Cynoglossus semilaevis (tongue sole): 103384232
Help
Entry
103384232 CDS
T04866
Symbol
trim25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
103384232 (trim25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csem04121
]
103384232 (trim25)
Enzymes [BR:
csem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103384232 (trim25)
Ubiquitin system [BR:
csem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103384232 (trim25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
zf-B_box
RING_XB3-XBAT31
zf-RING_5
Peptidase_S64
Transcript_VP30
Baculo_PEP_C
L1R_F9L
Motif
Other DBs
NCBI-GeneID:
103384232
NCBI-ProteinID:
XP_008315889
LinkDB
All DBs
Position
9:complement(17642636..17647690)
Genome browser
AA seq
614 aa
AA seq
DB search
MAAVEDANMDLMNLEEELTCSICLSTFECPVTIPCGHNFCHNCLFTSWTDSSLTYSCPQC
RTEFPTKPELRKNTVLCTVVETFNLKSTGSQLNLYEEESKEEVQEVEEKEEETIIRCDTC
MLAEACRTCLTCMASFCEEHLRPHKENPIFRPHQLTEPVGDLLERICTDHHKLMELFCTQ
HNTPVCSFCLQQNHKGCSFTSPEEQRMLKESDLRAKLDLLDVKIMKNEACISQMTEIQDT
LKEAADSKKNALTAAYEQLHDMLTQEENAALQAVDAEMHNGQIKLKTLMKKFSQNVTNMN
KAKKSIHSLLSRTQTLDFLQVSCELPAAVKFEPYSPRINLNSSTVMAYQAFPAALKESLT
EVFKQPVESRQLLLRQGRSAEPQDKSEQSRPPHSHSPAPDAQPKAAGTKKKKPQSEKKPA
DIPPNVTSAEQRSHLLKYGTVLTFDPKTVHKRITLTEQFTKATVSEEMANYPNYIQRFTV
CSQVLASKAFSKGRHYWEIRLSCNNFIGLGLALGSIDRKGPNSRLGRNAQSWCVEWFNVK
LSAWHNSMEVVLQNPSPKRVGVLLDCDAGKATFYKVAEMAYPFFTFDIPITEAVYPAFWL
FSSSSSLSLCKLQQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagtagaagacgccaacatggatctgatgaatctggaggaggagctgacctgc
agcatctgtctgagcacctttgaatgcccggtaacaatcccctgtggtcacaacttctgc
cacaactgtctgttcacttcctggaccgacagctccttgacctacagctgtcctcagtgt
cgcactgagtttcccaccaaaccagagctgaggaagaacacagttctctgcaccgtggtg
gagacattcaacctgaagtctactggcagccagctgaacctctacgaagaggagagtaaa
gaagaagtccaggaggtggaggagaaggaagaagagaccatcatccgctgcgacacctgt
atgttagcagaggcgtgtcgtacctgtctcacctgtatggcctcgttctgtgaggagcac
ctgcgcccccacaaggaaaacccaattttccgtccccatcagctgacggagcctgttggt
gacctcctggagcgcatctgtacagaccaccacaagctgatggagcttttctgcacccag
cacaacactcctgtctgcagcttctgcctgcaacaaaaccacaaaggctgctccttcact
tcgcccgaggagcagaggatgctcaaggagtccgacctgagagcaaagctggatttgctg
gatgtaaagataatgaaaaacgaagcttgtataagtcagatgacagagatccaggacacg
ctgaaggaagcagcggacagcaagaagaacgccctgacagctgcatacgagcagctacat
gacatgttgacccaagaggagaatgctgctctgcaggctgtcgatgcagagatgcacaac
ggtcagattaaacttaaaaccctcatgaagaagttttctcagaacgttaccaacatgaat
aaggccaagaagtccatccacagtctgctcagccggacccagacactggacttccttcag
gtttcatgtgaattacctgccgctgtcaaatttgaaccctacagccctcgaatcaacctg
aactccagcacagtgatggcctaccaggccttccctgcagctttaaaggagtctctgact
gaggtgttcaaacagcctgtggagagcagacagctgctgctcagacaaggtcggtctgca
gagcctcaagacaagtctgaacagtctcgacctccacactcccacagcccagctcctgac
gcacagcccaaagctgcaggcaccaagaagaagaagccacagagtgagaagaaacctgca
gacattcctccaaatgtaacatctgctgaacagaggagtcacctcctgaagtatggaact
gtgttgacctttgacccaaaaacggtccacaaacgcatcacactgactgagcagtttacc
aaagctaccgtgtcagaggagatggcaaactaccccaactacattcagcgcttcactgtc
tgctctcaggtgcttgcctcaaaggctttctctaaagggcgccactactgggaaatccgg
ctgagctgcaacaacttcattggcctaggtctggctcttggcagcattgatcgtaaaggg
cccaacagtcgcctgggccgcaacgcccagtcctggtgtgtggagtggttcaatgtgaaa
ctgtcagcctggcacaacagcatggaggtggtcctgcaaaaccccagcccgaagcgcgta
ggtgtgctgctggactgtgatgctggaaaggccaccttctataaggtggctgagatggcg
tatccattcttcacctttgacattcccatcaccgaggcagtgtacccagccttctggctt
ttctcaagtagttcctccctctctctgtgcaagctgcagcaatga
DBGET
integrated database retrieval system