Cynoglossus semilaevis (tongue sole): 103384135
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Entry
103384135 CDS
T04866
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem02010
ABC transporters
csem04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103384135
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103384135
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csem02000
]
103384135
Transporters [BR:
csem02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
103384135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
103384135
NCBI-ProteinID:
XP_008315757
UniProt:
A0A3P8W217
LinkDB
All DBs
Position
9:complement(15788908..15816347)
Genome browser
AA seq
2268 aa
AA seq
DB search
MAVSTQLGLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRMHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRNPTPGESPAVVGNFNDSIISRLFIDAKKVLLFSQNDK
SYEGYKGLLRALRKLQKNTARFKLKDFLRDNETLSHFLHHNASLPHHALKQIVDADVNLE
KVLTKGFGFHLRDLCNSTPLEEFVHIADHNVSLMTQEIICKSSSDWLDSAQSHFLSNLDF
LKPIRKDVRSDPKVVQEVSAATDILLESLGALAVEFAGMNSWRDMRNEILYLTANATGSP
KQMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGTHGNDSDTEPLSAYDNTSTPFC
NNMMRNLESSPISRMIWRALKPLLLGKILYTPDTPATQRIIHEVNKTFQEFGVLRDLGKV
WEEIRPKIWSFMENSEEMDLVRTLLQNNASAAFLNAQLSGTEWRVSDVFDFLSKASEDQR
PAGSAYTWREVFNETDQAVQTISRFMECVNLDKLEPVANEERLVNKSMGLLHNQKFWAGI
VFPDVDGANSTDLPPNINYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSY
LQDVIEQGIIRAVTGTKERTGVYIQQMPYPCYVDDMFLRVMSRSMPLFMTLAWMYSVAII
IKGVVYEKEARLKETMRIMGLNNGILWLSWFISSLIPLLTSAGLLVMLLKMGNLLPYSDS
GVVFLFLGSFGVVTIMQCFLISTLFSRANLAAACGGIFYFTLYLPYVLCVAWQDYIGFGA
KIVVSLLSPVAFGFGCEYLSLFEEQGVGIQWSNLLASPLEEDSYNLTTSICLMLFDAVLY
GIMTWYIEAVFPGQYGIPRPWYFPFTRTYWCGEKQNKDIASSLSKKGNADAVCIEEEPGQ
IDPGVYIENLIKVYSHGKKLAVDGLTLKFYEGQITSFLGHNGAGKTTTMSILTGLFPPTS
GTAYILGKDIRTELSTIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLPKEQVEAEMDQ
IVNDVGLPHKRKSRSNTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLL
LKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKRDY
DLALHSCRNSASTVCYSKKTSEKEDSVSESSSDAGLGSEPESETTTIDVSLISNIIFKHV
PESRLVEDLGHEITYVLPYQSAKDGTFVELFHELDDRLTDLGISSYGISDTTLEEIFLKV
AEDSGVDTVQLSDGVVPTRTRRRHAFGDHQSCLKPFTEDDFDFNDSEESRETDWLSGTDG
KGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFLAQIVLPAVFVCIALVFSLIVPPFGK
YPSLALDPGMYGEQFTFISNDLPEDSHTSKLLGALTEKPGFGTRCMDGASILNASCNAVG
EWSLPQVSQGLKDIFDKGNWTMEHPSPLCECSCEGRKRMLPECPAGAGGLPPPQVKISDT
DTLQNLTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARGSQLLSHKDEIDVA
IAHLRKRFHLERGTAADRFFHSLSSFIQGLDTNNNVKIWFNNKGWHSIGSFLNVMNNAIL
RASLPPGKNPAKFGITAHNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFVV
FLIQERVNKAKHMQFISGVQPLLYWLANFVWDMCNYIVPATLVIIIFICFQQDAYVSSTN
LPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFGSN
EIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKNLF
AMAIEGVIFFTITVLIQYHFFFKARSSASHLKPIGEEDEDVARERQRILGGGGQSDILEL
RELTKIYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSVVTSGEAYLAG
KSVNTEINEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRKLGL
VKYVDKAAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNAILSIIKEG
RSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPDLRP
VMEFIERELPGSTLKERHRNMLQYQLASSLTSLARIFSLLSVHKEALSIEDYSVSQTTLD
QVFVNFAKDQSDEDSLKDVHLNKRDAVVVDCSQLNSFLMDNKTRESCV
NT seq
6807 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctccactcagctgggtttactgctatggaaaaacttcacctaccgacggcgt
cagacaatccaactgctgattgagattatctggccgctgtttattttcttcatcctgatc
tcggtccgaatgcactatccgccctacgagcaacatgaatgccatttccccaacaaggcc
atgccctctgctggcacactgccgtgggttcaaggaatcatctgcaacgccaacaacccc
tgtttccgcaatcctactccaggagagagtcctgcagtggtgggaaacttcaacgactcc
ataatctcccgcctgtttattgatgccaaaaaggtcttgctcttctctcagaatgataag
agctatgaaggctacaagggtctgctgagggccctcaggaagctgcagaagaacactgca
cgtttcaagttaaaggactttttgcgagacaacgagacgctttcccacttcctgcaccac
aatgcctcgctacctcaccatgcattgaagcagatcgttgatgctgatgtcaaccttgaa
aaggtcctgacaaaaggttttggctttcatctgagagacctgtgtaacagcacccctctg
gaagagtttgtacacattgcggaccacaacgtgtccctgatgacgcaagaaattatctgc
aagtcctccagcgactggttagatagcgctcaaagccacttcctgtctaatctggacttt
ctgaaacctattcggaaggacgtcaggtcagatcctaaagtggttcaggaagtctcagct
gccactgacattcttctggagagcctcggtgcacttgctgtggagtttgcaggaatgaac
agctggagagatatgagaaatgagatcctgtatctgactgcaaatgccacgggctctcca
aaacagatgtaccaggccgtgtcacgtatagtctgtggacaccccgagggaggtggcctc
aaaattaagtctctaaactggtatgaagacaacaactacaaagccctgtttggaacccat
ggcaatgacagcgacactgaacccctctctgcctacgacaacacttccactcccttctgt
aacaacatgatgcgtaacctggagtccagccccatatccaggatgatctggagagctttg
aagccactgctcctggggaagatcctgtacacgccagacaccccagccacccagaggatc
atccatgaagttaacaagaccttccaggaatttggtgtgctgagagatttaggcaaagtg
tgggaggagatcagacccaaaatctggagctttatggaaaatagtgaagaaatggacttg
gttaggaccctgctacagaacaatgcaagtgctgcattcctcaatgcccagctcagtgga
actgagtggcgtgtgtcagacgtgtttgacttcctgtcaaaggcgtctgaggaccagcgg
cctgcaggatcagcttacacctggagagaggttttcaacgaaacggaccaggctgtacaa
accatatcacgctttatggagtgtgtgaacctggacaagctggagcctgtagctaatgag
gagagactggtcaacaagtccatgggtctcttgcacaaccagaaattctgggccggaatt
gtgtttcctgacgtcgacggggccaacagcaccgacctgcctcccaacatcaactacaag
atccgcatggacatcgataatgtggagaggacaaataagattaaagacgggtactgggat
cctggtcccagagcagacccttttgaagatcttcggtacatttggggaggattctcttac
ctgcaggacgtcattgagcaaggcatcatcagagctgtcactggcaccaaggagaggacc
ggcgtctacattcagcagatgccctacccctgttatgttgatgacatgttccttcgggtt
atgagtcgatccatgcctctcttcatgacgctggcatggatgtactctgtggccatcatc
atcaaaggcgttgtgtacgagaaagaagccaggctgaaggagacgatgagaatcatggga
ctgaacaacggcatcctgtggctcagctggttcatcagcagtctaatccctctgctgacc
agcgcgggcttgttggtgatgcttctaaagatgggaaacctgctgccctacagtgactct
ggcgtggtgtttctcttcctgggatcattcggtgtggttaccatcatgcagtgtttcctc
attagcaccctgttctctcgcgctaacctggcagctgcctgtgggggcatattttacttc
actctatacctgccctacgtgctgtgtgtggcctggcaagactacatcggctttggagcc
aaaatcgttgtgagcctgctctcacctgtggcttttgggtttggatgtgaatacttatca
ttgtttgaggaacaaggtgtggggatccagtggtccaatctgctggctagtcctcttgag
gaagacagctacaacctcaccacctccatctgtctcatgctgtttgacgctgtcctgtac
ggaataatgacctggtacattgaggctgtgtttcctggtcagtatggaatccccagacct
tggtattttccttttacgagaacatactggtgtggagagaagcaaaacaaggacatcgcc
tccagcctgtccaagaagggcaatgctgatgcagtgtgtattgaggaggagccaggacaa
attgatccaggtgtttacatcgagaacctgatcaaggtctacagccatgggaagaagctg
gctgtggacggcctgacactgaagttctatgagggacagatcacctcctttctcggacac
aacggggcagggaaaaccacaaccatgtcaatcctgacgggattgttccctcccacctct
ggtacagcgtacatcctcggcaaagacattcgcaccgagctcagcaccatcagacagaac
ctgggggtctgtcctcagcacaacgtcctcttcagcatgctgactgtcgaggagcacatc
tggttttacgcccgtcttaaggggcttcctaaggagcaggtggaggctgagatggatcag
atcgtgaacgatgttggactgcctcacaaacgaaagtctcgctccaacaccctgtcaggt
gggatgcagaggaagctctcagtggctcttgcttttgttggtggctcaaaggttgtgatt
ttggatgaacctacagccggggtggatccttacgcacgtaggggcatctgggacctgctg
ctgaaatacagacaaggtcgaaccattatcctgtcgactcatcacatggatgaggctgac
atactgggcgatcgtattgccatcatttcgcacggcaagctgtgctgcgtgggctcttca
ctcttcctgaaaacccaattgggaacagggtactatctgacgctggttaaaagagactac
gacctggcgctacactcctgcaggaactctgccagtacggtgtgctacagcaagaagacg
agcgagaaggaggacagtgtgtcagagagcagttcagacgctggactgggcagtgaacca
gagagtgaaaccaccaccattgatgtgtccctcatctctaatatcatattcaagcacgtc
ccagagtctcgcctagtggaggatcttggccacgaaattacctacgtcctaccctaccaa
tctgccaaggatgggacctttgtggaactcttccacgagctcgatgaccgactaacggat
ctgggaatatccagctatgggatatctgacaccaccctggaggagatcttcttgaaagtt
gccgaggacagtggagtggacactgtccagctgtcagatggagtcgtaccaaccaggact
cgtcgtcgtcacgcttttggagaccaccagagctgtctgaagcccttcaccgaagatgac
tttgatttcaatgactctgaagaatcccgtgagactgattggctcagtggaacagatggc
aaaggctcataccaggtcaaaggctggagtctaaaaagacagcagtttgttgcactactc
tggaaacgattcctttatgctcggcgttcccggaagggatttcttgctcagattgttctc
cctgcagtgtttgtctgcatcgctctggtgttcagcttgattgttcctccgttcggaaag
tatcccagtttggctttggatcctggcatgtatggagagcagttcacctttatcagtaat
gacttacctgaggattcacacacatctaaattactgggagctctgacagaaaaaccaggt
tttggaacacgttgcatggacggagcctctattttgaatgcatcttgcaatgcagtaggc
gagtggtcactgccacaagtctctcagggcctgaaagacatatttgacaaaggcaactgg
acaatggagcatccatcgcccctctgtgaatgcagctgtgaaggccgcaagagaatgctg
ccagagtgtccggctggagctggtggacttccaccaccgcaggtgaaaatcagtgacaca
gacacacttcagaatttgactggcagaaacatctcagactacctggtgaaaacatatgcc
cagattattggcaagagcctgaagaacaagatctgggtcaatgagttcagatacggtgga
ttctcactgggtgccagaggttctcagcttttgtcccacaaagatgaaatcgatgttgca
atcgcacatttgaggaaacgcttccatctggaacggggaactgcagcagatcgtttcttc
cacagtctctccagttttatccaaggattggacacaaataataatgtcaagatctggttc
aataacaaaggctggcacagcatcggctcttttctcaacgtgatgaacaacgccatcctc
cgggcaagccttccacctggcaaaaacccagcaaagtttggcatcactgcccacaatcac
cccctcaaccttacaaaggagcagttatcgcaggttgcactgatgacgacttcagtggac
gttctggtgtcaatttgcgtgatctttgccatgtcatttgtcccggccagttttgtggtt
ttcctcattcaagagcgagtgaacaaggcaaagcacatgcagttcatcagtggagttcag
cccctcctgtactggctggccaactttgtatgggacatgtgcaactacattgttccagcc
actctggttatcatcatctttatttgtttccaacaagacgcctacgtgtcctccactaat
ctgccggtgctggccctgctgctgctgctttatgggtggtcgatcacacccctgatgtac
ccagcatcattcttctttaagatccccagcacagcctacgtagttttaaccagcgtcaac
atactgataggaatcaatggcagtgtctccacatttgtcctggaactattcgggagtaac
gaaattggcggcatcaatgacatcctgaagaacgtgttccttatctttccacacttctgt
ctgggcagaggactgattgacatggtgaagaatcaggccatggctgatgctctagagagg
tttggcgaaaaccgtttccgttcacccctggcctgggacatggtgggaaaaaacctgttt
gcaatggcaatagagggcgtcatcttcttcactatcactgtgctgattcagtatcacttc
ttcttcaaagccagatcctctgccagtcatctgaagcccattggagaagaggatgaagac
gtggccagagagcgacagaggattttaggaggaggaggacagtctgacatcctggagctg
agagaactcaccaagatttacaagcggaaacagaagccggcggtggatcggctgtgtgtt
gggattcccccgggagagtgttttggtttgctgggagtcaacggtgccgggaaaaccagc
acttttaaaatgctgaccggagactcagtggtgaccagtggggaggcctacctggcaggc
aaaagtgttaacacagagatcaatgaagtgcaccagaacatgggttactgtcctcagttt
gatgctattaatgacttactgactggaagagagcatctggagttttacgccatcctgaga
ggagttccagagaaagaagtgtgcgaggtggcagagtggggaatcagaaagctgggcttg
gtaaagtacgtggacaaagctgcaggaagctacagtggaggaaacatgaggaaactgtcc
actgccatcgctctcataggaggtccacctgtggtctttctggacgaaccaacgacgggc
atggaccctaaggcgagacgagccttatggaacgccatcctcagcatcatcaaagagggg
cgatctgtagtgttgacctctcacagtatggaagagtgtgaagctctttgtaccaggatg
gctatcatggtgaatggcaggttccgttgcctgggcagcgtgcagcacctcaagaacagg
tttggagatggttacaccatcattctgcgagtggcagggccagaccctgaccttcgacct
gtgatggagttcattgaacgggagcttccagggagcacgttaaaggagagacaccgtaac
atgctgcagtaccagctggcctcgtctctcacctctctcgcccgcatcttctccctgctg
tctgtccacaaggaggcgctcagcatagaggactactccgtctcccagaccaccttggac
caagtgtttgtaaatttcgccaaggaccaaagtgacgaggacagtttgaaagatgtccat
ctgaataaacgggatgcagtggtggtggactgttcccagttgaactccttcctcatggac
aacaagaccagggaaagctgcgtctga
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integrated database retrieval system
