Cynoglossus semilaevis (tongue sole): 103384197 Help Entry 103384197         CDS       T04866                                  Symbol htt Name (RefSeq) huntingtin isoform X1   KO K04533   huntingtin Organism csem  Cynoglossus semilaevis (tongue sole) Brite KEGG Orthology (KO) [BR:csem00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:csem03019]     103384197 (htt)    04131 Membrane trafficking [BR:csem04131]     103384197 (htt)    03029 Mitochondrial biogenesis [BR:csem03029]     103384197 (htt) Messenger RNA biogenesis [BR:csem03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      103384197 (htt) Membrane trafficking [BR:csem04131]  Endocytosis   Rab GTPases and associated proteins    Rab associated proteins     103384197 (htt) Mitochondrial biogenesis [BR:csem03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     103384197 (htt) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Htt_C-HEAT Htt_N-HEAT Htt_bridge Htt_N-HEAT_1 HEAT HEAT_2 Vac14_Fab1_bd HEAT_ECM29 GNC1_N Motif Other DBs NCBI-GeneID:  103384197 NCBI-ProteinID:  XP_016890531 LinkDB All DBs Position 9:complement(16627246..16654983) Genome browser AA seq 3188 aa AA seqDB search MATMEKLMKAFESLKSFQQQQGPPTAEELVQRQKKEQATTKKDRVTHCLTICENIVAQSL RTSPEFQKLLGIAMEMFLLCTDDSESDVRMVADECLNKIIKALMDSNLPRLQLELYKEIK KNGASRSLRAALWRFAELAHLIRPQKCRPYLVNLLPCLTRITKRQEETVQETLAAAMPKI VLSLGHFANDGEIKLLLKSFVANLKSSSPTIRRTAASSAVTVCQHSRRSSYFYTWLLNVL LGLLVPVDEEHPSHLILGVLLTLRYLMPLLQQQVNTTSLKGSFGVMRKEADVQPTPEQLL AVYELTLHYTQHWDHNVVTAALELLQQMFRTPPPELLHMLITPGSIPQATVFRQDPESRA RSGSILELIGGSSCSPLLLRKQRGKMLSGEEDGLEDDPERAEVTASAFTASVVGADGSSA AQVDIITEQPRSSQHTLQPGDSVDLSASSDQGGGGGTSTSDTPESPNDNEEEMLSRSSSG GANITPETTEYTTPENATPEGGPLGQSGSLIDSNDPSLPPSDSSQTTTEGPDSAVTPSDV AELVLDGSESQYSGMQIGTLQDEEDEGTAPSSQEEAPEPFLQSALALSKPHLFEGRGHNR QGSDSSVDRFIPKDEPTESEPDNKQSRVKGSIGHYTDQSLEPLVHCVRLLGASFLRTGQK NGVIPDKEVRVSVKALAVSCVGAAAALLPEAFFNSLYLEPLDGIPVEEQQFVSDVLCLID HGDPQIRGATAILCGAVIQAALTKSHYNIHTWLASVQGSTGNPLSLVDLVPLLQKTLKDD SSVTCKMACSAVRHCIMTICNSTLSELGLQLVVNLQPLRDSSYWLVRTELLDTLAEMDFR LINFLERKTETLHKGDHHYTGRLRLQDRVLSDVMIHLLGDDDPRVRHVAATAVSKLVPRL FYDCDQGQVDPVVAVARDQSSVYLQLLMHEAQPPSQFTISTITRTYRGYNLSTAVSDVTL ENNLSRVVTAVSHALASSTSRALTFGCCEALCLLAANFPVCTWTTGWHCGYISSSNSFSS RSTLNRSRARTLSLSQPNTASGSCTNSSSSDSERRTLTVGMTNMVLSLLSSAWFPLDLSA HQDALLFSGNLLAAVAPKCMRNPWNGEEESSSSTNSSTGPNKVEEPWAALSERSVVVLVE QLFSHLLKVLNICSHVLDDTPPGPAMKATLPSLSNTPSLSPIRRKGKEKEAAEPSTAPMS PKKSNEVNTGRPADSAASVAVNKSSTFGSFYHLPPYLKLYDVLKATHTNYKVSLDLHSQE KFGSFLRSTLDVLSQLLELATLHDISKCVEEILGYLKSCFSREPTMATVCVQQLLKTLFG TNLASQYEGVLSGPSRSQGKAMRLGSSNLRPGLYHYCFMAPYTHFTQALADASLRNMVQT DQEPDTSGWFDVIQKASNQLRSNIANATRNRGDKNAIHNHIRLFEPLVIKALKQYTTSTS VALQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRDSEAIIPNIFFFL VLLSYERYHSKQIISIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGSNKADAG KELDIQKEVVVSMLLRLVQHHQVLEMFILVLQQCHKENEDKWKRLSRQIADVILPMIAKQ QMYLDSPEALGVLNTLFETVAPSSLRPVDMLLKSMFTVPATMASVATVQLWVSGILAVLR VLVSQSTEDIVLSRVHELSLSPHLLSCSTIQRLHQQSPSSSDPPAADTLQETNGEAQKAA PEETFARFLLQLVGVLLDDISSREIKVDITEQQHTFYCQQLGTLLMCLIHVFKSGMFRRI TAAASRLLKGDNGSGLTVTDTGLFYALEGLNTMMQCLITTHPSLVLLWCQVLLIINYTNY SWWAEVQQTPRRHSLSCTKLLSPHSSDKEQDKPEYQLAMVNREIVRRGALILFCDYVCQN LHDSEHLTWLIVNHVSDLISLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCDNLSTPTM LKKTLQCLEGIHLSQSGSLLMLYVDKLLNTPFRVLARMVDTLACRRVEMLLAETLQNSVA QLPVEELNRIQEYLQTSGLAQRHQRFYSLLDRFRATVADTSSPTPPVTTHPLDGNPPPAP QLVVADKEWYVSLVRSQCCLRGDVSLLETTELLTKLPPADLLSIMSCKDFNLSLLCPCLS LGIQQLARGQGSLLLETGLQVTLEQIAGITGSLPTPHQSFLPPSQPTPYWDKLADVYDEP GFYFRVLCQCRALSQYLLNVNQLPSSLHIPSDKEHLITTFTCTAAEVVVWRLLQDRLPQS VDLQWALSCLCLSLQQPCVWNKLSTAEYSTHTCSLIYCLHLVIVAVAVSPGDQLLHSERK KTKTGDAEGNQVDSAHAGYMCEWKACEIMAELVEGLQNILSLGHYRNSVIPAFLTQTLRN IVISLSRLPLVNSYTRVPPLVWKLGWSPQPGGEFTTTLPEIPVDFLQEKDVFREFLYRIN TLGWSSRTQFEETWATLLGVLVTQPITMDQEEETQQEEDLERTQLNVLAVQAITSLVLSA MTLPTAGNPAVSCLEQQPRNKSLKALETRFGRKLSVVRGEVEREIQALVSKRDNVHTHHP YHAWDPVPSLSAASAGTLISHEKLLLQINTEREMGNMDYKLGQVSIHSVWLGNNITPLRE EEWGEDEEDEVDTPAPASPPLSPINSRKHRAGVDIHSCSQFLLELYSQWLIPGSPCNRRI PTILISEVVRSLLAVSDLFTERNQFDMMFHTLMELQKLHPPEDEILNQYLVPAICKAAAV LGMDKAIAEPVCRLLETTLRSTHLPSRMGALHGVLYVLECDLLDDTAKQLIPIVSEYLVS NLRAIAHCVNLHNQQHVLVMCAVAFYMMENYPLDVGPEFMAGVIQLCGVMVSASEDSTPS IIYHCVLRGLERLLLSEQLSRVDGEALVKLSVDRVNMPSPHRAMAALGLMLTCMYTAVLA SGSDVTGVRGQVDSSSAVAEAMGVTAGHVGLSSGKEKTSPAIRPVHADPQAPDSESIIVA MERVSVLFDRIRKGLPSEARVVSRILPQFLDDFFQPQDVMNKVIGEFLSNQQPYPQFMAT VVYKVFQILHATGQSSMVRDWVLLSLSNFTQRTPVAMAIWSLSCFFVSASTSQWISALLP HVISRMGSSEVVDTNLFCLVAMDFYRHQIDEELDRRAFQSVFEAVASPGSPYYTLLGCLQ SIHQDTSL NT seq 9567 nt NT seq  +upstreamnt  +downstreamnt atggccaccatggagaaactgatgaaggccttcgagtctctgaagtcattccagcaacag caggggccgccgacagcagaggagctcgtccagaggcagaaaaaggaacaggctacaacc aagaaggacagggtgacccactgtctaacaatatgtgaaaacatagtggcccagtctctg agaacatctccagagtttcagaaactgctgggcatcgccatggagatgttcctactctgc acagatgacagtgaatcagacgtgcgaatggtcgccgatgagtgcctgaacaaaatcatc aaagcgctgatggactccaacctgccaagactgcagctggaactttacaaagaaattaaa aagaacggcgcctcccggagtcttagagcagctctgtggaggtttgctgagctggcccac ctcatcagaccacagaagtgcagaccttacctggtcaacctgctgccgtgcctcaccaga atcactaagagacaggaggagactgtacaagaaacactggctgcagcgatgcccaagatt gtgttgtcactggggcactttgccaacgatggcgaaatcaagctgctgctgaagtccttt gtagccaacctgaagtccagctcacccaccatcagacgaacagcagccagttcagctgtc actgtttgccaacactccagacgcagcagctacttctacacctggctcctaaatgtgctt ttgggacttttggttcctgttgatgaagagcaccccagccacctcattcttggagtgttg ttaactctgcgctaccttatgcctctgctgcagcagcaggtcaacaccacaagcctcaaa ggaagctttggagtgatgaggaaggaggcagatgtacagccaacacctgaacagctccta gcggtgtatgagctgacccttcattacacccagcactgggatcacaacgtggtcacagct gctctggagctcctgcagcagatgttcaggactccaccaccagaacttctgcacatgctc atcactcctggcagcattccacaagccactgtgtttcgccaggacccagagagccgtgct cgatctggaagcatcctggagctgataggagggtcttcctgcagtccactccttcttagg aaacagagaggtaaaatgctttctggagaggaggatggtttggaggatgatcctgaaagg gccgaagtgactgcgagtgctttcacagcctcagtggtcggagctgacggctcctccgca gcacaggtcgacatcatcactgagcagccccgttcctctcagcataccctgcagcctgga gactctgtggatctcagtgcctcctcagaccagggtggaggaggtgggacgtccacatca gacactcctgagtcaccaaatgataacgaagaggaaatgctcagtcgcagttccagtggt ggagccaacattacaccagaaaccactgaatacacaactccagaaaatgccacacctgag ggaggtcctctgggacagagtgggtctctgatcgacagtaatgatccatctctaccaccc agcgactcgtcacaaaccaccacggagggaccggactcagctgtcactccttcagatgtg gcagaactggtgctggatggcagtgagagtcagtactctggaatgcagataggaacattg caggatgaagaagacgaaggaacagcgccgtcctcccaggaagaagcaccagaaccattc ctgcagtcggctctggcccttagcaagcctcatctctttgaaggtcgaggtcacaacagg caggggtcagacagcagtgtggatcgcttcataccaaaggatgaacccactgaatccgag cctgataacaagcaatcacgggtaaaaggttctattggacattacacagaccagagtttg gagccactggtgcactgtgttcgtctgcttggcgcttccttcctgcggactggacagaag aatggtgtaattcctgacaaggaggtccgtgtcagtgtaaaagctctggctgtcagctgt gttggagcagcagcagcattacttcctgaagccttcttcaactcactctatctggagccg ctggatggcattccagtagaagagcagcagtttgtcagtgacgtgctgtgcctcattgac catggagaccctcagatcagaggagccacagccatcctctgtggagctgtcatccaggct gcactcaccaaatcgcattacaacatccacacttggctggccagtgttcagggttcaaca ggtaaccctctgtccctggtggacctggtgcctttgctccagaaaaccctcaaggatgac tcttcagtcacctgcaaaatggcttgttctgcagtcaggcactgcatcatgaccatttgt aacagtaccctgagtgagctgggcctgcagttagtggtcaacctgcagcctctgagggac tcgtcctactggctggttcgcactgagctcttggatactttggctgagatggacttcagg ttaataaatttcctggagagaaaaaccgagactttgcacaaaggagatcatcactacact gggcggctgcgactgcaggaccgagtcctcagtgatgtgatgatacatctgttaggtgat gatgaccccagagtgaggcatgtggctgccactgctgttagcaaacttgttcccaggttg ttctacgattgtgatcagggtcaggtggacccagttgtggctgtggcacgagaccagagt tcagtctacttacagctccttatgcatgaggcccaacccccatcacaattcaccatcagc accattacgaggacgtacagaggctacaacctttctacagctgtgtccgatgtcacactg gaaaacaatctgtccagagttgtaactgctgtctcccatgccctcgcgtcctctacctct agggctttaactttcggctgctgcgaagctttgtgtctcttagctgccaatttcccagtg tgcacttggaccacagggtggcactgtggctacattagctccagtaacagcttctcctca cgctcgactctgaaccgcagcagggccaggactcttagcctttcccagcccaacactgcc tcaggctcttgcaccaactcttcatcctcagattcagagcggaggactctgactgtgggt atgaccaacatggtcctgtccttactctcctctgcctggtttccactggatctgtctgca catcaagatgcacttttgttctctggcaatctgctcgctgctgtggcccctaaatgcatg cgtaacccttggaatggagaggaagaaagcagcagcagcacaaacagcagtacaggccca aataaggtggaggaaccctgggctgcactgtctgagcgttcggtggttgtattggtggag cagctgttctcccaccttctgaaagtcctgaacatttgttcccatgtactagatgataca ccacccggtccggcaatgaaggccaccctaccctcccttagcaacaccccgtccctcagc cctattcgcaggaaaggcaaagaaaaggaggctgctgagccctctactgcccccatgagt ccaaagaaaagcaatgaagtcaacacaggtagacctgcagacagtgcagcatctgtagca gtgaacaaatcctccacctttggcagcttctaccacctgccgccctacctcaaactctac gatgtcctcaaagctacacacaccaactacaaggtgtcgctggatctccacagccaggag aagtttgggagtttcctgcgttctactctagatgttctgtctcagctactggagctggcc acgctgcatgacatcagcaagtgtgtggaagagatcctgggatacctcaagtcctgcttc tccagagaaccaaccatggccacagtctgtgttcagcaactcttaaagacactgtttgga acaaacctggcctctcagtatgagggcgtcctgagtggtcccagccgttcccagggcaag gccatgcgtctgggctcatccaacttgcgaccaggcctctaccactactgcttcatggca ccttacacacacttcacccaggccctggctgatgctagtctccgcaatatggtgcagaca gaccaggaaccggacacctctggttggttcgatgtgatccaaaaagcatctaatcagctg aggtccaacattgcaaatgcaacaagaaatagaggagacaagaatgctatccacaaccac atccgactgtttgaaccactggtgataaaggcgctgaagcagtacacaaccagcacctct gtggccctgcagagacaagtgctggaccttctggcccagttggtgcagctaagagtcaac tattgtctgctggactctgatcaggtgttcattggttttgtgctcaagcagtttgaatac attgaagtgggacagttcagagattccgaggccatcattccaaacatcttttttttcctg gtgcttctttcctacgagcgataccactccaagcagataatcagtattcccaagatcatc cagctgtgtgatggcatcatggccagtggcaggaaagctgtcacccacgctatcccagcc ttacagccaatagttcatgacctgtttgtattgaggggctcaaacaaggctgatgcaggc aaagagctggatatacagaaggaggtggtggtatccatgctgctccgactggtgcagcac catcaggtgttggagatgttcatcctggtcctgcagcagtgtcacaaagagaatgaggat aagtggaagagactgtccaggcagattgctgatgtcatccttcccatgattgcaaagcag cagatgtatctggactctcctgaggcgttgggagtgttgaacactctttttgagactgta gcaccctcttctcttaggcctgtagacatgctactgaaaagtatgttcactgtcccagca accatggcctcagtggctacagtgcagctctgggtgtctggtatacttgcagtgctcagg gttcttgtctcccagtccactgaggacattgtcctgtctcgggtccacgagctctccctc tccccacatctcctctcctgcagcacaattcaacggttgcatcagcagagcccttcatct agtgacccgcctgctgccgacacgctccaggaaactaatggtgaagcacaaaaagctgca cctgaagaaacatttgcccgattcctcctccagctggtgggtgtgttgctggatgacatt tcctccagggaaattaaagtggacattactgagcaacaacacaccttctactgccagcag ttggggacactgctcatgtgtctcatacatgtctttaaaagtggaatgtttcgcaggatc acagctgcagccagtcgtttgctgaagggtgataacggtagtgggctgactgtcacagac acaggactcttctacgcattagaaggactgaacactatgatgcagtgcctcatcaccacc cacccctctctggtgctactgtggtgccaggtcctcctcatcatcaactacactaactac tcatggtgggctgaggtccagcagacacctagaagacacagtctctcttgcacaaagttg ctgagccctcactcctcagataaagaacaggacaaacctgagtatcagttagcaatggtc aacagagagattgtacgtaggggagccctcatcctcttctgtgactacgtgtgtcagaac ctccatgactccgagcatctgacctggctcattgttaaccatgtgagtgacctcatcagc ctttcccatgagcctccagtgcaagacttcattagtgccgtgcaccgcaattctgccgcc agtggtctcttcattcaggccatccagtcacgctgtgacaacctcagtacgcctacaatg ctgaagaagactctgcagtgtttagaaggcattcacctgagtcagtctggctctcttctg atgctgtacgtggacaagctgctcaatacacccttcagggttctggctcgtatggtggac acattggcctgtcgcagggtggagatgctactggctgagacactgcagaacagtgttgct cagctgcctgtggaggaactgaacaggattcaggaatatctccagaccagtggcctggct cagaggcaccagaggttctactccctgctggacaggttcagagctactgttgctgacacc agcagccccacaccccctgtaacaacccaccccttagatggaaatcctcctcctgcccct caactggtggttgcagataaagagtggtacgtgtccctggtcaggtcccagtgctgtctt cgtggagacgtttctctgctggagacaacagaactgctcactaaactacctcctgctgac ctattgagcattatgagttgcaaggactttaacctgagcctgctgtgtccatgcctgagt ttgggtattcagcagttagcacggggtcaggggtcgcttctattagagactggcctgcag gtgaccctcgagcaaatagctggaataaccggatcccttcctacaccacaccagtccttc ctaccgccatcccagcccacgccctactgggacaaactcgctgatgtctatgatgagcct ggtttctacttcagggtgttatgccagtgcagagcactctcccagtatctgctgaatgtc aaccagctgccctcatcgcttcatattccctctgataaggagcatctcatcaccactttt acctgcactgcagctgaggtggtggtatggcgtctgctccaggatcggttacctcaaagt gtagacctgcagtgggcgctgtcctgcctctgtttgtctctgcagcagccctgtgtctgg aacaaactttccacagcggagtactctacacacacctgctctctgatttactgtctgcat ctggtcattgttgcagttgctgtgagccctggtgaccagctgctgcattcagaaagaaaa aagacaaagacaggagacgctgaaggaaaccaagtggactctgctcatgctggctacatg tgcgagtggaaagcctgtgaaatcatggctgagttggtggaaggtctgcagaacatcctg tccctgggtcactatagaaacagtgtgatcccagcttttcttacccaaacattgcgtaac atcgtcatcagtttgtcccgactgcccctggtcaacagctacacccgagtccctcctctg gtctggaaactgggctggtcccctcagccaggaggagagtttaccaccacgctacctgag attcctgtggacttcctgcaggagaaagacgtcttcagagagtttctctatcgcatcaac acactgggctggagcagcagaacacagtttgaggaaacctgggccacactgctgggggtg ctggtcacccaacccatcactatggaccaggaagaggaaacacagcaggaggaggacttg gagcgaacacagttgaatgttttggcagtacaggccatcactagcctggtgttgagtgcc atgacccttcccactgctggcaaccctgcagtcagctgtctggaacagcagccacgcaac aagagcctcaaagccctagaaacacggtttggaagaaaactgtcggtcgtcagaggtgag gtggagcgagagattcaggctctagtgtcaaagagagacaacgtccacacacaccatcca taccatgcctgggacccagtgccctcactgtcagcagcctccgcaggaacgctgatcagc cacgagaagctgctgcttcagatcaatactgagagggagatgggaaacatggactacaaa ctgggacaggtctccattcactcagtgtggttgggaaacaacatcactcccctgagggaa gaagagtggggtgaggatgaggaagatgaggtggacactccagcaccagcctctccacca ttgtctcccattaactccaggaagcaccgtgcaggtgtggacatccactcatgttctcag ttcctcctagagctctacagccagtggttgatccctggttccccatgcaacagaagaatt cccaccatccttattagtgaagtggttcgttcgctgctggcagtgtcggaccttttcact gagaggaaccagtttgacatgatgttccacaccctgatggaactgcagaagcttcatcca ccagaggatgaaattctcaatcagtacctggtgcctgccatctgcaaggctgctgcagtg ttgggcatggacaaagcgatagctgagcctgtgtgtcgcctgctggagacgaccctacgc agcacccacttaccaagtcgcatgggagcactgcacggtgttctgtatgtgttagagtgt gatctgttggatgacacggccaagcagctcattcccattgtctcagagtatctggtgtcc aacctcagggctattgctcactgtgtgaacctacataaccagcagcatgtgttagtgatg tgtgccgtagctttctacatgatggagaactaccctctggatgtaggacctgagttcatg gctggagtcattcagttatgtggtgtgatggtgtcggccagtgaagactccaccccctcc atcatctatcactgtgtgctacgtggtctggagcgcctcctgttgtctgagcagttatca cgtgtggacggagaagcactggtcaaactgagcgtggacagagtcaacatgccatcacca cacagggccatggctgcactgggcctcatgctgacctgcatgtacactgcggtgcttgcg tctggttcagacgtgacaggggttagaggtcaggttgactctagctctgctgtagcggag gcgatgggcgtcacggcaggtcatgttggtctctcctcaggaaaggagaaaaccagccct gccattcgcccggttcatgcagaccctcaagctccagatagtgagtccatcatcgtggcc atggagagggtctctgtgctgtttgacaggatcaggaagggtttaccaagtgaggcccgg gtggtgtccaggattctgccccagttcctggacgacttcttccaaccacaggatgtcatg aacaaggtcatcggagagttcctgtccaatcagcagccttacccacaattcatggcaaca gtggtgtataaggtcttccagatccttcatgccacagggcagtcgtccatggttagagac tgggtcttactgtctctgtccaacttcactcagaggacaccagtggccatggccatatgg agcctgtcctgcttctttgtctctgcctccacctctcagtggatctcagccttactgcca cacgtcatcagtagaatgggctccagtgaagtggtggacactaatctgttctgtctggta gccatggatttttaccgacatcagattgacgaggagctggaccgccgggcattccagtct gtctttgaggcagtggcctcgccaggcagtccgtattacacactgctgggctgcctgcag tcgatccaccaggatacgtcactttga

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