Cynoglossus semilaevis (tongue sole): 103386378 Help Entry 103386378         CDS       T04866                                  Name (RefSeq) collagen alpha-1(II) chain   KO K19719   collagen type II alpha Organism csem  Cynoglossus semilaevis (tongue sole) Pathway csem04510   Focal adhesion csem04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:csem00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     103386378  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     103386378  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:csem00536]     103386378 Glycosaminoglycan binding proteins [BR:csem00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    103386378 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  103386378 NCBI-ProteinID:  XP_008318831 LinkDB All DBs Position 11:12262611..12297725 Genome browser AA seq 1419 aa AA seqDB search MFSLMDSRTVLLLIASHVCLLAVVRCQDDRVPGAKGQKGEPGDITDVVGPRGPHGPMGPP GEQGPRGSRGDKGEKGSPGPRGRDGEPGTPGNPGPPGPPGPNGPPGLGGNFAAQMAGGFD EKSGGAQMGVMQGPMGPMGPRGPPGPSGSPGPQGFQGNPGEAGEPGQSGPMGPRGPSGPP GKPGEDGEAGKPGKSGERGPTGPQGARGFPGTPGLPGIKGHRGYSGLDGAKGETGAVGSK GESGAPGDNGAPGPMGPRGLPGERGRPGPSGAAGARGNDGLSGPAGPPGPLGPSGAPGFP GSPGAKGEAGPTGARGPEGAQGPRGESGTPGSPGPSGASGNPGTDGIPGSKGSAGGHGIA GAPGFPGPRGPPGPQGATGPLGPKGTSGDPGIAGFKGEAGPKGEIGPAGTQGQPGPQGEE GKRGPRGEPGSAGPLGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGASGPKGANGDP GRPGEPGLPGARGLTGSPGDAGPQGKVGPSGGSGEDGRPGPPGPQGARGQPGVMGFPGPK GASGEAGKAGEKGLAGAPGLRGLPGKDGETGPAGPPGPSGSAGERGEQGQPGPSGFQGLP GPPGPPGEGGKPGDQGVPGEGGAAGATGPRGERGFPGERGPAGTQGLQGPRGLPGTPGTD GPKGAIGPAGAGGSQGPPGLQGMPGERGGAGIPGPKGDRGDLGEKGPEGAAGKDGGRGLT GPIGPSGPSGPNGEKGESGPAGPSGAPGTRGAPGDRGETGPPGPVGFAGPPGADGQPGIK GEQGETGQKGDAGAPGPQGPSGAPGPAGPTGVFGPKGARGAQGPSGATGFPGAAGRVGPP GANGNPGPAGSAGPPGKDGPKGVRGDGGPPGRQGDAGLRGPAGTPGEKGDAGEDGPPGPP GPSGPSGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGGPGGSGDRGPPGPVGPPGLT GPAGEPGREGTPGSDGPPGRDGSAGIKGDRGNTGPAGAPGAPGAPGASGPVGPTGKQGDR GESGAQGPSGPSGPAGARGMPGPQGPRGDKGEGGESGERGQKGHRGFTGLQGLPGPPGQA GDQGATGPSGPSGQRGPPGPVGPSGKDGSNGLPGPIGPPGPRGRSGESGPAGPPGTPGPP GPPGPPGPGIDMSAFAGLGQTEKSPDPLRYMRADQAGGNLRQHDAEVDATIKSLNNQIEN IRSPEGSRKNPARTCRDLKLCHPDWKSGEYWIDPNQGCTVDAIKVFCNMETGESCVNPKP AGIPRKNWWSSKSKERKHVWFAETMNGGFQFSYGDDSLAPNTAAIQMTFLRLLSTEASQN LTYHCKNSVAYMDDSTGNLKKAVLLQGSNDVEIRAEGNSRFTYSVMEDGCTRHTGQWSKT VMEYRSQKTSRLPIVDIAPMDIGGADQEFGVDVGPVCFL NT seq 4260 nt NT seq  +upstreamnt  +downstreamnt atgttcagcttaatggattccaggactgtactgctgcttatagcaagccacgtctgtcta ttagccgttgtgagatgtcaggacgaccgagtaccaggagctaagggtcagaaaggtgaa cctggagacatcactgatgttgtaggaccaagaggaccacatggaccaatgggcccacca ggagagcaaggaccccgtggatcaagaggagataagggagagaagggaagccctggtccc cgtggcagagacggggaacctggaacacctggaaaccccggcccacctggacctccagga ccaaatggaccccctggccttggaggaaactttgctgctcagatggctggcggatttgac gagaagtctggcggcgcacagatgggtgtgatgcaaggaccaatgggcccgatgggaccc agaggaccacctggcccctctggatcacctggtccacaaggtttccagggcaacccagga gaggcaggagagcccggacaatctggccccatgggaccccgtggcccctctggacctcct gggaaacctggagaagacggtgaagcaggaaaacctggaaaatcaggcgagcgcggacct acaggacctcagggagctcgtggattcccaggaactcctggcctgcctggcatcaaggga cacagaggatattcaggtcttgatggtgcaaagggagagactggagctgtcggatcaaag ggtgaatctggtgcccctggagataacggtgcccccggacctatgggacctcgtggtctg cctggtgagagaggccgtcctggacctagtggagctgcaggcgctcgtggtaatgacggt ctttcaggacctgccggtcccccgggcccgctcggtccttctggagctcctggtttccct gggtcccctggtgcaaagggagaagctggacctactggtgctcgtggacctgaaggtgct caaggacctcggggagagtctggaacccctggatcacctggacccagtggtgcttctgga aaccctggaactgatggaatccctggatctaaaggatcagctggtggtcatggtattgct ggtgctcctggtttccctggaccacgtggacctcctgggccacagggggcaactggacca ctcggccccaaaggaacatccggagacccaggtattgcaggattcaagggagaggctgga cctaaaggagaaattggaccagctggaactcagggacaacctggtccccaaggagaagag ggtaagagagggccaagaggtgaaccaggttctgctggaccactcggtccccccggagag agaggcgcaccaggaaaccgtggtttcccaggtcaggatggtttggctggacccaaggga gcccccggtgagcgtggaccttctggagccagcggccctaagggggccaacggtgaccct ggtcgtcctggagagcctggtctgcctggtgccaggggtttgaccggaagccctggtgac gctggtcctcaggggaaagttggaccttctggaggctccggtgaagacggacgtcccggc ccacctggtccacagggagcccgtggacagcctggtgtcatgggattccctggacccaaa ggagcatctggtgaagctggcaaagctggagagaagggattggctggagctcctggactg agaggtcttcccggcaaagatggagaaaccggccctgctggacctcctggaccttctggt tctgccggagagagaggagaacaaggacaacctggaccctcaggcttccagggtcttcct ggacctcctggccccccaggtgagggaggcaaacctggagaccagggtgtacctggagag ggtggagctgccggtgctactggacccagaggagagcgtggtttccctggagagagagga cctgccggtactcagggtcttcagggacccagaggtctgcctggaacccccggaactgat ggacctaagggagctatcggacctgctggtgctggtggatctcagggacctcctggtctg cagggaatgcctggagagagaggaggcgctggaattccaggacctaaaggagacagaggt gatcttggagagaaaggacctgagggagcggctggtaaagacggcggcagaggtctgact ggtccaattggtccttccggtccatctggtcccaacggtgagaagggtgaatctggacct gctggaccttctggggctcctggtactcgcggtgcacctggtgacaggggtgagacaggg ccaccaggacctgttggatttgccggaccccctggagccgacggtcaacctggaatcaaa ggagagcagggagaaactggtcagaagggagacgccggggcccccggacctcaagggcca tctggtgcccctggacctgcaggtcctacaggtgtgtttggacccaaaggagctcgtgga gctcagggaccatctggtgccaccggattcccaggagctgctggtcgtgtcggtccacct ggtgccaatggtaaccctggacctgctggttccgctggtccccccgggaaagatggaccc aaaggtgtgaggggcgacggtggacctccaggcagacagggtgacgctggtctccgcggt cccgctggcacccctggcgaaaagggagatgccggagaggatggtcctcctggtcccccc ggtccctctggtccttcaggtctggctggtcaacgtggtatcgtaggtctacctggacag cgtggagagagaggattccctggactgcctggaccctctggtgagcctggaaagcaggga ggacccggtggttctggagaccgtggaccccctggccctgtcggaccacctggactcaca ggacctgctggagagcctggcagagagggcacccctggatctgatggaccccctggtaga gatggttctgctggaatcaagggtgatcgtggcaacaccggtcctgctggtgctcctggt gctccaggtgcccctggtgcttctggtcccgttggtcccactggaaaacaaggagacaga ggagagtctggcgcacaaggaccttctggaccttcaggacctgccggggccagaggaatg cctggacctcaaggacctcgtggtgacaaaggtgagggtggagagtctggtgagagggga cagaagggacacagaggcttcactggtctgcagggtctgcccggacctccaggtcaagct ggagaccagggagcaactggaccttctggaccttctggacagagaggaccacctggacca gttggaccttctggaaaagacggttctaacggtctgcccggacccatcggaccacctgga cctcgtggtcgctcaggagagtctggtcctgctggtcctccaggaaccccaggacccccc ggtcctcctggtccccctggccctggcattgacatgtctgccttcgctggcctgggtcag actgagaagtctcctgatcccctcagatacatgagagcggatcaagccggcggaaacctg cgtcagcacgacgccgaggttgacgccaccatcaaatccctgaacaaccagattgagaac atccgcagtccggagggatcgaggaagaaccccgcccgcacctgcagggacttgaagctc tgtcatcctgactggaagagtggagagtattggattgatcccaaccagggttgcaccgtc gacgctatcaaggtcttctgcaacatggagacgggcgagtcctgcgtcaaccccaagcct gccggcatccctcgcaagaactggtggtccagcaagagcaaggagcgcaagcacgtttgg ttcgcagaaacaatgaatggaggattccaattcagctacggcgacgacagcctggcgccc aacaccgccgccattcagatgaccttcctgagactgctgtccaccgaggcctcgcagaac ctcacctaccactgtaagaacagcgtggcctacatggacgactccacggggaacctgaag aaggccgtgctgctgcagggctccaacgacgtggaaatcagagccgaaggcaacagccgc ttcacttacagcgtaatggaggacggctgcacgagacacactggccagtggagcaagaca gtgatggagtaccgctcacagaagacctctcgtctacccatcgtggacattgcccccatg gatatcggtggcgcggaccaggagtttggagttgatgtcgggccagtctgcttcttgtaa

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