Cynoglossus semilaevis (tongue sole): 103385421
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Entry
103385421 CDS
T04866
Symbol
frem1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103385421 (frem1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
csem04091
]
103385421 (frem1)
Lectins [BR:
csem04091
]
C-Type lectins
Lecticans
103385421 (frem1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Big_9
Calx-beta
Motif
Other DBs
NCBI-GeneID:
103385421
NCBI-ProteinID:
XP_016886712
LinkDB
All DBs
Position
1:complement(21556826..21596634)
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AA seq
1985 aa
AA seq
DB search
MLAPQHLTWILLPVLLLGLTCSVHGSLVKVNKGLRVKRGQSAYLDEGDLQFHIPHQKDAC
KVEVVLNEPITQRVGKLLPQVFDCHYLADEVKYVHNGCPLLREDTVLLRLYRFTETETYV
EVFSLHVEVTEPDCSVIRLGPKSLEVPEFYSLSDVIDGNVVSFRYDRRSNLECSIHLINH
DTHLPAHGQLVTGEPEKATKRGDEPESFIHLRQQLDNKDRALCKSEVCLKGLKLVKFTKI
SCDDFLLMGLRYQHIDPPSPDIDYITLRLDLKDTRSGSVYKSEQAWIPVRIFGAMPNQPP
KLALMSMLILEVDQFILTPLSTATLDAEDEETPKQLLVFNITKPPEEGFITHLSDHTRQI
SSFTWLDLNDMLIGYQPPNSSHTLRRNYEVEFEVHDFFFERSPAVTVHVSVRNADTNAPR
VSWNMGLSLLEGQSRLITWEQIQIVDNDNLNAVRIITVDGLQHGRLTVRDRKGFMFTVHD
IKRGEVRYHHDDSDSIKDFIVFRITDGRHQTRHKFPIKILPKDDSPPFLITNMLLEVSEG
QTALLRGSTLQASDMDSSNDYILFNITRPPQAGELMKIPGPGLVGYPVGRFLQKDLSLSL
IYYRHLGNEVFDDSFEVVLSDFHDPPNLSEPQVVLVHIEPVPDQPPKEVPGSSRYIVVKE
TEVVHITRQQLHFVDQESPDSELTYTVTTPPFNVGPHSSPDAGRLFLVDSIPKFTKDSNA
PVLRLFTQHAVNYMKVAYMPPIPDIGPHPQYIQFVLSVTNALGKTITGICFNVTVTPEDN
QPPQIVASALTVDEGGEARLDPRILLLSDVDSMEEALQVKLKKTPQHGALQLGGSVVKPG
QAFTVHDLRSYSVSYKHDDSETLVDDIEFTATDGTNSVDFVLQVKVTPINDEVPVLVAGL
KPDLRCEEGKETVITAEYIFASDADSDNSSLSFMIARQPYHGVVLRRGVVVDRFIQADIS
AGIVTYKHTGLEIGLTPRHDTITFVISDGETETTALCCSGGNPPGGRSRVQIRDSLPVYD
LHITVFPVDNQAPSLTTGDIFTVDEGGTAAITASHLKASDADTVLDELVVSLISPPQVGY
IENVLPSPGFEKSNMGISIASFSYKDVLDGHVNYVQSRHQRVEPTADQFMLCVSDGKHVS
AHVPFFVIIKPVNDEIPQFIARNITVREGDMTPLDSSVLNALDLDLPRDVLRFSIVKPPR
HGSIVSHGSEGLVNKRREAGLPSTVVDFTMSSLVNGDEPMYAHDDSENMEDSFTVQLTDG
QNQLHRQVMVKVLPVNDQEPRITRNNGLEVEPGESRLISSVTLLAQDADTPSSEVKYIFE
SVPTQGLLQLKEGQHWVTLTSGNHSTQEMLDMNLLRYVHTGIHTSETQDFFVFHLMDGNN
RSPSQHFHISVKELKKGNIAVIVKPLNVSQGDRVVLTTDVLLATDGAEMPEELLYVVTVP
PSQGHLEYIKHPGLAISSFSQMDIAANLVVYVHDNRASTPKEKFQFVVSNGKTSRNGSFE
MTVEMVDRVLPSLSSNKGVTVPQGSSIILGSDCLALSDPDTPPTALIFTLSQPPQYGRLL
LRGGRLTAGANFTYRDIQEMEVSYKHDGGPSQIDRFAFTASDSTFRGFLLDGRSQLEPVF
FTIQIKPLDKSPPKIVKLLPLSKAELLDDGRYGIFLSSLLLKAEDSDSRDEEIIFCIVRP
PYFGYLENITTGSFVHRRFSQMELSKKNVVYIITPEKDSLSDSLEFTVSDPLGNTGTSHV
LEFSWSNVELSQTEWSVCEEQGSVLLDISRKGNLADSAYVTITVKPVTAVAGIDFLISPS
SLIQFDPGMSKRSWQIEIIQDHLEEAEETFEVLLISPESTVIGATNKAKVTIRDSGKNCC
FSRPASVPKKKIRVTGNPRSIAPSSVFHNGTDVVYTYHGIMQMKVEDETTPSRKGRRANV
RVSSGGTLQQAFAVPFKSKQNLQRKTGKSKEMRPMQGDHHSGFTYMFLHMGDFGAQNHSP
AMAGI
NT seq
5958 nt
NT seq
+upstream
nt +downstream
nt
atgttggccccacaacatctgacctggatcttgctcccggtgctccttctgggactgaca
tgctctgtgcacggttccctggtgaaagtcaacaaaggtctgagggtcaaaaggggtcag
tcggcctaccttgatgagggtgacctgcagttccacatccctcatcagaaggatgcgtgc
aaggtggaggtggtgttaaatgagcccataactcagcgagtgggaaagctactgcctcag
gtgttcgactgccattatctggctgatgaggtgaagtacgtccacaatggttgtccatta
ttaagagaagacactgtcttgctacgactctacaggttcacagaaactgagacatacgtg
gaggtgttctcgctgcacgtggaagtcacagaacccgactgtagcgtcataagactggga
ccaaaatccttggaggttcctgaattctacagcctctctgatgtcatcgacggcaacgtg
gtgtccttccgctacgacaggaggtccaacctggagtgtagcatccatctcatcaaccac
gacacacacctgccagcccatggccaactggtcacgggtgagccagagaaagccaccaag
agaggggacgagccggagagttttatccacttacgtcagcaattagataataaggacaga
gctttgtgcaaatctgaggtctgcctgaaggggctaaagctggtgaagttcaccaaaatc
tcctgtgatgacttcttattgatgggactgaggtatcagcacatcgatcctccatcgccg
gacatagactacatcacattaagactggacctgaaggacaccaggagtggcagcgtttac
aagtctgaacaggcatggattccagtgcggatttttggtgcgatgcccaaccagcctcct
aaactagccttaatgtccatgttaatcctggaggtggaccagttcatcctcactcctctc
tccactgccaccctggatgcagaggatgaggagactcccaaacagcttttggttttcaac
atcaccaaaccaccagaggaaggcttcatcactcacctctccgatcacactcgccaaatc
tcctccttcacatggttggatctcaacgacatgctcatcgggtaccaaccacccaactct
tcacatacgctacgcaggaattacgaggtggagtttgaggtgcatgattttttcttcgaa
aggagcccagcggttacagttcacgtgtccgtccgaaatgcagacacaaatgcaccgaga
gtttcctggaatatgggtcttagccttctggaaggtcagtcccggctgataacatgggag
cagatccagattgtggacaatgacaatttgaatgcggtccgtattatcacagtggatggc
ctgcagcatgggcggctcactgtcagagatagaaaaggcttcatgttcaccgtccacgat
atcaaaaggggcgaggtccgatatcaccacgatgacagtgactccatcaaagacttcatc
gtcttccgaatcaccgacggtcgccatcagacgcgacacaaattcccaatcaagatactg
cccaaggatgacagcccacctttcctcatcaccaacatgctgctggaagtgtctgaaggc
caaacggccctgctgaggggctccaccctgcaggcatctgatatggactctagcaacgac
tacattcttttcaacatcacacgccctccacaagcaggagagctcatgaaaatcccagga
ccaggacttgtaggttaccccgtgggccgctttcttcagaaggacctgtcgctctctttg
atttactaccgacatcttggaaatgaagtgtttgatgattcctttgaggtggtgctgtcg
gacttccatgaccctcccaacctgtcggagcctcaggtggtgttggttcacatagagcct
gttcccgaccagcctcccaaagaggttcccggctccagccgctatatcgtggtcaaagaa
acagaggtagtgcacatcacacgacagcagctccactttgtggaccaggagtcacctgac
agtgagctgacctacaccgtaaccacgccgcctttcaacgtcggtccgcacagctctcct
gatgcgggcaggctgttcctggtggacagcattccgaaattcaccaaggactcgaacgca
ccagtactgaggctattcacacagcacgcagtgaactacatgaaagtagcctacatgcct
ccgatcccagacatcggccctcaccctcagtatatccagtttgttctctccgttaccaac
gctctaggcaaaaccatcactgggatctgctttaacgtcaccgtaacaccagaagacaac
cagcctccacagatagttgccagtgctctgactgtagatgagggaggagaggccaggctt
gacccacggattttgcttctgtcagacgtggactctatggaggaagccctgcaggtcaag
ctcaagaagacacctcagcatggagctcttcagctggggggctccgtcgtaaaaccaggc
caggctttcactgtgcacgacctgagaagctacagtgttagctacaaacatgacgactca
gagacgctagtggatgacattgagttcacggcaacagacggcactaattcagtggatttt
gtcctgcaagtgaaggtaacgcctatcaacgacgaagtcccagtgctggtcgctggtttg
aaaccggaccttagatgcgaggagggaaaggagacggtcatcacagccgagtacatcttt
gcgtcagacgcggacagtgacaacagcagcctgagcttcatgatcgcaaggcagccgtac
cacggagtggtgctccgtcggggtgtggtggtcgaccgcttcattcaggcagacatcagt
gctgggatcgtcacctacaaacacacaggacttgagattggactcactccccgccatgac
accatcacctttgtcatctcggatggagagacagaaaccacggctctgtgctgcagtgga
ggaaacccccctggtggtagaagccgagtgcaaataagggacagtctgccagtttatgac
ctccacatcacagtgtttcctgtcgataaccaggcaccttcactaacaacaggagacatc
tttacagtggatgagggcggaactgcagccattactgcatctcatctaaaggcctctgat
gcagacactgtcctagatgaactggtcgtcagtctgatttctccaccccaggttggctac
attgaaaatgtcctgcctagtccaggctttgagaaaagcaacatgggcatcagcatagct
tctttttcatacaaagacgtccttgacggacatgtgaactacgttcagtccagacaccag
cgagtggagcccactgccgaccagttcatgctgtgcgtctcggatggcaagcacgtctcg
gcccatgttcccttctttgttataatcaagccagtgaatgatgagatcccccagttcata
gcccgcaacatcacagtccgtgaaggagacatgactccactggactcatctgtgttgaat
gcgttggacttggaccttcccagagacgtactgcgcttcagcatcgttaaacctcctcga
catggcagcattgtcagccatggcagcgaagggctggtcaacaaaagacgagaagccggt
ctgccgtctactgtggttgatttcacaatgagcagtttagttaatggtgatgagccaatg
tatgcgcacgacgactctgaaaatatggaggacagtttcaccgtccagttaacagatggt
cagaaccagcttcaccgacaagtgatggttaaagtgctgccagtcaatgaccaggagcct
cgtatcacaagaaataatggtctggaagtggagcccggagagagcaggctgatatccagt
gttacgctgttagcacaggacgctgatactccctcctcagaggtcaaatacatatttgag
agtgttcctacacagggattacttcaacttaaggaaggccagcactgggtgacgctaaca
tctgggaaccacagcacccaagaaatgctggacatgaacctcctccgctatgtgcacacc
ggcatacacacctctgagacgcaggacttctttgtcttccacttgatggatgggaacaac
cgatcgccctcacaacactttcacatctctgtcaaagagcttaagaaaggaaacatcgct
gtcattgtaaagccgttgaacgtcagccaaggtgaccgtgtggttctcacgacggacgtg
cttctagccacagatggcgctgaaatgccagaggagctgctctacgtcgttactgtccct
ccgagtcagggacatttagaatacataaaacatccaggactggctatctcctccttcagt
cagatggacatagcagcaaacctggtagtgtatgtgcacgacaacagagctagtacaccc
aaagaaaaatttcagtttgtggtgagcaatgggaaaacgagccgaaatggaagtttcgaa
atgaccgtggaaatggtggatcgcgtccttccatctctttcctccaacaagggcgttaca
gttccacagggatcttctattatcctgggttctgattgcctagccttgtcagaccccgac
accccacccactgctctgattttcaccctctctcagcctcctcagtacggtaggctgctt
ttaaggggtggtcgcttaactgctggagcaaatttcacctacagggacatacaggagatg
gaggtgtcatataaacatgacggagggccgtcacagatcgaccgatttgcttttacagcc
tctgacagcacctttcgtggcttccttctggatggacgctcacagctagaacctgtgttc
tttaccattcagattaagccactggataagtcacctccgaagattgtgaagctacttcct
ctttctaaggcagagctcttagacgacggacgatatggaatctttctgtcctctctcctt
ctaaaggctgaagacagtgacagcagagatgaagaaatcatattctgcattgttcgtccg
ccctacttcggttacctggaaaacatcactacaggcagttttgtgcatcgccgtttctct
caaatggagctgagcaagaaaaacgttgtttacatcatcactccagagaaggactcactt
tcagacagcctagagttcaccgtgtctgatcctttgggaaacacgggaacctctcatgtc
cttgaattcagctggtcaaatgtggagctctcacagaccgagtggtctgtatgtgaggaa
caaggaagcgtcctgttggatatctcacgaaaggggaacctggcagactcagcatacgtc
accatcacggtaaagccagtgactgcagttgcgggtatagatttccttataagcccatct
tccctcatccagtttgatccaggaatgtcaaagaggagctggcaaatagaaatcattcag
gatcaccttgaggaagcggaggaaacgtttgaagtgctgctgatctctcctgagagcacc
gtaatcggtgccacaaacaaagctaaagtgactattagggattcaggaaaaaactgttgt
ttttccagacctgcaagtgttcccaaaaagaaaatcagagtaacaggaaatccacgatcc
atcgctccttcttccgtttttcacaacgggacggatgtcgtttacacttatcacggcatc
atgcaaatgaaagtagaagatgaaacgaccccgtccagaaagggcaggagagcaaacgtc
cgcgtgtcaagcggaggaacactgcagcaggcatttgcagtcccgtttaaatcgaaacag
aatctccagagaaagactgggaaatccaaggaaatgaggccgatgcaaggagaccaccat
tcaggtttcacttacatgtttctgcacatgggagattttggtgctcaaaaccacagccct
gccatggctgggatttga
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integrated database retrieval system
