Cynoglossus semilaevis (tongue sole): 103385620
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Entry
103385620 CDS
T04866
Symbol
slc6a1
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
103385620 (slc6a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csem02000
]
103385620 (slc6a1)
Transporters [BR:
csem02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
103385620 (slc6a1)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
103385620
NCBI-ProteinID:
XP_008317775
UniProt:
A0A3P8X6U3
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Position
11:39493..51372
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AA seq
604 aa
AA seq
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MATNGTKASDGLVLTEMVNDAAATTPNDKPKTLVVKVQKKKEIPERETWAGKFDFLLSCV
GYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGMPLFLLETALGQYTSIGGLGVWKL
APMFKGVGLAAAVLSFWLNIYYIVIISWALYYLYNSFTAELPWQTCGNPWNTERCFTNYS
IADTRNLTSAVVEFWERNMHQLTDGLEKPGEVRVPLAITLAVAWVLVYFCIWKGVSWTGK
VVYFSATYPYFMLFILFCRGVSLPGAVDGILFYITPNFEKLKESEVWLDAATQIFFSYGL
GLGSLIALGSYNPFNNNIYRDSIIVCCINSFTSMFAGFVIFSIVGFMASVTKRPIADVAA
SGPGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPRLLRN
RREIFIAVVCLVSYIIGLSNITQGGLYVFKLFDYYSASGMSLLFLVFFECISISWFYGVN
KFYDNIEEMVGYRPCLWWKLCWVFFTPLIVAGVFLFSAVQMVPLTMGDYVFPSWGQGVGW
CMALSSMILIPGYMGYMFLTLKGTYKERLRMMIKPLVLVKSQENGPEQQTESQNQNPANE
EAYI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaacgggaccaaagcctcggacggactggtcttaacggaaatggtgaatgac
gcagcggccaccacgccaaacgacaaacccaaaacattggttgtaaaagtgcagaagaaa
aaggagataccggagagagaaacgtgggctgggaaatttgactttctactctcttgtgtt
ggatacgcaatcggactcgggaatgtctggagatttccttacttatgtgggaagaacgga
ggaggggccttcttgattccttactttttgaccctaatatttgctggtatgcccctgttc
ttgctggagacggccctcggtcagtacacttctatcggagggctcggagtctggaaactc
gctcccatgttcaaaggtgtgggtctggcagctgctgttctgtccttctggctcaatatc
tattacattgttatcatttcctgggctctttattatctgtataattccttcactgctgaa
ctgccatggcagacttgtggaaatccctggaacacagagcgctgcttcaccaactacagc
atcgcagacaccaggaacctcaccagcgctgtggtggagttctgggagcgtaacatgcac
caactgactgatggtctggagaagcctggggaggtcagggtcccactggctatcaccctg
gctgtggcctgggtgctggtctacttctgtatctggaagggggtcagttggactgggaag
gtggtctacttctctgccacatacccatacttcatgctcttcatcctgttttgtcgtggc
gtctctctgccaggtgcagtggatgggatcctgttctacatcacacctaattttgaaaaa
ctgaaggagtctgaggtttggctggatgctgcaactcagatcttcttttcctatggtcta
ggcctgggctccctcattgctctgggaagctacaatcccttcaacaacaacatatacaga
gattctatcatcgtgtgctgcatcaactccttcaccagcatgttcgctggctttgtcatc
ttctccattgtgggcttcatggccagtgtaacaaagagacctatagctgatgtggcagcc
tcaggacctggacttgcatttttggcctaccctgaggcggtcacccagctgcccatctct
cctctctgggccatcctctttttctccatgctgctcatgctgggcattgacagccagttc
tgcactgtagagggtttcattaccgctctggtcgacgagttccctcggcttctccgaaac
cgcagagagatattcatcgctgtggtttgccttgtttcttacatcatcggactatccaac
atcacacagggcggactctatgtattcaagctgttcgactactactctgccagtggaatg
tcgctgctcttcctggtcttctttgagtgcatttcaatttcatggttctatggagttaac
aagttctatgacaacattgaggagatggttggctacaggccttgtctgtggtggaagctc
tgctgggtctttttcactccactcatcgtggctggagtctttttattcagtgctgtccag
atggttcctctcaccatgggagactacgtcttccccagctggggtcagggtgtgggttgg
tgcatggccctgtcctccatgattctcatcccaggctacatgggctacatgttcctcaca
ctcaaaggcacatacaaagagcgcctgcggatgatgatcaagcctttggttctggtaaag
tcgcaggaaaacggcccggagcaacaaacggagagccagaatcagaatcccgcgaacgaa
gaagcgtacatctag
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