Cynoglossus semilaevis (tongue sole): 103385036
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Entry
103385036 CDS
T04866
Symbol
ube4b
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04120
Ubiquitin mediated proteolysis
csem04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103385036 (ube4b)
04120 Ubiquitin mediated proteolysis
103385036 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csem04121
]
103385036 (ube4b)
Enzymes [BR:
csem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103385036 (ube4b)
Ubiquitin system [BR:
csem04121
]
Ubiquitin ligases (E3)
U-box type E3
103385036 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
103385036
NCBI-ProteinID:
XP_016891658
LinkDB
All DBs
Position
10:complement(11771612..11785871)
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AA seq
1188 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPCTPLSTPLTSPQRENPPGPLLGPSAATPQPLPPAA
SQSLGLNVHSGTPATSPMGTSGVAYGSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
TASCEKSMSQVDVDSGIENMEVEDSDRREKRNLSEKETSANSDVSEEQALQLICKILRVS
WKDLDRDVIFLPSLAAEFHHNPKDAYSDFKDLIGQILMEVLMMSSQSRIHNPFASLTATS
QPIAAAKSPDHRLTLVQPSSLGGSPMGPGAGSFGASSLSSLGACGGVMPSDSACDRFTIE
TCKETEMLNYLIERFDSVGMEERKAPKMCSQPNVSQLLSNIRSQCISHVALVLQGALTQP
RSPLHQSLLVPYMLCRNLPYGFIQELVRITHQEEEVFRQIFIPILHGLGLAVKECSFDSD
NFKFPLMALAELCEIKFGKAHPVCNLMISLPLWCPKPLSPGSGREIQRLSYLGAFFSLSV
YAEDDSKVGDKYFSGPAITMENTRVVSQSLQHYLELARGDLFKILHNILLHGEPRGETRD
LALNYMAALVNYNVKKAQMQTDDKLVSTDGFMLNFLRVLQQLSMKIKLETVDPYYIFHPR
CRLAVSVEETRLKATMEELKSWLSELHEDPSKFSEPKFPTECFFLTLHTHHLSILPCCRR
YIRRLRAIRELNRTVEELKNSEGQWKDSPLASRHREMLKRCKTQLKKLVRAKACADVGLL
DENLLRRCLQFYSTVIQLLLRMVDPAYPNITLPLNPEIPKSFAALPEFYIEDVAEFLLFV
VQYSPQVLYEPCVQDIVTFLVVFICSQNYIRNPYLIAKLVEVLFVTNPAVQLRTQQFSEM
MENHPLSIKQLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFLE
EFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWEQLPRDQQQSRQSQ
LTQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRD
LKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMRKAGI
KSSIAIEKFKLLLEKVEEIVARNSQSEMDYSDAPDEFKDPLMDTLMTDPVLLPSGKIMDR
SIILRHLLNSNTDPFNRQPLTESMLEPVPELKERIQAWMREKQGGRLV
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggaggaactaagcgccgacgagattcgcagaaggcgtcttgcacgactggcaggtgga
cagacgtcacagccctgcacccctctcagcacgcccctgacctccccacagagagaaaac
ccacctggacccctccttggaccctcagctgccacaccccagcccctgccaccagctgcc
tcccagtcactggggctgaatgtccacagtggaaccccagccacatcccccatgggcacc
tctggagtggcctatggtagtcagagcagtgagggtgtcagctccctctccagctccccc
tccaacagccttgagactcagtcccagagtttgtcccgatctcagagcatggacatcgac
actgcctcctgtgaaaagagcatgtcccaggtggatgtggactcagggatagagaacatg
gaggtggaagacagtgaccgcagggaaaaaaggaatttgagtgaaaaggaaacgtctgca
aactcagacgtctctgaagagcaggctctgcagctcatttgtaaaatcctccgcgtatcg
tggaaggatctggatagagatgtcatctttctgccttcactggctgctgagttccaccat
aatcctaaagacgcgtactctgattttaaggaccttattggccagatcctgatggaagtt
ttaatgatgtcctcccagtcacggatccacaacccttttgccagcttgaccgccacctct
cagccaattgcagccgccaaatcccctgaccaccgtctgacactggtgcagccctccagt
cttggtggaagtcccatgggccccggtgcagggtcttttggtgccagctctctgtccagt
cttggtgcatgtggaggggtgatgcccagcgactcagcctgcgaccgcttcaccattgaa
acatgcaaagaaacggagatgctgaactacctcatagagcgttttgacagtgttggtatg
gaggagaggaaagctcccaagatgtgcagccaacctaatgtcagccagctcctcagcaac
attcgatctcagtgcatttctcatgtcgccctggtcttacaaggcgccctaacccagcct
cgaagtccgctccatcagtcgctgctggttccttatatgctgtgtcggaaccttccttac
ggttttattcaggagcttgttcgaattacccaccaggaggaggaggtctttagacagatc
tttattcctatcctccacggtctgggtcttgcagttaaagaatgttctttcgacagtgac
aactttaaattccccctcatggctctagctgaactttgtgaaattaaatttggaaaagct
catccagtgtgtaatttgatgatatcactgcctctctggtgtcctaaacctctcagccct
gggtctggcagggagatacagagactgtcctacctgggagccttcttcagcctctctgtt
tatgctgaagatgatagtaaagtgggagacaagtatttctctggccctgccatcactatg
gagaacacccgagttgtcagtcagtcgttgcagcactacctggaattggcgaggggtgac
ctgtttaaaattctccacaatatcctgctgcatggagagccgcgaggcgagacgcgagac
ttggctcttaattacatggcagctttagtcaactacaatgtgaagaaagctcagatgcag
acggatgacaaactggtgtccacagacggcttcatgctgaacttcttacgggtgctgcag
cagctgagcatgaagatcaagctggagactgtggacccttattacattttccacccacgc
tgtcgccttgctgtcagcgttgaggagacacgtttgaaggcaacgatggaggagctgaag
agctggctatctgaactacatgaagatccgtccaagttctcagaacccaagttcccaaca
gagtgtttcttcttgacgttacacacacaccatttgtccattctgccttgctgcaggcgc
tacatccgtaggttgcgagccatccgtgaacttaacaggactgtagaggagctgaagaac
agtgaaggccaatggaaggattctcctctggccagtagacatagagagatgctgaaacgt
tgcaaaacccagctcaagaaactcgtgcgagccaaagcttgtgctgacgtcggccttctg
gatgagaacctgctccgcagatgtctgcagttctacagcacggtcatccagctcctcctc
cgcatggtggatccggcctacccaaacattaccctgccactaaaccctgagattcccaaa
agctttgctgctcttccggagttttacattgaagatgtggctgagtttctgctttttgtt
gtgcagtattctccccaggttttatatgagccatgtgtgcaggacattgtcaccttcttg
gtggtgttcatctgcagccagaattacatcaggaacccctatcttatagccaagttggtg
gaggtgctgtttgtcacaaaccctgctgtgcagttacgtactcagcaattttctgaaatg
atggagaaccacccgttgtctatcaaacagctggtccctgcccttatgaagttctacaca
gatgttgagcacactggagccaccagcgagttctatgataaattcactatacgatatcat
atcagcaccatcttcaaaagcctgtggcagaacattgcccaccatggaacattcttggag
gaatttaactctggcaaacagtttgttcgctacatcaacatgctgataaatgacaccacc
ttcttgttagacgagagtctggagtcactaaagcgaattcatgaagttcaagaggagatg
aaaaataaggagcagtgggagcagttacccagggatcagcagcagagccgacagtcccag
ctcacccaggacgagcgggtgtctcgctcctatctggccttggccacagagacagtagat
atgttccacatcctcaccaagcaggtccagaagcctttcctcaggcctgagttggggcct
cgtttagcagcaatgctgaactttaacctccagcaactgtgtggacccaagtgccgtgac
ctgaaggtggaaaacccagagaagtacggctttgagcccaagaagcttttagatcagctg
acggacatctacctgcagctggactgtgctcgctttgctaaagcaattgcagatgaccag
aggtcgtacagccgcgagctcttcgaagaggtgatctccaagatgagaaaagctggaatt
aaatcctccatcgcaattgaaaaattcaagttgcttttggagaaagtcgaagaaatagtt
gccagaaactctcaatccgaaatggactacagtgatgcacctgacgagttcaaagaccca
ctgatggacacactgatgactgaccctgtgttgctgccttccgggaaaatcatggaccga
tccatcatcctccgccacctgctcaactctaacactgatcccttcaacagacagccactc
acagagagcatgttggagccagttcctgagctgaaggaaaggatccaagcctggatgaga
gagaagcagggtggacgacttgtctaa
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integrated database retrieval system
