Cynoglossus semilaevis (tongue sole): 103384959
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Entry
103384959 CDS
T04866
Symbol
exosc10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103384959 (exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103384959 (exosc10)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
103384959 (exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
103384959
NCBI-ProteinID:
XP_008316902
UniProt:
A0A3P8V1B7
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Position
10:complement(10235067..10242427)
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AA seq
896 aa
AA seq
DB search
MYTATAEKMTDTFNKKDSTNSGLKNKSSNANDEEKDELCPGFKDVDAFVKYGLGAVLSAT
KASAGLPQAGDEFDFYRSFPGFQDFCEGQGDKLLHCMSQIMKHHGCRSHTRDQNKLTGLE
ERYDLVVDSNDVILERAGILLDEADGVNRSQQPVMPAGFQPPKIVVSSWNRKGSGSGSRS
ETFRLMHAKNITRPQLKFKEKIDNSNTPFVPKIFTKPHAMKPLPSYFTSQQNRKDDQSVP
SALADLIHQQRTQQHVEDMFAHPYQYELDHLMIPESLLSKPEPQMYKPLAETTCSFIDTL
EDLVALNEKLCTSSEFAVDLEHHSYRSFLGLTCLMQISTREEDFIIDTLELRSELYILNE
AFTDPSIVKVFHGADSDMEWLQRDFGLYVVKLFDTHQASRALNLARHSLDHLLKHFCSVD
SDKRFQLADWRIRPLPEEMIQYARSDTHYLLYIYDCMRAQLLDFNYGQPGLLQSVWNRSR
DISLKKYMKPIFTDESYLELQRKQKKSFNTQQLTAFRLLFAWRDKLARQEDESTGYVLPT
HMMIKISEELPKEPQGIIACCNPVPPVVRQQINELHLLVQQAREVPLLKAELAAQKQKGL
TPIKKPEVTLFGPHDTSRVSESDLPPFTPQELPLKQGVLFSEDEDRKDSDEKISGLVAHA
KITLFEELETKTDEESLPVAHMKARRINESFENPFRMYLPTTDVHINKNAKFDPSSKIFE
ISKRWKLQSIEQQQAELEAKRKAKTAAKQQAKKATEESNKAKQSYQESLQNVATVRQLAA
DSKGGGKKREREQSETGESTPKPSKKLMKSSEKPQKDKPSPQESFTPFDYSQSDLKVFTE
VKTKDNTHFDPNRQAHSTKRQKTPKGQKSNFGAATRSMSYLTGKSDRGFRHNWPKR
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgtacacagcaacagcagagaagatgacggacacttttaataagaaagactccacaaac
agcggtcttaagaacaaaagttcaaacgcaaacgacgaggagaaagacgagctctgtcct
ggttttaaagacgttgacgcatttgtcaagtatggactgggggctgtattatcagccacc
aaagcctcagccggcctgcctcaagctggagatgagttcgatttctaccgcagcttccca
ggcttccaggatttctgtgaaggccaaggagataaactcctgcattgcatgagtcagatc
atgaagcatcatggctgcagatctcacacaagggaccagaacaagttgacagggctggag
gagagatacgacctggtggtggactccaatgatgtcatccttgaaagagcaggaattctt
cttgatgaagccgatggtgtaaacaggagccagcagcctgtcatgccagcaggctttcag
cctccaaagatagtcgtttccagctggaatcgcaagggttcaggctctggcagccgttca
gagaccttcaggctcatgcacgccaagaacatcaccagacctcagctgaaattcaaggag
aagattgacaacagcaacacgccatttgtccccaagatctttaccaaaccccatgcaatg
aagccactcccatcttattttaccagccaacaaaatcgtaaagatgatcagagtgtccca
tctgctctggctgacctcattcatcagcagcggactcagcaacatgttgaggacatgttt
gcacacccgtaccaatatgaactggatcacctcatgataccagaaagccttttgtccaaa
ccagaacctcagatgtacaaacctttggctgagaccacatgctccttcatcgacaccctg
gaggatctggtggctctaaatgagaaactgtgtacctcgtctgaatttgcagttgatctt
gagcatcactcctacaggagtttccttggcctcacctgtctgatgcagatctccaccagg
gaggaggatttcatcatcgacactttggagctccgcagtgagctgtacatcctgaacgaa
gctttcaccgatccctccattgtcaaggtgtttcacggtgctgactctgacatggagtgg
ctccagagagactttggcttgtatgtggtcaaactttttgacacacatcaggccagcaga
gctttaaacctagccaggcattctctggaccacctgctcaaacacttctgcagcgtggac
tcagacaagcgcttccagctggctgactggaggatacggccactgccagaggaaatgatc
cagtatgcacgcagtgacactcattacctcctctacatctacgactgcatgagggcacag
ctcctggactttaactatgggcagcctggactgctgcagagcgtctggaacaggagcaga
gacatttccctgaagaaatatatgaagcccatattcacagacgagtcctatctggagctg
cagaggaagcagaagaagtctttcaacacccagcagctcactgccttcaggctgctcttt
gcctggagggacaagctggccagacaggaggatgaaagcacaggatacgttctgcccacg
cacatgatgatcaagatatcagaggagctgcccaaggagcctcagggcatcattgcctgc
tgtaaccccgtgcccccagtggtgaggcagcagatcaatgaactccatttgttggtgcag
caagcaagagaagttcctctcctaaaggctgaactggcagcacaaaaacagaagggactc
acacctattaaaaagcctgaggtcacgttgttcggtcctcatgacacatctagggtctct
gagagtgacctcccaccttttactccacaagaactgcctttgaaacaaggagtgctgttc
tcagaagatgaagacaggaaggattcagatgagaagatcagtggactggtggcccatgcc
aaaatcacactttttgaggagctggaaacaaagactgacgaagagtctcttcctgttgct
cacatgaaagccagacgcatcaatgagtcttttgaaaaccctttcagaatgtatttgcct
accactgatgtgcacatcaacaagaacgccaagtttgacccatcctcaaaaatattcgag
atcagtaaacgatggaagctgcagagcattgaacagcagcaggcggagctggaggccaag
agaaaagccaaaacagcagcgaagcaacaggcaaagaaagccacagaggaatcaaacaag
gctaaacagagctaccaggagtctctccagaatgttgccactgtgcgccaacttgctgcg
gattcaaaaggcggaggaaagaaaagagagagggaacagagtgagactggagagtcgact
cccaaaccaagtaaaaaactgatgaagtccagtgagaagccccagaaagacaagccatct
cctcaagagtccttcacaccctttgactacagtcagtcagacctaaaggtttttacagag
gtcaaaacaaaagacaacacacatttcgacccgaatcgccaagcccacagcacaaagaga
cagaaaacacccaaaggacaaaaatctaactttggtgcggcaacccgaagtatgtcatac
cttactggaaaatctgacagaggattccgtcataattggccaaaaagatag
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