KEGG   Cynoglossus semilaevis (tongue sole): 103386192
Entry
103386192         CDS       T04866                                 
Symbol
col4a5
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem04510  Focal adhesion
csem04512  ECM-receptor interaction
csem04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:csem00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103386192 (col4a5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103386192 (col4a5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103386192 (col4a5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csem04147]
    103386192 (col4a5)
   00536 Glycosaminoglycan binding proteins [BR:csem00536]
    103386192 (col4a5)
Exosome [BR:csem04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   103386192 (col4a5)
Glycosaminoglycan binding proteins [BR:csem00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   103386192 (col4a5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 103386192
NCBI-ProteinID: XP_008318574
UniProt: A0A3P8UCZ0
LinkDB
Position
1:complement(23726499..23757692)
AA seq 1675 aa
MKSSAVPLLFALTLSVALRLTDSAACQGCAGSKCDCRGVKGDKGERGFPGLTGQPGVPGF
PGPEGPIGPRGEKGSEGPHGLSGPKGIRGPSGLPGFPGTPGLPGLPGQDGPLGPRGVPGC
NGTKGERGFPGAGGIPGQSGLPGPPGLTGPKGDPGDIISTNQFGEKGAVGLPGLPGVPGS
PGSPGLPGPTGPLGQRGYEGRPGPPGPPGPKGNMGQNFQGPKGEKGEPGLQGPPGPPGQV
GEQNRPSITEIQRGDKGDPGPPGPRGDQGYPGSPGPSGGAKGEKGEAGEAGKRGKPGKDG
DPGPPGFPGTKGDGGLPGSPGRDGERGQKGDRGFQGPPGLVIGGQTGGQVGPKGEPGFPG
SPGYKGERGPPGLTGPPGTPGLPAIGGSGQPGSPGYPGERGQKGESGAQGITLPGPPGRT
GAPGPQGPQGPPGPPGFSTGQNCEPGNPGRPGVQGERGYPGESGQKGEKGDTCVNCYGGT
NPIPGPQGPPGQPGLPGIPGSPGTKGDRGFPGAPGTIGPAGNPGFPGTPGLTGEKGDPGE
AITVSGIRGDKGDTGFPGPPGLPGLDGRPGRDGQPGLPGPKGASGSLLVKGERGTPGEPG
AAGIPGDRGPPGSPGFGPAGPVGEKGVQGVSGRPGAPGLPGAKGAPGQATAAKGTPGLRG
EDGEPGLPGTPGSPGSPGQPGFPGLPGAKGDPGLPGIGLPGPPGSKGFPGIPGQPGASGG
PGRPGIDGLPGQPGLPGSKGEPGYGLPGPPGLSGVPGAKGLPGPKGDPGFPGNPGAPGRS
GFDGSFGPKGEPGIPGIPGARGPPGPPSIGSLGEPGPTGPPGPVGSPGYPGQNGQKGDPG
PPGLDIPGLPGDRGNPGLPGSPGSIGPPGPPGGPGRDGLPGLPGQKGDTGLVGPPGPSGG
PGGPGGLGAPGPKGEPGFPGRDGGPGGPGVKGERGDPGVAGPPGTIVTSQATKGTKGEPG
LPGAPGFPGQKGISGLPGDSGLPGGDGRPGLPGPAGPKGDSGFPGTPGVPGGPGAKGSMG
EMGFPGPSGQKGLPGQSGRPGSPGQPGSPGYPGTKGDPGSTGVGPPGIPGPKGEPGQPGF
PGGPGLKGAPGAPGLQGLPGGPGTKGDPGLPGFQGPPGSPGPKGLDGGPGGPGLNGAPGR
PGESGRPGSAGLPGEKGQPGRDGIPGPAGIKGEPGLPGYGGPGPSGLPGLPGAKGDPGLP
GPSGSPGFPGSKGEAGFPGNPGAPGNIGPPGPPGLALQGPKGLQGPPGPPGRAGPAGPEG
PRGPQGSGGVKGEKGIPGSPGQPGYGGQKGESGVPGFPGPSGLPGSPGLKGDIGLPGVPG
FPGPKGDSGLPGGSGLPGDPGDVGLPGLPGDPGIAPAPIVVKGEQGPPGPQGQGGPRGPP
GSPGREGLPGQPGNPGDPGPEGPPGFTGPAGRKGDPGPAGQPGQRGFQGPPGSDGPQGLP
GLPGTASAAHGFLITRHSQTTEVPYCPEGTGLIYDGYSLLYVQGNERAHGQDLGTAGSCL
RRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMTMSMAPITGEGIKPYISRCAVCEAP
AMVIAIHSQTIQIPACPSSWDTLWIGYSFMMHTSAGAEGSGQALASPGSCLEEFRSAPFI
ECHGRGTCNYYGNSYSFWLATVEHSEMFRKPQSETLKAGNLGTRVSRCVVCMKKT
NT seq 5028 nt   +upstreamnt  +downstreamnt
atgaagagttcggctgttcccctgctcttcgccctcacactcagcgtcgcgctgcggctc
acggactctgcggcgtgtcaaggatgtgcaggatcaaaatgtgactgcagaggagtgaag
ggagacaagggtgaacgtggttttccaggtctgactggacaacctggagttccaggattc
cctggacctgaggggcccattggccccagaggggagaagggcagtgaggggcctcatgga
ctttctggtccaaaaggaattaggggaccttcaggattaccaggattcccaggaacgcca
ggacttcctggtctgcctggtcaggatggacctctaggacccagaggagttccaggatgc
aatggaactaagggtgaacgtggttttccaggagcaggaggaattccaggacagtctgga
ctgccgggcccaccaggtctgactggaccaaagggcgacccaggtgacatcatctccacc
aatcagtttggagaaaaaggagccgtggggttacctggtttaccaggggttcctggttct
ccaggatctccaggtcttccaggccctaccggtcctttaggacaaagaggctacgagggt
cgtccaggtcctcctggtcctccagggccaaaggggaacatgggtcagaacttccagggt
cctaaaggagagaagggtgaaccgggtcttcaaggacctccaggtcctccaggtcaggtt
ggagaacaaaacagaccttcaatcacagagatccagagaggagacaagggtgatccagga
cctccaggacccagaggtgaccaaggttatcctggttctcctgggccctctggtggagca
aagggggagaaaggagaagcaggagaagcaggaaaaagaggcaaaccaggcaaagatgga
gaccctggtcctccaggcttccctggaaccaaaggtgatggaggtttacctggttctcca
ggaagagacggagagagaggtcaaaaaggagaccgtggtttccaaggtccacctggactg
gtgattggtggacagactggaggtcaggttggtcccaaaggtgaacctggtttcccagga
tctcctggatataaaggagaacgaggacccccaggtctgacaggaccacctggaactcca
ggtctccctgcaatcggaggcagtggccagcctggatccccaggttaccctggagagcgg
ggtcagaagggagagtcaggtgcccaaggaatcacactaccaggtcctccaggtcgcaca
ggagctccaggtcctcagggtcctcagggaccacctggacctcctggcttttccactgga
caaaactgtgaacctggaaatcctggacgtccaggtgttcagggagaacgagggtacccc
ggagagtccggtcagaaaggtgagaagggtgacacctgcgtcaactgctatggaggaacc
aatcctattccaggacctcaaggacctccaggacaacctggacttccaggaatccctggc
agcccgggaacaaaaggtgacagaggttttccaggagctcctggtactatcggtcccgca
ggaaatcctggttttccaggtacccctggattaacaggagagaaaggagacccaggtgag
gccatcacagtgagcgggatcaggggggacaagggtgacactggcttccctgggcctcct
ggtttgcctggtctggatggacgaccaggtcgtgatggacagcctggtcttcctgggcct
aaaggagcttctggatccctgcttgttaaaggtgaaagggggactcctggtgagcccggt
gcagctggtattccaggggacagaggtcccccaggatctccaggctttggacctgcaggg
cctgtaggagagaagggtgtccaaggtgtctctggaagacctggagctccaggtctacct
ggtgctaaaggagccccaggtcaggcaactgcagccaaaggtacaccaggactcagagga
gaggatggagagcctggattgcctggaacaccaggtagtccaggttctcctgggcagccc
ggttttcctggtttgccaggggctaagggtgatcccggacttccaggaataggacttcca
ggacccccaggatcaaaaggattcccaggtattcctggacaaccgggagcttctggtgga
ccagggagaccaggaatagatggactacctgggcagcctggattacctggatccaagggt
gaacctggctatggacttcctggccctcctggtttatctggagtacctggagctaaaggt
ttgccaggaccaaagggagatcctggttttccaggcaatcctggtgcaccaggaagatcc
ggctttgatggctcctttggacccaaaggtgagcctggtatccccggtatccctggagct
cgtggtccacctggacctccctctatcggttccttgggcgagccaggtcctactggacct
ccaggcccagttggttcacccggttaccctggtcagaatgggcagaagggagaccctggc
cctccaggtctagatatcccaggtctaccaggggatagaggaaatccaggtcttccagga
tctccaggatcgattggaccaccaggacctccaggaggacctggacgagatggtctacct
gggctgccaggacagaaaggagacacaggacttgttggaccaccaggaccatcaggagga
cccggaggcccaggaggacttggagcacctggacctaaaggtgaaccaggattccccggc
agagatggaggaccaggtggtcctggtgtcaagggagagaggggtgaccctggtgttgca
ggaccacctggtaccattgtgacatcacaagccacaaagggtaccaaaggagagccagga
ctaccaggtgcaccaggctttcctggtcaaaaaggaatttctggtttgcctggagactct
gggttgccaggaggagatggtcgccctggacttccaggaccagcaggtcctaagggagat
tctggattcccaggaaccccaggtgtaccaggaggtcctggagcaaaaggaagcatggga
gaaatgggatttccagggccttcgggacagaagggtctacctggtcagtcaggacggcca
ggatccccaggacaaccaggatcacctggttatcccggaactaaaggtgatccaggctct
acaggagtgggaccaccaggaatacctggacctaagggtgagccaggccagccagggttc
ccaggaggtccaggactcaaaggagcacctggagcaccaggtcttcaaggtttacctgga
ggaccaggtaccaaaggtgatcctggtctcccaggatttcaaggtcctcctggtagtcca
ggtccgaagggtcttgatggtggccctggtggccctggtcttaatggagctcccggaaga
ccaggagaatctggccgtccaggatcagcagggttgccaggagagaaaggtcagcctggt
cgtgatggaattccaggaccagctggaatcaaaggagaaccaggtctgcctggttatggt
ggtcctggtccctctggtcttcctggtttaccaggtgctaagggagacccaggtcttcct
ggtccatccggatctcctggattccctggctccaaaggagaggcaggtttccctggtaac
ccaggtgctccaggaaatatcggaccccctgggccacctggactggctctgcagggccca
aaaggacttcaaggtccacctggtccacctggaagagcaggccccgctggcccagagggt
ccacgtggaccccaaggaagtggcggcgtcaaaggcgagaaaggaattcccggttctcca
gggcagccaggttatggaggacagaaaggagaaagtggagttccaggatttcctgggccc
tctggtctcccaggttctcctggtcttaagggagacattggtcttcctggcgttcctgga
tttcctggaccaaagggagattccggcctgcccggtggaagtggtcttccaggagaccct
ggagatgttggacttcctggactccctggtgaccccggtattgccccagctccaatagtt
gttaagggtgaacaaggtcctcctggtcctcagggtcaaggtggtcctcgtggaccacct
ggttctcctggacgtgaaggactcccaggtcaacccggtaaccctggtgacccaggacct
gagggtcctcctggattcactggtccagctggtagaaagggagatccaggacctgctggt
caacctggtcagcgaggtttccaaggtcctcctggttctgatggtccgcagggtcttcct
ggtctcccaggaactgcctcagcagcccatggattcctcatcaccagacacagccagacc
actgaagttccctattgtcctgaaggaacaggcctcatctatgacggatactccctgctg
tacgtgcagggcaacgagagagcacacggacaagacctgggaactgctggcagctgtcta
cgcaggttctccacaatgccctttatgttctgcaacatcaacaacgtctgcaactttgcc
tctcgcaacgactactcctactggctgtccacaccagaaccaatgacgatgtccatggcc
cccatcacaggagagggcatcaagccctacatcagcaggtgtgctgtgtgtgaagctcca
gccatggtcatcgcgatccacagtcagaccatccagattcccgcctgtccttccagctgg
gacactctatggatcggctactccttcatgatgcacaccagtgctggtgctgaaggctca
ggtcaggctttagcctctccaggttcctgcctggaggaattccgcagcgcccccttcatc
gagtgccacggcaggggaacctgcaactactacggaaactcctactccttctggctggcc
acggtggaacactctgagatgttcaggaagccacagtctgagactctgaaggcagggaac
ctgggaacgcgcgtcagccgctgtgtggtctgcatgaagaagacgtaa

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