Cynoglossus semilaevis (tongue sole): 103386407
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Entry
103386407 CDS
T04866
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial isoform X1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem00260
Glycine, serine and threonine metabolism
csem00630
Glyoxylate and dicarboxylate metabolism
csem00670
One carbon pool by folate
csem01100
Metabolic pathways
csem01200
Carbon metabolism
csem01230
Biosynthesis of amino acids
csem01240
Biosynthesis of cofactors
csem04981
Folate transport and metabolism
Module
csem_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
103386407 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
103386407 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
103386407 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
103386407 (shmt2)
Enzymes [BR:
csem01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
103386407 (shmt2)
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
103386407
NCBI-ProteinID:
XP_008318875
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Position
11:12906493..12933777
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AA seq
342 aa
AA seq
DB search
MGLDLPDGGHLTHGYMSDVKRISATSIYFESMPYKLSPATGLIDYDQMELTAKLFRPRLI
IAGTSAYARLIDYARIKKLCTDINAYMLADMAHISGLVAAGAVSSPFEHADMVTSTTHKS
LRGARAGLIFYRKGVRSVDKKGKQIMYDLEDRVNFSVFPSLQGGPHNHAIAGVAVALRQA
NSPMFKEYIDQVLKNSKAMAAALLSKGYTLVSGGTDNHLVLVDLRPKGIDGARAERVLEL
VSITANKNTCPGDKSALTPGGLRLGAPALTSRQFKEADFVRVVEFMDEGFKIALDVKKKT
GKLQDFKNFLLQDQETVARIAELRQRVEAFARPFPMPGFLDH
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgggcctggacctgcctgatggaggacatctgacacatggctacatgtctgacgtaaaa
aggatctcagcgacctcaatctattttgagtccatgccctacaaactaagtcctgcaaca
ggactcatagattacgaccagatggagttgacggccaagctgttccggcccaggctcatc
atcgctggcaccagtgcatatgcccgcctcattgactacgcccgtatcaagaagttgtgc
actgacatcaacgcgtacatgcttgcagacatggctcatatcagtgggctggtggcagcc
ggtgccgtctcctctccctttgaacatgctgacatggtcacctccaccactcacaaatcc
ctgcgcggagccagggctggcctcatcttctaccgtaaaggtgttcgctcagtggacaag
aaggggaagcagatcatgtacgaccttgaggacagggtcaacttctctgtgtttccctcg
ctgcagggtggaccgcataaccacgccatcgctggtgtggctgtggcgctcagacaggcc
aattcgcccatgtttaaggagtacatcgaccaagtgctgaagaactccaaggctatggct
gcagctctgcttagcaaaggctacacactggtgtcagggggaaccgacaaccacctggtc
ctcgtagacctacggcctaagggcattgacggagctcgggccgaaagggtgctggagctg
gtgtccatcactgccaataagaacacctgccctggggacaagagcgccctgactcctggt
ggcctcaggctaggtgctcctgccctgacctccagacagttcaaagaggcggacttcgtg
cgggtcgtggagttcatggacgagggattcaagattgcgttggatgtcaagaagaagaca
ggaaaactccaggacttcaagaatttcctccttcaggaccaagaaactgtggctcgcatc
gcagagctgcgtcagcgcgtcgaagcgttcgccagacccttccccatgccaggcttcctc
gatcattga
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