Cynoglossus semilaevis (tongue sole): 103386192
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Entry
103386192 CDS
T04866
Symbol
col4a5
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04510
Focal adhesion
csem04512
ECM-receptor interaction
csem04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103386192 (col4a5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103386192 (col4a5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103386192 (col4a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csem04147
]
103386192 (col4a5)
00536 Glycosaminoglycan binding proteins [BR:
csem00536
]
103386192 (col4a5)
Exosome [BR:
csem04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103386192 (col4a5)
Glycosaminoglycan binding proteins [BR:
csem00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103386192 (col4a5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103386192
NCBI-ProteinID:
XP_008318574
UniProt:
A0A3P8UCZ0
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All DBs
Position
1:complement(23726499..23757692)
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AA seq
1675 aa
AA seq
DB search
MKSSAVPLLFALTLSVALRLTDSAACQGCAGSKCDCRGVKGDKGERGFPGLTGQPGVPGF
PGPEGPIGPRGEKGSEGPHGLSGPKGIRGPSGLPGFPGTPGLPGLPGQDGPLGPRGVPGC
NGTKGERGFPGAGGIPGQSGLPGPPGLTGPKGDPGDIISTNQFGEKGAVGLPGLPGVPGS
PGSPGLPGPTGPLGQRGYEGRPGPPGPPGPKGNMGQNFQGPKGEKGEPGLQGPPGPPGQV
GEQNRPSITEIQRGDKGDPGPPGPRGDQGYPGSPGPSGGAKGEKGEAGEAGKRGKPGKDG
DPGPPGFPGTKGDGGLPGSPGRDGERGQKGDRGFQGPPGLVIGGQTGGQVGPKGEPGFPG
SPGYKGERGPPGLTGPPGTPGLPAIGGSGQPGSPGYPGERGQKGESGAQGITLPGPPGRT
GAPGPQGPQGPPGPPGFSTGQNCEPGNPGRPGVQGERGYPGESGQKGEKGDTCVNCYGGT
NPIPGPQGPPGQPGLPGIPGSPGTKGDRGFPGAPGTIGPAGNPGFPGTPGLTGEKGDPGE
AITVSGIRGDKGDTGFPGPPGLPGLDGRPGRDGQPGLPGPKGASGSLLVKGERGTPGEPG
AAGIPGDRGPPGSPGFGPAGPVGEKGVQGVSGRPGAPGLPGAKGAPGQATAAKGTPGLRG
EDGEPGLPGTPGSPGSPGQPGFPGLPGAKGDPGLPGIGLPGPPGSKGFPGIPGQPGASGG
PGRPGIDGLPGQPGLPGSKGEPGYGLPGPPGLSGVPGAKGLPGPKGDPGFPGNPGAPGRS
GFDGSFGPKGEPGIPGIPGARGPPGPPSIGSLGEPGPTGPPGPVGSPGYPGQNGQKGDPG
PPGLDIPGLPGDRGNPGLPGSPGSIGPPGPPGGPGRDGLPGLPGQKGDTGLVGPPGPSGG
PGGPGGLGAPGPKGEPGFPGRDGGPGGPGVKGERGDPGVAGPPGTIVTSQATKGTKGEPG
LPGAPGFPGQKGISGLPGDSGLPGGDGRPGLPGPAGPKGDSGFPGTPGVPGGPGAKGSMG
EMGFPGPSGQKGLPGQSGRPGSPGQPGSPGYPGTKGDPGSTGVGPPGIPGPKGEPGQPGF
PGGPGLKGAPGAPGLQGLPGGPGTKGDPGLPGFQGPPGSPGPKGLDGGPGGPGLNGAPGR
PGESGRPGSAGLPGEKGQPGRDGIPGPAGIKGEPGLPGYGGPGPSGLPGLPGAKGDPGLP
GPSGSPGFPGSKGEAGFPGNPGAPGNIGPPGPPGLALQGPKGLQGPPGPPGRAGPAGPEG
PRGPQGSGGVKGEKGIPGSPGQPGYGGQKGESGVPGFPGPSGLPGSPGLKGDIGLPGVPG
FPGPKGDSGLPGGSGLPGDPGDVGLPGLPGDPGIAPAPIVVKGEQGPPGPQGQGGPRGPP
GSPGREGLPGQPGNPGDPGPEGPPGFTGPAGRKGDPGPAGQPGQRGFQGPPGSDGPQGLP
GLPGTASAAHGFLITRHSQTTEVPYCPEGTGLIYDGYSLLYVQGNERAHGQDLGTAGSCL
RRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMTMSMAPITGEGIKPYISRCAVCEAP
AMVIAIHSQTIQIPACPSSWDTLWIGYSFMMHTSAGAEGSGQALASPGSCLEEFRSAPFI
ECHGRGTCNYYGNSYSFWLATVEHSEMFRKPQSETLKAGNLGTRVSRCVVCMKKT
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atgaagagttcggctgttcccctgctcttcgccctcacactcagcgtcgcgctgcggctc
acggactctgcggcgtgtcaaggatgtgcaggatcaaaatgtgactgcagaggagtgaag
ggagacaagggtgaacgtggttttccaggtctgactggacaacctggagttccaggattc
cctggacctgaggggcccattggccccagaggggagaagggcagtgaggggcctcatgga
ctttctggtccaaaaggaattaggggaccttcaggattaccaggattcccaggaacgcca
ggacttcctggtctgcctggtcaggatggacctctaggacccagaggagttccaggatgc
aatggaactaagggtgaacgtggttttccaggagcaggaggaattccaggacagtctgga
ctgccgggcccaccaggtctgactggaccaaagggcgacccaggtgacatcatctccacc
aatcagtttggagaaaaaggagccgtggggttacctggtttaccaggggttcctggttct
ccaggatctccaggtcttccaggccctaccggtcctttaggacaaagaggctacgagggt
cgtccaggtcctcctggtcctccagggccaaaggggaacatgggtcagaacttccagggt
cctaaaggagagaagggtgaaccgggtcttcaaggacctccaggtcctccaggtcaggtt
ggagaacaaaacagaccttcaatcacagagatccagagaggagacaagggtgatccagga
cctccaggacccagaggtgaccaaggttatcctggttctcctgggccctctggtggagca
aagggggagaaaggagaagcaggagaagcaggaaaaagaggcaaaccaggcaaagatgga
gaccctggtcctccaggcttccctggaaccaaaggtgatggaggtttacctggttctcca
ggaagagacggagagagaggtcaaaaaggagaccgtggtttccaaggtccacctggactg
gtgattggtggacagactggaggtcaggttggtcccaaaggtgaacctggtttcccagga
tctcctggatataaaggagaacgaggacccccaggtctgacaggaccacctggaactcca
ggtctccctgcaatcggaggcagtggccagcctggatccccaggttaccctggagagcgg
ggtcagaagggagagtcaggtgcccaaggaatcacactaccaggtcctccaggtcgcaca
ggagctccaggtcctcagggtcctcagggaccacctggacctcctggcttttccactgga
caaaactgtgaacctggaaatcctggacgtccaggtgttcagggagaacgagggtacccc
ggagagtccggtcagaaaggtgagaagggtgacacctgcgtcaactgctatggaggaacc
aatcctattccaggacctcaaggacctccaggacaacctggacttccaggaatccctggc
agcccgggaacaaaaggtgacagaggttttccaggagctcctggtactatcggtcccgca
ggaaatcctggttttccaggtacccctggattaacaggagagaaaggagacccaggtgag
gccatcacagtgagcgggatcaggggggacaagggtgacactggcttccctgggcctcct
ggtttgcctggtctggatggacgaccaggtcgtgatggacagcctggtcttcctgggcct
aaaggagcttctggatccctgcttgttaaaggtgaaagggggactcctggtgagcccggt
gcagctggtattccaggggacagaggtcccccaggatctccaggctttggacctgcaggg
cctgtaggagagaagggtgtccaaggtgtctctggaagacctggagctccaggtctacct
ggtgctaaaggagccccaggtcaggcaactgcagccaaaggtacaccaggactcagagga
gaggatggagagcctggattgcctggaacaccaggtagtccaggttctcctgggcagccc
ggttttcctggtttgccaggggctaagggtgatcccggacttccaggaataggacttcca
ggacccccaggatcaaaaggattcccaggtattcctggacaaccgggagcttctggtgga
ccagggagaccaggaatagatggactacctgggcagcctggattacctggatccaagggt
gaacctggctatggacttcctggccctcctggtttatctggagtacctggagctaaaggt
ttgccaggaccaaagggagatcctggttttccaggcaatcctggtgcaccaggaagatcc
ggctttgatggctcctttggacccaaaggtgagcctggtatccccggtatccctggagct
cgtggtccacctggacctccctctatcggttccttgggcgagccaggtcctactggacct
ccaggcccagttggttcacccggttaccctggtcagaatgggcagaagggagaccctggc
cctccaggtctagatatcccaggtctaccaggggatagaggaaatccaggtcttccagga
tctccaggatcgattggaccaccaggacctccaggaggacctggacgagatggtctacct
gggctgccaggacagaaaggagacacaggacttgttggaccaccaggaccatcaggagga
cccggaggcccaggaggacttggagcacctggacctaaaggtgaaccaggattccccggc
agagatggaggaccaggtggtcctggtgtcaagggagagaggggtgaccctggtgttgca
ggaccacctggtaccattgtgacatcacaagccacaaagggtaccaaaggagagccagga
ctaccaggtgcaccaggctttcctggtcaaaaaggaatttctggtttgcctggagactct
gggttgccaggaggagatggtcgccctggacttccaggaccagcaggtcctaagggagat
tctggattcccaggaaccccaggtgtaccaggaggtcctggagcaaaaggaagcatggga
gaaatgggatttccagggccttcgggacagaagggtctacctggtcagtcaggacggcca
ggatccccaggacaaccaggatcacctggttatcccggaactaaaggtgatccaggctct
acaggagtgggaccaccaggaatacctggacctaagggtgagccaggccagccagggttc
ccaggaggtccaggactcaaaggagcacctggagcaccaggtcttcaaggtttacctgga
ggaccaggtaccaaaggtgatcctggtctcccaggatttcaaggtcctcctggtagtcca
ggtccgaagggtcttgatggtggccctggtggccctggtcttaatggagctcccggaaga
ccaggagaatctggccgtccaggatcagcagggttgccaggagagaaaggtcagcctggt
cgtgatggaattccaggaccagctggaatcaaaggagaaccaggtctgcctggttatggt
ggtcctggtccctctggtcttcctggtttaccaggtgctaagggagacccaggtcttcct
ggtccatccggatctcctggattccctggctccaaaggagaggcaggtttccctggtaac
ccaggtgctccaggaaatatcggaccccctgggccacctggactggctctgcagggccca
aaaggacttcaaggtccacctggtccacctggaagagcaggccccgctggcccagagggt
ccacgtggaccccaaggaagtggcggcgtcaaaggcgagaaaggaattcccggttctcca
gggcagccaggttatggaggacagaaaggagaaagtggagttccaggatttcctgggccc
tctggtctcccaggttctcctggtcttaagggagacattggtcttcctggcgttcctgga
tttcctggaccaaagggagattccggcctgcccggtggaagtggtcttccaggagaccct
ggagatgttggacttcctggactccctggtgaccccggtattgccccagctccaatagtt
gttaagggtgaacaaggtcctcctggtcctcagggtcaaggtggtcctcgtggaccacct
ggttctcctggacgtgaaggactcccaggtcaacccggtaaccctggtgacccaggacct
gagggtcctcctggattcactggtccagctggtagaaagggagatccaggacctgctggt
caacctggtcagcgaggtttccaaggtcctcctggttctgatggtccgcagggtcttcct
ggtctcccaggaactgcctcagcagcccatggattcctcatcaccagacacagccagacc
actgaagttccctattgtcctgaaggaacaggcctcatctatgacggatactccctgctg
tacgtgcagggcaacgagagagcacacggacaagacctgggaactgctggcagctgtcta
cgcaggttctccacaatgccctttatgttctgcaacatcaacaacgtctgcaactttgcc
tctcgcaacgactactcctactggctgtccacaccagaaccaatgacgatgtccatggcc
cccatcacaggagagggcatcaagccctacatcagcaggtgtgctgtgtgtgaagctcca
gccatggtcatcgcgatccacagtcagaccatccagattcccgcctgtccttccagctgg
gacactctatggatcggctactccttcatgatgcacaccagtgctggtgctgaaggctca
ggtcaggctttagcctctccaggttcctgcctggaggaattccgcagcgcccccttcatc
gagtgccacggcaggggaacctgcaactactacggaaactcctactccttctggctggcc
acggtggaacactctgagatgttcaggaagccacagtctgagactctgaaggcagggaac
ctgggaacgcgcgtcagccgctgtgtggtctgcatgaagaagacgtaa
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integrated database retrieval system