Cynoglossus semilaevis (tongue sole): 103385735
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Entry
103385735 CDS
T04866
Symbol
stau1
Name
(RefSeq) LOW QUALITY PROTEIN: double-stranded RNA-binding protein Staufen homolog 1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csem01009
]
103385735 (stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103385735 (stau1)
Protein phosphatases and associated proteins [BR:
csem01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103385735 (stau1)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
103385735 (stau1)
mRNA cycle factors
Stress granule specific factors
103385735 (stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Staufen_C
dsrm
DND1_DSRM
DSRM_2
DUF6896
Calpain_inhib
Motif
Other DBs
NCBI-GeneID:
103385735
NCBI-ProteinID:
XP_008317929
LinkDB
All DBs
Position
11:complement(1481770..1489079)
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AA seq
697 aa
AA seq
DB search
MSQLQFQCPSSPMSAAPAPVQLTQPGYSIPCASGTLPSESASQPIRSSALPAGSVTPYNT
TTTSTTIVTNMANPKEKTPMCLVNELARFNKIQPEYKLLSEQGPAHSKIFSVRLTLGDQH
WEAEGTSIKKAQHSAASSALTETTLPKPSVRSPRNTGRSPVDGITHTMELNALCLKLGKK
PMYKLIDPYPGMRSPNFHYVRAPGPYQRSMQQYYYPFPPMGPMIYQMELTIGGQQFIGKG
RSRXXXXXERCIKKKRSCFETWFLFFFXQTNGETEEENLNKSEISQVFEIALKRNLPVNF
EVLKEDGPPHMKSFIVRVLVGEFTGEGEGKSKKIAKKLAAAAALSELKKLPPIPCVERNL
PRIKKKTKSIIKLQTSPEYGQGMNPISRLAQIQQAKREKEPDYSMVTERGLPRRREFVMQ
VSVCGKSAEGMGPSKKVAKRNAAEKMLDLLGYKVPQPQPPKPALKTDEKVPVKKTGDGRK
VTFFEPGCGEEVALNSKEEEFRLPYLSHQQLPAGILPMVPEVAQAVGACQGPQGKDYGRA
VPNPGKATVTAMIANELLYAGTSLSAETVLKNKNSVVQRPAGPITRPSEQLSYLASVQGL
QVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVDSCHDMAALNILKMLSELDQQPHE
RTGNGPVSGCGKQELASDVHLRQANASTLAQTLDGAV
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagctccagttccaatgcccatcaagtccgatgtcggccgccccggcccccgtg
cagctgacgcagcctggatacagcatcccctgtgcttcggggaccttaccctccgagagt
gcgagccagccaatcaggagctctgctcttcctgcgggctccgtcactccctacaacacc
accaccacctccaccaccatagtaactaacatggcaaaccctaaagagaagacccccatg
tgtttggtgaatgagttagcccgtttcaataagatccaacctgaatataagctacttagt
gagcaaggaccagctcactccaagatcttctcagtgaggctcacgctgggagaccagcac
tgggaggccgaggggaccagcatcaagaaagcccagcattccgctgcttcttcggccctg
accgagaccacactccctaaaccctctgtgaggtcgccccgcaatacaggcaggagtcca
gtggatgggataacacacaccatggagctgaatgcactgtgtttgaagcttggtaaaaag
cctatgtacaaactcattgatccgtacccgggaatgagatcgccaaactttcactacgtc
agggccccggggccttaccagcgctctatgcaacagtactactacccttttcctccaatg
gggccaatgatttaccaaatggagctcaccattggaggccagcagtttattggaaaggga
cgctcgcgnnnnnnnnnnnnnntggagagatgtataaaaaaaaaaagatcctgttttgaa
acatggtttttgttcttcttttaacagaccaacggcgagactgaggaggaaaacctcaac
aagtcagaaatcagtcaagtctttgaaattgcacttaaacgcaacctgccggtcaacttt
gaggttttaaaggaagacggccccccgcacatgaagagttttatcgtgcgtgttctagtc
ggggagttcaccggtgagggcgaagggaagagtaaaaaaatcgccaagaagctggcggcg
gcggcggcgctgagcgagttgaagaagctgccccccataccctgcgtggagaggaatctg
ccccgcatcaagaagaaaaccaaatccatcatcaagctgcagaccagcccggagtacgga
cagggcatgaaccccatcagccgtctggcccagatccagcaggccaagagggagaaggag
ccggactacagtatggtgacggagaggggtctgccgcggcgcagagagtttgtcatgcag
gtgagtgtttgtggcaagtctgcagaagggatgggacccagcaagaaggtggccaagagg
aacgccgcagagaagatgctggacctcctgggatataaagtgcctcagccccagcctccc
aaacctgctctgaaaacagatgagaaggtccccgtgaaaaaaacaggagatgggcgtaaa
gtgaccttttttgaacctggctgtggagaagaggtggcgctgaattctaaggaggaggag
tttcgactgccttacctgagccatcagcagcttcctgcaggtatcctcccgatggtgcct
gaggtggctcaagctgtgggggcctgccaaggaccccagggcaaggattacggtcgagcg
gtgcccaacccgggcaaagccacggtcactgccatgatcgccaacgagctcctctacgcg
gggacatccctgagcgccgagaccgtcctgaagaacaagaacagcgtcgtccaacgtccc
gccggacccatcacccggccgtcggagcagctcagctacctggcgtcggtgcagggcctg
caggtggagtacaaggacttccccaaaaacaataagaacgagtttgtgtcactgattaac
tgctcctcccagccgccgctcatcagccacgggattggcaaagacgtcgattcctgtcac
gatatggcggcactgaatatattaaagatgctctcagagttggaccagcaaccacacgaa
agaacaggaaacggaccggtctctgggtgtggcaaacaggagctggcgagtgacgtgcac
ctcagacaggctaacgcaagcacattggcacagactctggatggcgctgtttga
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