Cynoglossus semilaevis (tongue sole): 103386646
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Entry
103386646 CDS
T04866
Symbol
chd5
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csem03036
]
103386646 (chd5)
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103386646 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
103386646
NCBI-ProteinID:
XP_016892213
LinkDB
All DBs
Position
11:complement(17481045..17516199)
Genome browser
AA seq
2000 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFGDDMPADEDDEGERNNVPLTPLDSFFSDDDSLKQQKKKKPKKI
KEGKIPKVIKRKKEGLMEVRLDSDLEATSEVEERERPEIGSESESSMFGPMKKKKKKPKE
KKEKKPRKKKRDEEDDDDDDDDGSMKEPKSSSQLMQEWGLEDVQYGFTEDDYKTITNYKA
FSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGASAXAVAAAVAAAVETVTVA
QPASVSSSQPGSQLGPVKKAKTKEGKGPGVRKRSKSVKDVKKKGKPKKTKSKTGQSGKKK
KTSSSDEDFLEESDFDDISLHSASVFSDTLGAATKKKARRGRKKRKKEDGDGYETDHQDY
CEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDDEEEEEE
AAGEEEDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLK
GKVQKILXXXXXXXXXXXXLPAGPDGKPNDPLTKAPLKGRPEREFFVKWAGLSYWHCSWV
SELQLELYHTVMYRNYQRKNDMDEPPPYDYGSGEEELNSEKRKSKDPQYAVMEERFYRYG
IKPEWMIIHRVLNHSFDRDGDVHYLIKWRDLPYDQCTWEMDDFDIPEYDGHKASYWDHRE
QILGEDQRPLMSEKVQKLKEDHPKREVPPDAPIIDPTIKFEHQPWYINATGGTLHPYQLE
GLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWER
EFEMWAPDFYVVTYTGDKDSRAIIRENEFTFEDSAVKSGRKVFRMKKDTPIKFHVLLTSY
ELITIDQAILGSITWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEEL
FHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTEL
IVRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAGEA
PVLPNGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEFEGYK
YERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASADTVIIYDSDWNPHN
DIQAFSRAHRIGQNKKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSK
QELDDILKFGTEELFKDEMEAARTMGDTKDGEEGSVIHYDDDAISKLLDRSQDATEDTEI
QNMNEYLSSFKVAQYVVKEEDGEEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARN
LGKGKRIRKQVNYNDTTQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQL
KNEKDKPLPPLLARVGGSIEVLGFNARQRKAFVNAIMRWGMPPQDAFNSHWLVRDLRGKS
EREFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHV
NGKLSSPDLIPIGMELKKLTESVSSDPNTPVPASPIMMQPGTPAPPEKNESLLGSSEDKE
MTEQDNKKASEQEASSSELASAGEKAADSEESKGVSEERSGDERDRTQSPSTKTEPSANA
KESALKQTELSPSRTSPKMEFGREAEKPSDKGDPESSLGKNEDKENKPDDVKCDEALEGR
LNGDKDTLDEMDETRKEEKNGYKAKFMFNIADGGFTELHTLWQTEERAALSSGKMLDIWH
RRHDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEIHKGNYLEMKNKFLARRFKLLE
QALVIEEQLRRAAYLNMTQDPTHPAMALNTRFAEVECLAESHQHLSKESLAGNKPANAVL
HKVLNQLEELLSDMKADVTRLPNMLSRIPPVSARLQMSERSILSRLTSRGNEPPQQPFSQ
GGFGCSQMYGGSYGGGFRGHGGQPMVNYSQMPLGPYVSVSSNGPPPPTSHLDKKSLDSLR
DVVTPDLKSGKPSDVICIED
NT seq
6003 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtcgctgagtaatgaagacgagggacaggacgacatggattttggagacgac
atgccagcagatgaggatgatgaaggtgagcgcaacaacgttcccctcactcccctcgac
agcttcttctcggatgacgactctctcaagcaacaaaagaagaagaaacccaaaaagata
aaagaggggaaaatacccaaagttataaagaggaagaaggagggtctgatggaggtgcgg
ctcgacagtgacctggaggcaacttcagaggtggaggagcgggagcgtccagagataggc
tcagagagcgagagcagcatgtttggtcccatgaagaagaagaagaagaaaccaaaagag
aagaaagagaaaaagcccaggaagaagaagagagacgaggaagatgacgatgatgacgac
gatgatggaagcatgaaggagcctaagtcctccagtcagttgatgcaggaatggggcctt
gaagatgtccagtatggcttcacagaagacgactataaaaccatcaccaactacaaggct
ttcagccagttcctcaggcctctcatagcaaagaagaaccccaagatccccatgtcaaag
atgatgacagtgttaggggccaagtggcgggagttcagtgccaacaacccgttcaagggt
gcgtctgcannagctgtggctgctgctgtggccgccgctgtggaaacggttactgtggct
cagccggcgtccgtcagcagcagccagccgggctctcagctggggccagtgaaaaaagcc
aaaaccaaagaaggaaagggaccaggtgtcagaaagagaagcaagtctgtgaaagatgtg
aagaaaaagggaaagccgaagaagaccaaatcaaaaacaggccaaagtgggaagaagaag
aaaacatcctcgagcgacgaagacttcctggaggagtcggactttgatgacatcagcctt
cacagtgcctctgtgttctctgatacccttggggctgccactaagaaaaaggcccgacgt
gggcgcaaaaagaggaaaaaggaagacggcgacggctacgagacggatcatcaggactac
tgtgaggtttgccaacagggtggagagatcatcctgtgtgacacgtgtcccagagcgtac
cacctggtctgtctggacccggagctggagaaggctcctgaaggcaaatggagctgcccg
cactgtgagaaagagggaatccaatgggaggccaaagacgatgaggaggaggaggaggag
gctgcaggtgaggaggaggacgaccacatggagttctgcagggtgtgcaaggatggaggg
gagctgctgtgctgtgacacctgcccttcgtcttaccacatccactgcctcaacccgcca
ctgccggagatacccaatggagagtggttgtgtccacgatgcatgtgtcctcccttgaaa
ggaaaagttcagaagattctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactg
cccgcaggccctgacggcaaacccaatgatccgctgaccaaggccccgctcaaaggtcgc
ccagagagggagttctttgttaaatgggccggcctctcctactggcactgctcctgggtc
agcgagctgcagctggaattgtaccacacggtcatgtatcgaaattaccagcggaagaac
gacatggacgaacctccgccgtatgactacggctcaggagaggaagagctcaacagtgag
aagaggaagagcaaggacccccagtacgctgtgatggaggagcgcttctaccgctacggc
atcaaacctgagtggatgatcattcaccgagtgctcaaccacagttttgatagggatggt
gatgtgcattacctgatcaagtggagagacctgccctatgaccagtgcacgtgggaaatg
gatgatttcgacatcccagaatatgatggtcacaaagcctcttactgggaccacagagag
caaattttaggtgaggaccagcgccccctgatgtctgaaaaagtacagaaactcaaagag
gaccatccaaaacgggaagttcctcctgatgctcccatcattgatccaaccatcaagttt
gagcatcagccttggtacataaatgccactggagggacactgcacccgtaccagctggag
ggtctgaactggctgcggttttcgtgggctcagggcacagacaccatcctcgccgatgaa
atgggcctgggaaagactgtgcaaacgatagtctttctctactcactttacaaagagggt
cactccaagggacccttcttggttagtgcccccctctccaccatcatcaattgggaaagg
gaatttgaaatgtgggctccagatttttacgtggtgacttacaccggagacaaagacagc
agggcaatcatcagggagaacgagttcactttcgaagacagtgctgtcaaatctggacgc
aaagtgtttcgtatgaagaaggacactccaatcaagttccatgtgctgttgacatcttat
gagctgataactatagatcaagccatcctgggttccattacctgggcctgcctggtggtg
gacgaggcccacagattgaagaacaaccagtcaaagtttttcagaattctcaatgggtat
aaaatctactacaaactgctgctgactggaactcctctgcagaacaacctggaggagctg
ttccacctgctcaactttctcactccagaaagattcaacaacctggaaggcttccttgaa
gagtttgctgatatctccaaggaggaccagatcaagaagctccatgacctgcttgggcca
cacatgttgaggaggctgaaagctgatgtcttcaaaaacatgcccgcaaagacggagctg
atcgtcagggtggagctcagtcccatgcaaaagaaatattacaagtttattctgacgcgg
aacttcgaggctctgaactccaaaggtggaggaaaccaagtttctctgctcaacattatg
atggacctgaagaagtgttgcaaccatccctacctgttccccgtggccgctggggaggct
cctgtgttacccaacggttcttatgatggaaacttactggtgaagtcctcaggaaaactg
acgctgcttcagaaaatgctgaaaaaactcaaggatgaaggacacagagttctcattttc
tctcagatgacaaaaatgttggatctactcgaggattttttggagtttgagggttataaa
tatgaacgtatcgatggaggaatcactggtgggttgagacaagaggccatcgaccgcttc
aacgcacctggagctcagcagttctgcttcctgctctccacacgagctggaggtctgggg
atcaatcttgcaagtgcagacactgtcatcatatacgactctgactggaatcctcacaac
gacattcaagcttttagcagagcccaccgcattggccagaacaagaaggtgatgatatac
cgttttgtgacacggggctcggtggaggagcgaatcactcaggtggccaagaggaagatg
atgctgacccatctggtggtgaggcctgggctgggctccaaaacgggctccatgtccaaa
caggaactagatgatatcctcaaatttggcacagaggagctcttcaaagatgaaatggag
gcagctcgaaccatgggcgacactaaagacggtgaagagggcagcgtgattcactatgat
gacgacgccatctcaaagctgctggaccgcagccaggacgctactgaagacacggagatt
cagaacatgaacgagtacctgagttcttttaaggtggcccagtatgtggtgaaagaagag
gatggagaggaagaggtggagagagagatcatcaagcaggaggagaacgtggatccggac
tactgggagaaactgctccgtcaccactacgagcagcaacaggaggatttagctcgaaac
ctggggaaaggcaaacgcatcagaaagcaggtcaattacaacgacacgacccaggaagat
caagagtggcaggatgatctttcagacaatcagtcggagtactccgtggggtccgaggat
gaggacgaagatttcgaggagaggcccgaaggaggacgcagacagtctcgacgccagctg
aagaatgagaaagataaacctctgccacctttactggcacgtgtaggcggcagtattgag
gtcctggggttcaacgcccgacagaggaaagcctttgtcaatgccatcatgcgctggggc
atgcctcctcaggatgccttcaattcccactggctggtccgagacctgagagggaaaagt
gaacgtgagttcagggcttatgtgtctctgttcatgcgacatctgtgtgagcccggggcc
gatggagcagagaccttcgctgatggagttccacgagagggattgtcccgtcagcatgtt
ctcaccaggatcggagtcatgtccctcgtcaggaaaaaggtgcaagagtttgaacatgtg
aatggaaaactgagttctccagatctgattcccatcggaatggagttgaagaaactgaca
gaaagtgtgtcctctgatcccaacacccccgtaccagccagtcccattatgatgcagccc
ggcaccccagcccctccagagaagaatgagtctctcctgggttcttctgaggacaaagag
atgacagagcaagataataagaaagcgtccgagcaggaagcttccagttcggagctggca
tctgcaggagagaaggcagctgacagtgaagagagcaagggcgtctcagaggagagaagt
ggagatgagagggacagaacccagtcaccctccacaaagacagagccatctgccaacgca
aaagagtctgctttgaaacagacagagctgtcacccagtcgaacctcacctaaaatggag
tttggaagagaagcggagaagccctcagataaaggagatcctgagtcttctctggggaaa
aatgaagacaaggaaaataagccagatgatgtgaagtgcgatgaggcgttagaaggtcgg
ttgaatggcgacaaagacactctggatgaaatggacgagacaaggaaggaagagaaaaat
ggatacaaggccaagttcatgtttaatatcgcagatggaggttttacagagctccacacc
ctttggcaaactgaagagcgagctgctctgtcttctggaaagatgcttgacatctggcat
cggcgccatgactattggctgttggctggcattgttacacatggctacgctcgctggcag
gacatccagaacgacccgcgttacgctattctgaatgagccttttaagactgagatccac
aagggcaactatctggagatgaagaacaagttcctggctcgtcgatttaagctgttggaa
caggctctggtgattgaagagcagctgaggagagcagcttacctgaatatgacccaggac
cccactcacccggcaatggctctcaacactcgctttgccgaagtggaatgtttggcagag
tcccatcagcatctgtccaaagagtctctggccgggaacaaacctgccaacgcagtgctg
cacaaagtgttgaaccagctggaggagctgctgagcgacatgaaggcagacgtcacacgt
ctgcccaacatgctgtccaggatcccaccggtgtcggcacgactgcagatgtcggagcgg
agcatcctgagccgtctgaccagtcgagggaatgagcctccgcagcagcccttcagccag
ggcgggtttggctgctcacagatgtacggcggcagctatggcggtggattcagaggacat
ggagggcagcccatggtcaactacagtcagatgcctctcggaccctacgtcagcgtttct
tccaatggtcccccacctcctacaagccatctggacaagaagtcattggactccttgaga
gatgtggtcacacctgacctcaagtcaggtaaacctagtgatgtcatctgtatcgaggac
tag
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integrated database retrieval system
