Cynoglossus semilaevis (tongue sole): 103385458
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Entry
103385458 CDS
T04866
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csem03041
]
103385458 (dhx35)
Enzymes [BR:
csem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103385458 (dhx35)
Spliceosome [BR:
csem03041
]
Complex C
Other components
Complex C specific factors
103385458 (dhx35)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
ABC_tran
AAA_19
Cas3-like_C_2
nSTAND3
AAA_23
AAA_30
AAA_7
Motif
Other DBs
NCBI-GeneID:
103385458
NCBI-ProteinID:
XP_008317580
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Position
10:complement(19227276..19238446)
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AA seq
709 aa
AA seq
DB search
MEHKCDVEAKMAAPLSNMKFWKPGAEAPGISEERELNTETTGSPIIFNPHTTLSIEKQRQ
KLPVFKHRNNILFLLESFQTVIIVGETGCGKTTQIPQYLLEAGWAADGKVIGVTQPRRVA
AITVANRVAEERGALLGHEVGYTIRFDDRSDLHSTRIKFLTDGMLVREMMADPLLRKYSV
LMLDEAHERTLYTDIALGLLKKIQKKRPEMRLIVASATLDAEKFHDFFNQNESGDPAKDT
CGILTVEGRTFPVDVFYTVSPVPDYVKATVETVMKIHETEEDGDVLAFLTGQEEVEKVVS
LLQDEARSLARYGMKKHLRILPMYSGLPYAEQMKVFERAPSSVRKVVVATNIAETSITIN
GIVFVIDCAFVKLRAYNPSTAIESLLVTPISKASASQRAGRAGRNRPGKCFRLYTEEDFE
KLPSSTVPEMQRSNLAPVILQLKALGIDNVLRFSFLSPPPAQTMVQALELLYALGGLDHY
GRLTEPMGVRMAEFPLSPMFTKMLLESGNFGCSKEIVTIAATMQIQNIFVVPSNQKKAAA
REHRKFAVAEGDHLTMLNVYEAFLKHQKSSQWCQEHFLNYKGLLRAVMVREQLRRLMNKF
KVPRNSSEGDPDVILKCIVSGFFANAARIHHSGSYRTLRDDRELHIHPNSVLYGEKPPKW
VVFSEIVQTSKYYMRDVTAVESSWLVELAPHFYKEAKHSSLASKRSRVL
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggaacacaagtgtgacgtagaggccaagatggcggctcccctcagcaacatgaaattt
tggaagccgggagctgaggctccagggatctcagaggagcgggagttgaacacggagacc
accggctcccccatcatcttcaaccctcacaccacactctccatagagaagcagcggcag
aaacttcctgtcttcaagcacaggaataacatcctgttcctgttggagagttttcagacg
gtcatcatagttggagagacaggatgtggcaaaaccacacagataccccagtaccttcta
gaagcgggctgggcggctgatgggaaggtgattggagtgacacagcctcgacgtgtggct
gccatcaccgtggctaaccgtgtggctgaggagcgaggagcccttctgggccacgaggtg
ggctacaccattcgatttgacgaccgctccgaccttcattccaccaggatcaagtttctt
acagatggaatgttggtgcgtgagatgatggctgaccccctgctgagaaaatacagtgtt
ctgatgttggatgaagctcatgaaagaaccttgtacacagacatcgccctgggtctgctg
aagaagatccaaaagaaacgtccggagatgaggctgatcgtggcgtcggccactctggac
gcggagaaattccacgacttcttcaaccagaatgagtcaggtgacccagccaaggacacg
tgtgggattctgacagtagagggacgcaccttccctgtggacgtcttctacactgtcagt
cccgtccccgactacgtcaaagccacagtggagacggtgatgaagatccatgaaacggag
gaggatggagacgttctagcctttctcactggacaggaggaggtggagaaggtggtgtcc
cttctgcaggacgaggccaggtctctggcacggtacggcatgaagaaacatctgagaatt
ttgcccatgtattctggtctaccatacgctgagcagatgaaggtctttgagagagcgccc
tcttctgtccgcaaggtggtggtggccaccaacatagctgagacctccatcaccatcaat
gggattgtttttgtcatcgactgtgcgtttgtcaagctgagggcctacaacccttccact
gccatcgagtctctattggtcacgcccatctccaaggcctcggccagtcagagagcagga
cgggctggaagaaaccgacctgggaaatgtttcagactttacacagaggaggactttgag
aagcttccctcctccactgttccagagatgcagcgctccaacctggctcctgtcatcctg
cagctcaaggccttaggcatcgacaacgtgctgcgcttcagcttcctgtctcccccccca
gctcagaccatggtccaggctcttgagttgctctatgctcttggaggtctggaccattat
ggacgtctgactgagcccatgggtgtgcgcatggccgagttccctctcagtccgatgttc
accaagatgctcctggagtcgggcaacttcggctgctctaaagagatcgtcaccatagct
gccaccatgcagatccagaacatttttgttgtgccgtccaatcagaagaaagctgctgcc
cgggagcacaggaagttcgccgtggctgagggcgatcacctgaccatgttgaatgtgtac
gaggccttccttaagcaccagaagagttctcagtggtgtcaggaacacttcctcaactac
aaaggtcttcttcgggcagtcatggtgcgagagcagctccgacgactgatgaacaagttc
aaggtgccgcgcaactccagcgaaggtgatccagatgtgatcctgaagtgcatcgtctct
gggttctttgctaatgcagcacggattcaccactctggatcctacaggactctacgagat
gatcgtgaacttcacattcacccaaactcggtgctttatggagagaaacctcccaaatgg
gtggtcttcagtgagatagtacaaacgtccaaatactacatgcgtgatgtcactgctgtg
gagtcgtcctggttggtggagctggctccacacttttacaaagaggccaagcacagttcc
ctggccagcaagagatctcgagtcctgtga
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