDVLNGNCVRIFTGHKGPIHALAFSPNGKFLASGATDGRVLLWDIGHGLM
IGELKGHTDTIYALKCSRDGEILASGSMDNTVRLWDSMKAFDDLETDDFTAATGHIHLQD
NSPELLLGTYMTKSTPVVHLHFTRRNLLLAAGAYNP
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtacaaggtggtctggtcgatgcaggcgcggaaaaagacataaaatcggaa
caatcgactgacggttgggctaacaacaataacacaaacgatggtagacttctctctgct
tccccaggctccaatgcatcgacaggaagcaacagcaagacgacggcgccggtggcggcg
ggagacacagaggaccagcagacccttctggcagttttgcaattcctacgcaaaaacaaa
ctgtctgattcggtcgaagtgttgcgtcgtgaagcgggattaccagaagatttgctggat
actaaaagcggcgactcctcagggacaggctccggaggtgctgcgggcagtgcggacaca
gaagccggtgactcgagctctctgctcagtcgggtgactatctcatcctccactgcagcc
ccatcccccaaaaaagctctgagtgggggggaccagcctgatgtcagcgtggttctctca
gcttatagtcagcagggagatccagctctgtatgagacctactacagtggcctgaagaag
ttcatagaatcggttttggactgtcacagagcagagttgtcgcagctcttttacccactg
tttgtacacatgtacctggagctggtgtacaacaaccatgaaagtgaggccaaggctttc
tttgaaaagtttaatggggaccaggagtgctactatcaagatgacctgcgtgttttgtcc
agcctgacgaagaaggagcacatgaggggcaacgaaactctcctcgacttccgcaccagc
aagtttgtcctgcgaatctcccgcgactcctaccagctgctgaagcgacacctgcaggag
cggcaaaacaaccagatctggaacatcatccaggagcatctgttcattgacatctttgat
gggatgccacgcagcaagagtcagattgacgccatgtccggcagcttggctggagaggcc
aagagagaagccaataagaccaaggtttactacggattacttaaggaaccagaaatcgag
ctgcctcttgacgacgaggatgatgaggcagaaaatgaggaaggcaaacccaaaaaaaag
aaaccgaaaaaggacagtatgggttcaaagagcaagaagcaggatccaaacgcaccttca
caaaataggatacctttgcctgagttaaaagattcagacaaactggataagatcatgtac
atgaaggaagccaccaaaaggatccgtctgggaccggataacctcccttctgtctgtttc
tacacttttctcaacgcgtaccagggtttgactgcagtcgacttcacagatgactccagt
ttgctggcaggaggcttcgctgactccacggtgagggtttggagcatcacaccaaagaag
ctctgcaaggtcaagtctgcagcagacttgaatctaattgacaaagagtctgatgatgtg
ttggagaggatcatggacgagaagacggccagcgagtcaaaggtcctgtatggacacagt
ggtccagtgtacagcatcagtttcagtcccgacaggaactaccttttgtcgagttctgaa
gacggtaccgccagactgtggagtctcctcacgttcacgtgtcttgtgggctacaagggt
cacaattacccagtgtgggacacacacttttctccacatgggtactactttgtctcagga
ggacatgacagagtggcacgtctgtgggcgacagatcactaccagcccctcaggatcttc
tctggccacctggccgacgtcacctgcacccactttcaccccaactctaattacgtagcg
acagggtcatctgaccgaaccatccgcctttgggacgtcctgaatggaaactgcgtacgg
attttcactggtcataagggcccgatccatgcactggccttctctcccaatgggaagttc
ctggcctctggggccacagatggacgagtccttctgtgggacatcggacatggactgatg
atcggagagctcaaaggccacacagataccatctacgctctgaagtgcagcagggatggt
gagatccttgcctcaggttcaatggacaacacagtccgtctgtgggactccatgaaagct
tttgatgatttagagactgatgacttcacagcagccacaggacacattcatctacaggac
aactccccggagctcctgctgggcacatacatgaccaagtcaacacctgtggttcacctc
cacttcaccaggaggaatctgctgctggctgctggggcctacaacccgtag
DBGET
integrated database retrieval system
