Cynoglossus semilaevis (tongue sole): 103386706
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Entry
103386706 CDS
T04866
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103386706 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csem03021
]
103386706 (smarcd1)
03036 Chromosome and associated proteins [BR:
csem03036
]
103386706 (smarcd1)
Transcription machinery [BR:
csem03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103386706 (smarcd1)
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103386706 (smarcd1)
PBAF complex
103386706 (smarcd1)
GBAF(ncBAF) complex
103386706 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
103386706
NCBI-ProteinID:
XP_008319327
LinkDB
All DBs
Position
11:complement(18183507..18194081)
Genome browser
AA seq
516 aa
AA seq
DB search
MAARGGFQSAPSGGGSGGMGPGPPVPGPGPGMGPGTPTGRMGPSPGAQNHMYRSPMPGPG
YPRPGMPPSSRMTPQGPSMGPPGYGSSPVSRPGMPGVMDPSRKRPAPQQIQQVQQQQQQN
RSQHTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQ
KRKLRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFK
SLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLD
PRLARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIP
QRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQAIA
GLXIAGLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDFKTMTDVVGNP
EEERRAEFYYQPWAQEAVCRYFYSKQRKNEGRKEGW
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggggggtttcagtcagcaccgagtggtggtggcagtggaggaatgggt
ccaggaccaccggtaccgggtccagggccaggcatggggcccggaactccaacaggcaga
atgggaccttcaccgggcgcgcagaaccacatgtaccgctccccgatgccagggcctgga
tacccgagaccaggcatgcctccatccagtcgtatgacccctcagggtccgtccatgggc
cctccaggatatggcagcagccctgtgtctcgccctgggatgcctggtgtgatggaccca
tctcgtaagaggccggcgccacagcagattcaacaagttcagcagcaacaacagcagaac
cgcagccagcacacaaagaagaagaagatggctgacaaaattctacctcagaggatcagg
gaactggtcccagagtctcaggcttacatggatctcctggcatttgaaaggaagctggat
cagaccatcatgcgcaaaaggctagacattcaggaggccctgaagaggcccattaagcaa
aagagaaagcttcggattttcatatccaacaccttcaacccggcgaagcctgatgctgag
gatggagaaggcactgttgcatcatgggagctacgtgttgaggggcgtctgttggaagat
accgctgtgtctaagtatgaggctaccaaacaaaaaaggaagttctcgtctttctttaag
tcccttgtgattgagttggacaaggacctatatggacctgataatcaccttgtggaatgg
cacagaactgccaccacccaggagactgatggctttcaggtgaagcggcccggtgacgtg
ggtgttcgctgcaccgtcctgctcatgctcgactaccagccccctcagttcaagttggac
ccccgtctggcccgtatgctaggtatccacacccagactagaccagtcataatccaggcc
ctgtggcagtacgtcaagacccacaaactccaggaccctcatgagcgcgagtttattaac
tgtgacaaatacctgcagcagatatttgagactcagcgaatgaagttttctgagatccct
cagcgtttgcatgctctcctgatgcccccagagcccatcatcataaaccatgtcatcagt
gtggaccccaacgaccagaagaagacggcctgttatgacattgatgtggaggtggacgac
acgttgaagacccagatgaactccttcctgctctccacagccagtcagcaggcaatagcc
ggacttganatagctggacttgacaacaagatccatgaaaccatcgagactattaaccag
ctgaagacccagagagaattcatgctgagttttgccagagatcctcagggttttatcaac
gactggctgcagtcgcagtgcagagacttcaagaccatgacagatgtggtaggaaaccca
gaagaagagcgaagagctgaattttattaccagccctgggctcaggaggccgtctgtcgc
tacttctactccaagcaaagaaagaatgaagggaggaaggaaggatggtag
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