KEGG   Cynoglossus semilaevis (tongue sole): 103384450
Entry
103384450         CDS       T04866                                 
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem03030  DNA replication
csem03410  Base excision repair
csem03420  Nucleotide excision repair
csem03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csem00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103384450 (rfc2)
   03410 Base excision repair
    103384450 (rfc2)
   03420 Nucleotide excision repair
    103384450 (rfc2)
   03430 Mismatch repair
    103384450 (rfc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csem03032]
    103384450 (rfc2)
   03036 Chromosome and associated proteins [BR:csem03036]
    103384450 (rfc2)
   03400 DNA repair and recombination proteins [BR:csem03400]
    103384450 (rfc2)
DNA replication proteins [BR:csem03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    103384450 (rfc2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    103384450 (rfc2)
Chromosome and associated proteins [BR:csem03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    103384450 (rfc2)
DNA repair and recombination proteins [BR:csem03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     103384450 (rfc2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    103384450 (rfc2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 nSTAND_NTPase5 AAA_lid_RFC1 AAA_22 AAA_14 RCF1-5-like_lid AAA_16 Viral_helicase1 Mg_chelatase AAA_11 Rad17 RuvB_N AAA_5 DEAD MipZ AAA_19 nSTAND3 AAA_assoc_2 AAA_24 AAA_18 AAA_28 MeaB ABC_tran AAA_30 RNA_helicase DNAX_ATPase_lid AAA_25 NTPase_1 SLFN-g3_helicase AAA_23 AAA_2 MCM FtsK_SpoIIIE AMP-binding_C_3
Other DBs
NCBI-GeneID: 103384450
NCBI-ProteinID: XP_008316194
LinkDB
Position
10:complement(1448285..1450794)
AA seq 359 aa
MDVDMAEAESTQKPLRSGVKESAEVSDAPSTSSGGSASYEVPWVEKYRPLKLDEIVGNEE
TVRRLEVFSREGNVPNIIIAGPPGTGKTTSILCLARALLGASMKEAVLELNASNDRGIDV
VRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASD
KIIEPIQSRCAVLRYSKLTDGQILARLQDVVERERLSVSDDGLEAVIFTAQGDMRQALNN
LQSTHAGFGYISSENVFKVCDEPHPLMVKSMLGHCVEGNIDQAYKVVEQLWALGYSPEDI
IGNIFRVCKTYNMAEYLKLEFIKEIGYTHMRVAEGVNSLLQMAGLVARLCNKTLAPPAS
NT seq 1080 nt   +upstreamnt  +downstreamnt
atggacgtggatatggcggaggctgagagtactcagaagccactacggagtggagtgaag
gagagcgcagaagtctcggatgctccgtctacgagctcgggaggttctgcatcctacgaa
gttccgtgggtggagaaataccggcccctgaaactggacgagatcgtgggcaacgaggag
actgtgcgccgcttggaggttttctccagagagggaaacgtgccaaacatcattattgca
ggtcctccaggcacaggaaaaaccaccagcattctgtgtttagctcgagcattgttggga
gcgtctatgaaggaggctgtactggagctgaatgcttccaacgacaggggtatagatgtg
gtgaggaacaaaatcaagatgtttgcacaacagaaagtcacgttgcccaaaggacgacat
aaaatcatcatcctggatgaggctgacagtatgaccgatggtgctcagcaggcgctgagg
aggatcatggagatctactcgaagacgactcgttttgctcttgcatgcaacgcctctgac
aaaatcatcgagccaatacagtctcgctgcgctgtgctgcgttactccaaactgacggac
ggacagatcctggcacggctgcaggatgtggtggaaagggagcgtttgtccgtgtccgat
gatggcctggaggcagtcattttcactgcacagggagacatgagacaggcgttgaacaac
ttacagtccacgcacgccggctttggttacatcagtagtgaaaacgtgttcaaggtgtgt
gatgagcctcacccgctgatggttaaaagcatgctgggacactgcgtggagggaaacatc
gaccaggcgtataaagtggtggagcagctgtgggcactgggctattctcctgaggacatc
atcggaaacatcttcagggtctgtaagacctacaacatggcggagtatctcaaactggaa
ttcataaaggagatcggctacactcatatgcgagtggccgaaggagtcaactctctgctg
cagatggctggactggtggctcggctttgcaacaagacgttggcgccccctgccagctga

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