Cynoglossus semilaevis (tongue sole): 103385938
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Entry
103385938 CDS
T04866
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103385938 (ccdc174)
03041 Spliceosome [BR:
csem03041
]
103385938 (ccdc174)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103385938 (ccdc174)
Spliceosome [BR:
csem03041
]
Complex C
Other components
EJC/TREX
103385938 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
103385938
NCBI-ProteinID:
XP_008318195
UniProt:
A0A3P8UQY1
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Position
11:complement(3772016..3776170)
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AA seq
600 aa
AA seq
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MDKKKKPFDVTASSLVDLKAELYRKQEQFKKDKLGQDSAYTGLKSKIKEKKPSVWIKQNP
GVSARAEKDSEQIAEEQKSLTESRRKLEEKAKIYEQMTKGDFPDEETENLFLVDFTQKII
EQKKQTFVQKEVARHEDEESDTLTPIPAPQHPDEEWVDYVDSLGRSRRCMKKDLPDFKKM
DQDFQGKASSEKTLLSEDMRRELQRQEWEREEEEAMQRPVGPIHYEDMRGQEARELGVGY
FAFSQDEEQRRKQREALDMLRGQTTEQRSKRERLKEKREAMLQARLAKVRQRKMKNKPEG
TEEEQENENKGKKDDDDEDLLGPPPPPEENPDVSILKKVEVEIQERRDTKPGVPHVREWD
RGKEFMFSEWKNRCREEXXXXXXDGKKNEPQVKKYKKSYNWMKAEPEPEPEPEPEETSES
REDSQPQAEVTASPKPEEHQSTSSPQCPLPQLPVTSPPVSAPPFNPHYPPPPPPSFYPPF
PPPFPPQFGAPPHMPPAYPPQYPPRYTPQYTPHYLPQFPPQYLPQFPPQQQNASQSQPEP
DPPGQPDPPGQPDPPGQPDPPGQPDQPGQPDPPGQPDQPTPTTFQSLDDMLSFYRNASSR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaagaagaaaccgtttgatgtgacggcttcttcgttagtcgaccttaaagct
gaattgtatcggaagcaggaacagtttaaaaaagacaagcttggacaagacagcgcctac
acaggcctcaaatcaaaaatcaaagaaaagaaacccagtgtttggataaagcaaaaccct
ggtgtttcagcaagagctgagaaagattcagaacagattgccgaggagcagaagagtctc
actgaatcaagacgcaagttggaggaaaaagccaagatctatgagcagatgactaaagga
gattttccagatgaagagacggagaatctgttcctggttgatttcacacagaagattatt
gagcaaaagaaacagacatttgtgcagaaggaagtagcgagacatgaagatgaagaaagt
gacacgctgactcctatacctgctccacaacacccagatgaggaatgggtggattatgtt
gattctctgggtcgatctcggagatgcatgaaaaaagatctcccagattttaagaaaatg
gaccaggattttcagggaaaagcttcgtctgagaagactctgctgtcagaggacatgcgt
cgggagctgcagaggcaggaatgggagagagaggaagaggaggcgatgcagaggcctgtt
ggaccaattcactacgaggacatgagaggacaagaggctcgagagctcggcgtgggctac
ttcgccttttctcaggatgaagagcaacgtaggaagcagagagaagctctcgacatgctg
agaggccagacaacagagcagcgcagtaaaagagaacgactgaaggagaaacgagaggcc
atgctgcaggccagactggccaaggtgagacagaggaagatgaagaacaaaccagaagga
actgaagaggagcaggaaaacgaaaacaaaggaaagaaagacgacgatgatgaagacctc
ttgggaccaccacctccaccagaggagaaccctgatgtcagtatactgaagaaggtggaa
gtggagatccaggagagaagagacaccaaaccaggagttcctcatgtcagagagtgggac
agaggcaaagagtttatgtttagtgaatggaagaatcggtgtcgggaggagnnnnnnnnn
nnnnnnnnagatgggaagaaaaatgaacctcaagtcaaaaagtacaaaaagtcctacaac
tggatgaaggcagagccagagccagagccagagccagagccagaggaaacctctgagagc
agagaggactcacagcctcaggctgaagtcacagcttcaccaaaacctgaggaacatcag
agcacttcttcaccacagtgccccctgcctcagctccctgtcacttcacctcctgtgtct
gctccaccctttaatcctcactaccctcctcctcctcctccttcgttttatccacccttc
cctcctccgtttcctcctcagttcggagctccacctcacatgcctcctgcctatccaccc
cagtatccaccccggtatacaccccaatatacaccccactatctaccccagtttccaccc
cagtatctgcctcagtttccacctcaacagcagaatgcctcccagtctcagcctgagcct
gatccgcccggtcagcctgatccgcccggtcagcctgatccgcccggtcagcctgatccg
cccggtcagcctgatcagcccggtcagcctgatccgcccggtcagcctgatcagcccacg
cctacgacttttcagagtctggacgacatgctgtccttttacagaaacgcctcctcgcgt
taa
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