KEGG   Cynoglossus semilaevis (tongue sole): 103385745
Entry
103385745         CDS       T04866                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
csem  Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:csem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csem03009]
    103385745 (rrp9)
Ribosome biogenesis [BR:csem03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    103385745 (rrp9)
SSDB
Motif
Pfam: WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_TEP1_2nd WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_EML WDR55 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR41 Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_IP5PC_F Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_Aladin Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_RIG_2nd Beta-prop_Vps41 PEP5_VPS11_N Beta-prop_WDR75_2nd Beta-prop_WDR19_1st Beta-prop_ACSF4 WDR54 DUF3752 VPS11_N WD40_like Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 103385745
NCBI-ProteinID: XP_008317943
LinkDB
Position
11:complement(1377478..1383445)
AA seq 483 aa
MSFFIKKKENPRLLKKSHSAGTGPKRKGDVTVGVRNKVKKGNSRYNDEISSDSEPESPTV
PRKIQKKAEYEYTETPQEKKLRLAKLYLEQLKEADDKRADDEDFGNALVAGKLEEEVLEQ
KGKLQRLIAQDLLPPDASEIRLLRGHKLPITCLVISPDDKCIFSAAKDCSIIKWDVESGK
KLHTIPGGRKGTEDRHVGHTAHVLCMTISSDGKYLATGDMNKLIMIWEAETCKHIYKFTG
HKGPVSGLSFRKGTHDLYSASHDRSVKVWNVDENAYVETLFGHQDVITGLDGLSRECCVT
AGGRDGTVRVWKIAEESQLVFHGHEGSIDCVQLINEEHMITGADDGSVCLWSVNKKKPLC
TVKQAHGCHGDTSLEQPHWISSVAALQNSDTVASGACGCSHNSLVQVWKCGQKYRGLQPL
FSVPLSGFINCLKFSSSGQFLVAGVGQEHRLGRWWRLKEAKNGIYIIPLKRKPSTPEEVK
VAE
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgtcattttttataaagaaaaaagaaaaccccagattgttaaagaagtctcacagcgcg
gggactgggcccaaacgaaagggcgatgtgactgtcggtgttaggaacaaagtgaaaaaa
ggcaactccagatacaacgatgagatttccagcgactctgaaccagagagccccacagta
cccagaaagatccagaaaaaagctgaatatgaatatacagaaacgccacaggagaaaaag
cttcgactggccaaactttacctcgaacaactaaaggaagcagacgacaagagagctgat
gatgaggactttgggaatgcgttggttgcaggaaaacttgaagaagaagtgctggaacag
aaaggaaaacttcagcgactaattgctcaagatcttcttccgccagatgcttcagaaatc
cggttactcaggggacacaaacttccaatcacttgtttggtcatctcgcccgacgacaag
tgcatcttttcagctgccaaagactgttccatcattaaatgggatgtcgagagtggcaag
aaattacacacaatacctggaggaaggaaaggcacggaggaccgccacgttggtcataca
gcgcacgtgttgtgcatgacgatatcctcagatggcaaatatttggcaactggagacatg
aacaaactgattatgatctgggaggcagagacgtgtaaacatatttataaattcacagga
cataaaggccccgtgtcgggtctttcgttcaggaaaggaactcatgacctgtacagtgca
tcacacgaccgttcagtcaaggtgtggaacgtagacgagaacgcatacgtagaaactctt
tttggccaccaggacgtcatcacagggttggacggtctgagccgtgagtgctgtgtgact
gcaggtggacgtgacggcaccgtgagggtgtggaaaatagccgaggagtctcagctggtg
ttccacggtcacgagggctccatcgactgtgttcagcttataaacgaggagcacatgata
acgggagcagacgacggctctgtgtgtctgtggagtgtcaacaagaagaagcctctctgc
actgtaaagcaggcgcacggttgccatggcgacacatcgctggaacagccccactggatt
tcttcggtggctgctcttcagaactcggacaccgtcgcctcaggtgcctgcggctgttca
cataactcactggtccaggtctggaagtgtggtcagaaataccgtggcctccagcctctc
ttcagtgtccccctgtctggtttcatcaactgcctgaagttctccagctctggtcagttc
ttggtggcaggagttggacaagagcacaggctgggccgatggtggagacttaaagaggcc
aagaacggaatctacatcatcccgctgaaaaggaaaccttcaactccagaggaggtcaaa
gtggctgaatga

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