KEGG   Cynoglossus semilaevis (tongue sole): 103384748
Entry
103384748         CDS       T04866                                 
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
  KO
K10652  tripartite motif-containing protein 25 [EC:2.3.2.27]
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:csem00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    103384748
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csem04121]
    103384748
Enzymes [BR:csem01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103384748
Ubiquitin system [BR:csem04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    103384748
SSDB
Motif
Pfam: PRY SPRY zf-RING_UBOX zf-C3HC4_4 zf-C3HC4 zf-B_box ANCHR-like_BBOX RING_XB3-XBAT31 zf-RING_2 zf-C3HC4_3 zf-C3HC4_2 zf-RING_5 zf-RING_10 U-box DUF733 Prok-RING_4 RIP
Other DBs
NCBI-GeneID: 103384748
NCBI-ProteinID: XP_008316618
UniProt: A0A3P8UTE4
LinkDB
Position
10:5920875..5928884
AA seq 547 aa
MSLWKPEEQLALELSCSICLQLYSDPVVLPCGHNYCRSCIFKTTDTADKTGKILPRCPDC
REEFKGVDSLQRNFKLCNIIEGYQAAILLFRRQSDTKPVKMEVFCDHCIDDESPAVKTCL
KCEVSLCSRHLHKHQEKESFKVHPLVEPVVDLGMMSCSVHQRPLEYFCSNDMTSLCGTCF
LEGQHQNHDVLTYSVAEEEMRRALECRTKVVSCKLHITESLLQKTAEEQGASEDIGDKLI
NKAVSLVDNMAALVDRFRERLYVLLEEEKGQRRKSWQLGVSALEEHQQQLMDAQRSANEA
LYETDTRMFIHRFMLIEEALRKVVESNVPSNVPSKAPLNTRRLQTGLKTQDFRGEMIRLL
ESLNIVLDPLDLTFNVITAHPTLIMSNDLRTVKYSPSKQPYPEHPERFTSAPQVLCSQGF
SSGEHVWVVEVGPNCMWSIGVCYKNIPRRGDHSRLGHNSVSWRLQWKNGKLTVCQCSCNV
VLGEVAHQPLRIEVALDYERGTLSFHSIKGRREHLHTFRVVFREMVYPAFSIHSNTPESW
ITLHNGL
NT seq 1644 nt   +upstreamnt  +downstreamnt
atgtctttgtggaaaccagaggagcagcttgccttggagctgagctgctccatctgcctc
cagctctactctgacccggtggttctcccctgtggacacaactactgtcgatcctgcata
ttcaagacgacagacactgctgataaaactggtaaaattcttccgcgttgcccagattgt
cgtgaggagtttaagggtgtggacagcctacagagaaacttcaaactctgcaacatcatc
gaaggctaccaggctgccatactgctcttcagaagacagagtgacacgaagcctgtaaag
atggaggttttctgtgaccactgcattgacgatgagtctccagccgtgaagacctgcctg
aagtgtgaagtgtctctgtgctccaggcacttacacaaacaccaggagaaggagtcgttt
aaggtgcacccgctggtggagcccgtggtcgatttgggaatgatgagctgctctgtccac
cagcgtccactcgagtacttttgctccaatgacatgacctcactgtgtggcacctgcttc
cttgaggggcaacaccagaaccatgatgttctcacctacagtgtggcagaagaagagatg
agacgagcactggagtgtcgcaccaaggtggtttcctgcaagctccacatcactgagagc
ctcctgcagaagacggctgaggagcagggagcctcggaggacataggtgacaaactgatc
aacaaggcagtctcactggtggacaacatggctgcactggtggacaggttcagggagcgt
ctgtatgtgctcctggaggaggagaaaggtcagcgccgaaaaagctggcagctcggcgtg
agtgcactggaagaacaccagcagcagttgatggatgcccagagaagtgccaacgaggcc
ctctatgagacggacacccgcatgttcatacacaggttcatgctaatcgaagaagcactc
agaaaggttgtcgagagtaacgtgccttcaaatgtcccctcaaaagcaccactcaacacc
aggcgcctccagacaggcctcaaaacccaagacttccgtggagaaatgattcgcctcttg
gagtccctcaacattgttctggaccccctggacctcacctttaatgtcatcactgcacac
ccaaccctgatcatgtccaatgaccttcgcactgtcaagtacagccccagcaagcagccg
taccctgagcaccctgagcgttttacaagtgcacctcaggttctctgcagccagggtttc
tcaagtggcgagcatgtgtgggtggtagaggtggggcccaactgcatgtggtcaattggg
gtgtgttacaaaaacatccctcgtcgtggtgaccacagtcgcctgggacacaactcagtg
tcctggcggctgcagtggaaaaatggcaaactgacagtgtgccagtgctcctgtaatgta
gttctgggtgaagttgcccaccagcccctgaggattgaggtggcactggactatgagagg
ggaacactttcattccatagcatcaaagggcgcagagagcaccttcatacctttagggtt
gtgtttagggagatggtttatccagcgttcagtattcactccaacaccccggagtcctgg
atcacactgcataatgggttgtaa

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