Cynoglossus semilaevis (tongue sole): 103385921 Help Entry 103385921         CDS       T04866                                  Symbol col7a1 Name (RefSeq) collagen alpha-1(VII) chain   KO K16628   collagen type VII alpha Organism csem  Cynoglossus semilaevis (tongue sole) Pathway csem04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:csem00001]  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     103385921 (col7a1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen fn3 VWA Kunitz_BPTI Pur_ac_phosph_N VWA_2 DUF4992 DUF1194 fn3_2 Fn3_Dep-1_2nd Motif Other DBs NCBI-GeneID:  103385921 NCBI-ProteinID:  XP_008318171 LinkDB All DBs Position 11:complement(3349999..3396509) Genome browser AA seq 3045 aa AA seqDB search MSEKLMEFKEQNSRCNNVQAADIVFLVDGSSSIGRANFVQVKGFMAGIVKPFASSFTFST YLNGTELVTAIEDLNYKGGNTRTGAGLKFLSDNFFNPSSSRDVPKITILITDGKSQDNVQ DPAQKLRSQGVHVFAVGIKSADRSELAQISSQPSSDFTSYVGDFKLLNTLLPLVGPRVCS QAGGIYASDEAFSGPSNLQFTGQTSDSLRFRWSPAGGPVSGYVVQYVPLSGLGQPISAEL KQETVSGNQRTFTARELRSGTDYLVTVIAQYPNSEGESVSAKQRTRFLPGVSSLRLIQAG FFSLTVGWDQPSSAVQGYRLTYGLRGQPADQLLFLSVPSDSTSATLQSLQPDTEYVINLY PLFPRNSATPSTLNARTLRLEAVQQLSVETQSEGSVVLRWAAVNGARAYRVVWGPFTGQS FETVEVAGDIVFHTLSRLQPDIEYIVTIIPLYEGNTEGPAATARFKIERQEQQVLRAATT GSSSIRLTWRIIPSSQGYRLEWKEGEGGRVQSLSFPRGTSSYELTGLRPRTEYIFTMYTL YEGREEATPVSTSSREEQPVGRVSNLRVVESLGRTVRIGWTGVAGATQYRIIILDTDAGT EEIRTVSGNQTTLDLRDLTVGVSYGVSVTALVGENEGDQVTVYIKPEQSVGKVSNLRVIH ANSRKIRISWTGLTEATGYKVTWRQGNTGIEQSRLLGPETRTFTIDGLQPDGDLIIGVAV VVGENVGEVVPLSARTNPHGGSVSGFRIVDVTSQRIRLAWSTSSRATGYKITWSSSNGEE TSRIVPADVSSFTIDGLLSDSAYSVQVSALSGSREGSPVSLNIRTESDQSVVGTVTSLQV QEAQGEDVRITWVGVQGATAYRVTWRRTDGGEERSRLVAGDVTSVDLDRLEPGAQYEVQV MALVQNREGSPVSVRITTPGTDTSPLPTTTLRVTEVTQDSVRLDWFPLQGATRYIVRWKE ETDRGEGLSVSLPASSSSYLVSGLRLGRRYRFSVQPAFERGLGTESAVDEHTVCVNGRLD VVFLVPASTDRSNLARPLRELLTSAVRSLNTFGPRDSQVGVVVYGYRPKTWFLLNRHSRL DTLLQEIQATPFDESRGNNMGEAMAFAGQYLLTTSAGRRTNVPGVVVVIADKQSADNLTP AADDLRATGVTVLAVGIEQADTEELRRAVTDGSTQNILFTRDAAQLYSLHSDLADLLCGI ARIPAGGPRPQQCTVQCPQGEKGNRGDKGERGRDGVDGRKGESGRDGLPGREGPRGPEGR PGPPGQSHPFEPSIGVKGEKGERGFPGIDGNPGLPGRPGAPGSAGVPGSQGLPGSRGTSG EPGSTGPQGPKGDRGERGEPGSSISGGGLPGRKGEPGIPGIPATPGRPGSDGVKGERGLP GLPGQDGRSGIPGSPGLGVKGDKGSPGERGPPGVGSGVAVKGEKGSPGSPGPPGTQGARG LTGPQGSKGERGDGGDGLPGPPGKQGEPGDRGPRGPPGEIGSKGDRGQPGEPGSQGDRGE RGPTGETGERGDPGKPGLIGPAGLRGLPGPTGPTGEKGSDGARGEPGKSTPGFPGKKGEP GDRGLPGPDGQRGEKGDAGLRGEKGSPGSSAIGTKGEHGEKGLPGVNGRPGAKGDSGEPG ERGENGRPGLPGKPGLPGKEGERGEKGDEGTPGESGLPGKPGERGLRGLSGQHGRPGEKG DVGDPGEHGRNGSPGPAGLKGDKGAQGLQGLPGAPGKVAELQGQLKGVKGDKGDAGSPGE QGGKGQKGEAGTPGASGLRGPEGQRGPAGTRGDTGDRGTPGEKGERGIPGLDGRPGLDGK PGVAGPPGQRGDPGKQGDPGRDGLSGLRGEQGIQGPVGPPGTPGTPGKAGEDGKPGAPGK MGEDGVPGEDGRKGDKGDSGSAGRDGHDGQKGDRGATGPVGPSGPQGQPGVPGIIGPPGQ VVYVKGVEAAPIPGVQGPPGTPGVPGIPGAVGARGERGSPGLKGDIGDPGEDGAPGKPGT PVDVQKALANLGIQVSDLKVVVDKKDVFAAPALQKPEKGEKGDRGEQGQRGPSGQEGPRG FAGERGTKGDQGDRGPVGPAGPPGRAIGERGLEGPPGPAGESGKPGIPGVPGRAGELGEA GRPGDKGERGERGEKGEAGKTGLSGPAGPQGQKGESADSVLVGTPGARGSPGITGQKGEP GASGPPGPKGDRGFMGQKGDKGDRGDTGEKGRDGSDGSPGEPGKPGQDGKSGLPGFPGVL GRPGNPGEPGIRGPTGPLGPTGLPGPPGVKGNQGEPGVGVQGSPGAQGSTGLPGPAGPPG AVGPQGPPGLPGQVGEAGKPGVPGRDGVPGKEGIPGKPGKQGIAGPAGSIGLKGEQGDSG PPGKAVAGPPGPKGAIGPPGHTLPGLTGERGLPGEKGNRGDKGVAGGKGERGQDGDSGDP GEDGAQGSPGPKGDKGEKGIGLAGPPGRDGPPGLKGDPGLPGPAGPPGPLGKTGAAGQPG LRGENGQPGPPGPPGERGLQGFVGRVGNVGPAGPPGPTGEAGAPGTNGGKGDKGEIGVGV PGTRGERGDPGPRGEEGRPGLDGERGSTGPQGGRGIRGEKGDSGLHGEKGDKGDTVLVGG PAGEKGNKGETGDRGPKGVQGEKGTKGQEGPIGQQGLRGEPGERGSGGFPGARGPGGQKG EAGQPGVPGEAGLPGKDGLSGLRGDKGVTGPLGMRGVKGDRGPKGNCGGDGPKGDKGDGG IHGRAGLPGRKGEQGDIGPAGAPGTPGKEGLVGPKGDRGFDGLSGNKGIQGDKGERGPSG LPGPPGPRGVDGIAGLSGPPGPPGATGPEGLQGQKGERGPNGPSIVGPRGIPGIPGERGE PGELGADGTKGDRGEPGMTEGEIRTYVRSEMSQHCACGGSGPNLRSEPAIRALPPTEQQP GDEGRELRVVVNTNDPDYEHIYSIENYDDPLDELLYFATPATLSDGETDQKESGKTAKVE PSKSANADTKKTALASGRAVRKSVSVRTKRRVKGEAPADLCQLPMEEGSCGRYTLRWYFN PQRRACRPFVYSGCEGNDNRFLHLEDCEEACLEEADGSPSLTTPR NT seq 9138 nt NT seq  +upstreamnt  +downstreamnt atgtcagaaaaactaatggagttcaaggagcaaaacagcaggtgcaacaatgtgcaagcg gccgatatcgtgttcctggttgacggctcctccagcatcggccgcgcaaacttcgtgcag gtgaagggcttcatggcaggaatcgtcaaaccattcgccagctctttcaccttttctacc tacctgaatggcaccgagctagtcactgccatcgaagatctgaactacaaaggtggaaac acacgcacgggcgctgggctgaagtttctctccgacaacttcttcaacccttcgtctagt cgggatgtgccaaagatcactatcctgatcaccgatggaaagtcacaagacaatgttcag gacccggcacagaagctgcgcagtcaaggagtgcatgtttttgcagttggcataaagagt gcagacaggagtgaattggctcagatctcctcgcagcccagtagtgatttcacctcctat gtcggggacttcaaacttctgaacacacttcttcctcttgtgggaccacgggtctgttcc caagctggaggaatctatgccagtgatgaagcattttctggtccgtccaaccttcagttc acaggccagacatctgattccctcagatttcgctggagtccagccggaggtcctgtcagt ggctatgtagttcagtatgtaccactttctggtctgggtcagccaatatcagcagaactg aagcaggagacggtctctggtaatcagaggaccttcactgcccgagagttgcggtcaggg acagactacctggtgacggtcatcgcccagtaccccaacagtgaaggagagtctgtctcc gccaaacagagaaccaggttcttgcctggtgtctccagtctacgtctgatccaggctggc ttcttctctctgactgtgggctgggatcagccttcgtctgcggtccagggctacagactc acctatggactccgaggccaaccagcagaccagctgttgttcctgtctgttccctccgac tccacctcagccacactgcagtcccttcagcccgacacggagtacgtcatcaatctctac cctctgttcccccgcaactctgccactccgtccacactgaacgcccgcacactgcgcctg gaggcggtgcagcagttatcggtggagacacaatcagagggcagcgtggttttgcggtgg gctgccgtcaacggggctcgggcctatcgtgtggtctggggtccatttacaggtcagagt tttgagacggtggaagtcgccggtgacatagtgtttcacactttgtccagactgcagcct gacatcgagtacatagtcaccatcatccccctgtacgagggcaacactgaaggccctgca gccacggccaggttcaagatagagcgtcaggagcagcaggtcctcagagcagccaccacc ggctcctcctcaatccgcctcacctggagaatcatcccgtcctctcaggggtatcgcctg gagtggaaggagggggaaggtggccgtgtgcagagcttgtcctttcccagaggtaccagc agctacgagttaacaggcctccgtcctagaacggaatacatcttcaccatgtataccctg tatgaaggtcgtgaggaggccacgcctgtctctaccagctccagagaggaacagcccgtg ggcagagtgtccaacctgagggttgtggagtctctgggcagaactgtcagaattggctgg acaggtgtagccggggccacacagtaccgcatcatcatcctggacacagatgcgggaact gaagaaataagaactgtcagtggaaaccaaacgacccttgacctcagagacctgacggtg ggggtgtcctacggtgtgagtgtcactgcactggtgggagaaaatgaaggagatcaagtc actgtctacataaaaccagaacaaagtgttggcaaggtgtccaacctcagggtcatacat gcaaacagtcggaaaatccgaatctcctggaccggtctgactgaggccacaggttacaag gtcacgtggagacaaggaaacacagggatagagcagtctcgtcttctgggccccgagacc aggacctttaccattgacggtcttcaaccagatggggacctgatcattggtgtagcagtt gtcgttggagagaatgtcggggaggtagtgcctctgtctgctcggactaaccctcatgga ggatcggtgtctggatttcgaattgtagacgtcacatctcagaggatacgtctcgcatgg tccacttcctccagggcaacgggctataagatcacctggagcagctcaaacggagaagaa acgagccgtattgtaccagctgatgtttcctccttcaccatcgatggtctgctgtcagac tcagcctacagcgtgcaggtttcagccctgagtggttctagagaaggaagccccgtctcc ctgaacatccgaacagaatctgatcagtctgtagttgggacagtgacgtccctgcaggtg caggaggctcagggagaagatgttcgaatcacctgggtgggcgtgcaaggagcgacggct tatcgtgttacctggaggaggacagatggaggcgaagaaaggagtcggctggtggcggga gacgtgacttccgtggatttggaccgcctggaacccggagcacagtatgaagttcaggtc atggctttggttcagaacagagagggatctcctgtatctgtcagaatcaccacacctggt acagatacttctccactacctacaacaacgttgcgagtaacagaggttacccaggattca gtgcggttagactggttcccacttcaaggtgccacaagatatattgtacgctggaaagag gaaacggacagaggtgaaggcttgtctgtgtcactgcctgcgtcgtccagctcctacctg gtgagcgggctgcgtttaggacgacgataccgcttcagcgtccagcctgcttttgaacgg ggactgggaacagagagtgctgtggatgaacacactgtgtgtgtgaacgggcgtctggat gtggtgtttctggtgcccgcgtccactgatcggtccaacctcgcaagacctctgcgtgaa ctcctgaccagtgcagtcaggtcattaaacacctttggaccccgtgactcacaggtggga gttgtagtttatggttacagaccaaaaacatggttcctgcttaaccgccacagcagatta gacaccctgctccaagagatccaggccacgccctttgatgaaagccgaggaaataacatg ggtgaggccatggccttcgccggacagtatcttctgaccacgtcagctggacgtagaacc aatgtccctggtgttgttgttgttattgctgacaaacagtcagctgacaaccttacacca gcagccgacgatctccgagctacaggtgtcacggttttagccgtgggtatcgagcaggca gacaccgaggagctacgtcgagctgtgacagacggcagcacccagaacattctgtttaca cgagatgcagcacagctgtactcattacacagtgatctggcagatttgctgtgcggaatc gcccgaataccagcggggggtccaaggccacagcagtgcactgttcagtgtccacaggga gagaaaggaaatcgtggagataagggtgagcgaggcagagatggagtagatggacgcaag ggagagtctggtcgtgatggtttacctgggagagaaggtccacgaggccctgagggacga cctggaccaccaggacagagtcacccgtttgaaccctcaatcggggttaagggagagaag ggggagagaggatttcccggtattgatggaaatcctgggttgccgggacgacctggtgcc ccaggaagtgcaggagtcccaggttcacagggccttcctgggagcagaggaacctcaggt gaaccaggttcaacagggcctcaaggaccgaagggtgacagaggtgaaaggggtgaacca ggctcttccatatctggaggaggtcttccagggaggaagggagaaccaggcatcccagga ataccggctactccaggtcggccaggcagtgatggggtcaaaggagagcgtgggttaccg ggcttaccaggtcaggatggtcgttctggaatcccaggatccccaggtctcggtgttaag ggagacaagggcagcccaggggaaaggggacctccaggagtaggcagcggggtggccgtg aagggcgagaagggttccccaggttctccaggacctccagggactcagggtgctagaggg ctaacaggaccacagggcagcaaaggagagaggggtgacggtggtgacggacttcctgga cctccaggcaagcaaggagagcctggtgacaggggtcctcgtggtcctccaggagaaata ggcagcaagggcgaccgaggacagccgggagaaccaggatcacaaggagacaggggagaa agaggtccaactggagaaactggagaaagaggggatccagggaagccaggcctcataggc ccagcagggttaagaggtttacctggacccactgggccaacaggagaaaagggaagtgac ggagcgagaggagagcccggcaaaagcactccaggttttccaggaaagaaaggtgaaccg ggcgaccgaggtttacctggtcctgatggccagaggggagagaaaggagacgctggacta aggggggagaaagggtctccagggtcaagtgccataggcactaaaggggaacatggagag aaaggacttcctggggtcaatggaagaccaggtgccaagggagattctggagaaccgggg gagagaggagagaatgggcgtcctggacttccaggaaagcctggtcttccaggaaaggag ggagagcgaggggaaaagggtgatgaaggcactcccggagaatctggacttcctggaaag ccgggagaaagaggattgaggggactgagcggtcagcacgggcgtccaggagagaaaggc gacgtcggagaccccggagagcatgggcggaatggcagccccggacccgcaggactgaag ggagataaaggagcgcagggccttcaaggacttccaggagcaccaggaaaagtggctgag cttcaagggcagctgaaaggagtcaaaggagataagggtgacgctggcagcccaggagag caaggcgggaaaggtcagaaaggcgaggcgggaactcctggagcctcaggcctgcgaggt cctgagggacagagggggcctgcaggcacaagaggtgacacaggagacagggggacacct ggagagaagggagaaagaggaatccctgggttggatggacgtccaggtctggatggtaaa ccaggtgttgctggaccacctgggcagaggggtgatcctgggaaacaaggcgatcctgga agagacggtttatcaggacttagaggtgaacagggaattcaaggacctgtcgggccccca ggaaccccgggaacgcctggtaaagccggtgaagacggcaaacctggagctcctggaaaa atgggtgaagacggagtgccaggagaagatggaagaaagggtgacaaaggagattcggga tcagctggaagagatggtcacgatgggcagaaaggagaccgaggagctactggacctgtg ggcccttctggacctcaagggcagcctggagtacctggtatcattgggccccctggacag gttgtctatgtaaaaggagttgaagctgcaccaatacctggagtacaggggcctccagga actcctggcgtccctggaatcccgggagccgtaggagccagaggtgaaagaggttctcct ggacttaagggagacattggagacccaggagaggacggagccccgggcaaacccgggacg ccggtggatgtacagaaagctctggccaaccttggtatccaggtttctgatttgaaggtg gttgtggacaaaaaggatgtttttgcagctcctgcacttcaaaaaccagagaaaggagaa aagggagacagaggggaacaaggacagagaggcccgtctgggcaagaggggcctcgtggt tttgccggagagagaggaacaaaaggagatcaaggggatcggggtccagtgggaccagca ggtcctcctggacgagcgattggagaacgaggcctcgagggaccccccggacctgcagga gagtctggaaagccaggtatacctggtgtacctggacgagctggagaactgggagaggcc ggaagaccaggtgacaagggcgagcggggtgagagaggtgaaaaaggagaggctgggaaa actggcctatcagggcccgccggtcctcagggtcaaaagggagaatctgctgattcggtg ctggttggtacgcctggagccaggggttctccagggataacaggacagaagggggagcct ggagcatctggaccaccaggacccaaaggagacagaggtttcatgggacagaaaggtgat aaaggagacagaggagacactggagaaaaaggacgggatggatcagatggatcaccaggc gaaccgggaaaacctggtcaagatgggaaatcgggcttgcctggattccctggagttctg ggcagaccgggaaacccaggagagcctggtatacgaggaccaactggaccgttgggtcca acaggacttccaggtccaccaggtgtgaagggtaatcaaggagaaccaggcgtcggagtc cagggttctcctggtgcccaggggagcacgggtcttccaggacctgcaggtcctccagga gctgtgggtccacaaggccctccgggtctgccaggacaggtgggtgaagcaggcaaacct ggagttcctggaagagatggtgttcctggaaaagaaggaattcctggcaaaccaggaaag cagggcatcgctggacctgcaggctctattggcctgaagggggagcagggggacagcggt ccaccagggaaggcagttgcaggacctcctggaccaaagggagcaatcggcccccccggt cacactctacctggcctcacaggagagaggggtctgcctggagagaagggaaatagagga gacaaaggtgtcgctgggggcaaaggggaacgaggacaagatggtgattctggagaccct ggagaagatggggcacagggatctccggggccaaagggagataagggtgaaaagggcatc ggactggctggtcctcccggtcgagacggtcctccaggtctgaagggagacccaggcctt cctggtcctgccggtcctccaggaccactgggaaaaactggtgctgcagggcaacctggt ctaagaggggagaatggacaacctggacctccaggacccccgggggagaggggtcttcaa ggtttcgttggccgtgttggaaatgtgggaccggcgggtcctcctggacccactggagaa gctggcgctcctggtaccaatgggggcaaaggagacaagggagagattggtgttggtgtc cctggtacgagaggagagcgaggagatccaggacccagaggagaggaaggtcgccccggt ttggatggagaaagagggtcaacaggtcctcaagggggtcgtggtattcgcggagagaag ggggattctggacttcatggtgaaaaaggagacaagggggacacggtgctggtggggggg ccggctggagaaaagggcaacaaaggcgaaacaggcgaccgggggcctaaaggtgttcag ggtgaaaagggaacaaaaggccaagagggtccaataggacagcaggggctgaggggagaa ccaggggagaggggatcgggtggattccctggtgctcgtggccctggtggacagaaggga gaagctggccaacctggagtaccaggagaagctggtttaccaggaaaagatggactatct gggcttaggggggacaagggagtgactggtcctctgggaatgaggggggtcaagggtgac cgaggacccaaggggaactgtggaggcgacggacccaaaggagacaagggagacggcggt attcatggacgagccggcctgccggggagaaaaggtgaacagggtgatattggacctgcc ggtgcacctggtactcctggaaaagaaggactagtgggccccaagggagaccgcgggttt gatggattgtcaggaaacaaaggaatacagggagacaaaggggaaaggggtccttcaggt ctccctggacctccaggtccccgaggagtggatgggattgccggtttgagtgggcctccg ggcccccctggtgctactggtcctgagggtctccaggggcaaaagggagagagggggccg aacggcccctccattgtgggcccacgcggtatcccaggaatcccaggagagaggggggag ccgggagagctgggcgcagatggaaccaagggagatagaggagagccaggcatgacggag ggtgagatcagaacatacgtccgctccgagatgagtcagcactgtgcgtgtggaggttca ggaccaaaccttcggtccgagcccgccatcagagctctacctccaacagagcaacaaccg ggtgacgagggccgtgagctgcgtgtggttgtgaatactaacgaccccgactacgagcac atttactccatcgagaactacgatgacccgctggatgaactgctgtactttgcaactcct gccaccctgagtgatggtgagactgaccaaaaggaatcaggaaaaacggctaaagttgaa ccaagcaaatcagcaaatgctgacacgaagaaaacagcgttagcttctgggagagcagtc agaaagtccgtatcagtcaggaccaagaggagagtgaaaggggaagctccagccgacctg tgccagctgcccatggaggagggaagctgtggacgatacactctccgctggtacttcaac cctcagcgcagagcctgcaggccttttgtctacagcggctgtgaaggaaatgacaatcgt ttcctccacttggaagactgtgaggaagcctgccttgaagaggctgacggttcaccttcc ctgacgacgccgcggtga

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