Cynoglossus semilaevis (tongue sole): 103385554
Help
Entry
103385554 CDS
T04866
Symbol
ogg1
Name
(RefSeq) N-glycosylase/DNA lyase isoform X1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103385554 (ogg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csem03400
]
103385554 (ogg1)
Enzymes [BR:
csem01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
103385554 (ogg1)
DNA repair and recombination proteins [BR:
csem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
103385554 (ogg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
Motif
Other DBs
NCBI-GeneID:
103385554
NCBI-ProteinID:
XP_016891704
UniProt:
A0A3P8X105
LinkDB
All DBs
Position
10:20014921..20018119
Genome browser
AA seq
387 aa
AA seq
DB search
MAKHAVLSSGTHLWRSLACAKSELRLDLTLACGQSFRWRETAEGHWTGVMRGRVWTLTQT
DDTLWYHVYDERKCGTRKRTGDSSEQKLKEFVKEEEDGEEEEQLRDYFQLNVKLETLYTE
WGAADPHFKKIANIFTGVRLLRQEPTECLFSFICTSNNHISRITGMVERLCQALGAPLDQ
LDRTTYYDFPSLSALADGSVETRLRDLGFGYRAQFLQQSAKKILDSYGTQWLEGLRNVPY
LEAHDALRTLPGVGTKVADCVCLMSLDKAEAVPVDTHVWQIAKRDYQFASSGRQKSITDK
LHRDIGHFFRNLWGPYAGWTQSVLFCADLKKFQQLKETQSVEQPRNQEERVEEESDAAKS
ESKERSKPKKSNLCSEKTTTYVKKRRM
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacatgcggtactttcgtcgggaacacatttgtggagatcgctggcgtgtgct
aagtccgagctgcgtctggacttgacgctcgcctgcggacagtctttccgctggagagag
acggcggaaggccactggaccggggtgatgaggggacgagtgtggaccctgacccaaaca
gatgacactctgtggtaccacgtgtatgacgaaaggaaatgtggcacgaggaagagaacc
ggcgactcttcggaacaaaaactcaaagagttcgtgaaggaggaggaggatggagaggaa
gaagaacagctgagagactacttccagttgaatgtgaagctggagacactgtacactgag
tggggagcagcagacccccacttcaagaagattgctaatatctttacaggtgtgaggctg
ctgcggcaggagcccactgaatgtctgttctccttcatctgcacctccaacaaccacatc
tctcgaatcacgggcatggtggagcggctgtgccaggctctgggcgccccgctggaccag
ctggaccggaccacctactatgacttcccttcactgagcgctctggcagacggcagcgta
gagacccggctcagggacctcgggtttggatacagggctcagttcctgcagcagagcgcc
aagaaaattctggactcctacggaacccagtggctggagggattgcgcaacgtcccgtac
ctggaggcccacgatgctctgcgtactcttcctggtgttggcaccaaggtggcagactgc
gtctgtctgatgtcactggacaaagccgaggccgtgcctgtcgacacgcacgtgtggcag
attgccaagcgtgactaccagtttgcctccagtggccgacagaagagcatcacggacaaa
ctccacagagacatcggtcattttttcagaaacctctggggtccgtacgctggttggaca
cagtcggtgttgttctgcgctgacctcaagaagtttcagcagctgaaggaaacacagagt
gtggagcagccgaggaaccaggaggaacgtgtggaggaagagagcgacgcagccaagagt
gagagtaaagaacggtcgaagccaaagaaatcaaacctgtgtagtgagaaaactacgaca
tatgtgaagaagaggaggatgtaa
DBGET
integrated database retrieval system
