Cynoglossus semilaevis (tongue sole): 103386903
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Entry
103386903 CDS
T04866
Symbol
pnpt1
Name
(RefSeq) LOW QUALITY PROTEIN: polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103386903 (pnpt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103386903 (pnpt1)
03016 Transfer RNA biogenesis [BR:
csem03016
]
103386903 (pnpt1)
Enzymes [BR:
csem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
103386903 (pnpt1)
Messenger RNA biogenesis [BR:
csem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
103386903 (pnpt1)
Transfer RNA biogenesis [BR:
csem03016
]
Prokaryotic type
tRNA degradation factors
103386903 (pnpt1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
F-112
Motif
Other DBs
NCBI-GeneID:
103386903
NCBI-ProteinID:
XP_008319550
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Position
12:885923..892492
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AA seq
776 aa
AA seq
DB search
MWSFCVYCHVKMRNFLHLGSSFSRLHVRSCHQSVYRRNTHPRGAAVELGETKLQISSGKL
ARFADGSAVVQLGDTSVMATAVSRTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRRELGT
TDREILTSRLIDRSIRPLFPSGYFYDTQIACNLLAVDGVNDPDVLAINAASAALSLSDIP
WNGPIGAVRVGFLDGQPLINPTRAEMSSSSLNLIVAGAPSSQVVMIEASAENMLXXDSCH
AVKVGVKHTQKIIQTIQQLAREQKVTKRTPVKIFTAPPAMVEQVRQLASQRVYAVLTDHT
HDKITRDEAINEVRLETEEVLKEKFPQAEPFEVMESFNVVVKDIFRSLVLNEYRRCDGRE
LTAVRNISCDVDLFQPLHGSALFQRGQTQVLCSVTFDSLESSVKADIITTALSGVKDKNF
MLHYEFPPYATNEIGRMGGMNRRELGHGALAEKALRPVIPTDFPFTIRVTAEVLESNGSS
SMASACGGSLALMDAGVPISSPVAGVAIGLISKTSEDKPTEIQDYRILTDILGIEDYLGD
MDFKLAGTAKGITALQADVKIPGLPLKVVMEAISEASVAKKEILGIMNSCIAQPRKSRKE
NGPVVENVRVPVSKRARFVGPGGYNLRRLQAKTGVTISQVDEETFSVFAPSPGAMHEAQE
FISDICKDDQEQQLEFGAVYTATITEMRDSGVMVKLYPNMSAVLLHNSQLDHKRIKHPSA
LGLEVGQQIQVKYFGRDPTDGRMRLSRKVLSSPAATLVKTISEKQSISMGSSSGDM
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcgttttgtgtgtattgtcatgtaaaaatgcggaattttctacacctcggttct
tcgttctcccgcctccatgtccgttcatgtcaccagagtgtttacagacggaacactcac
ccccggggggcggcagtggagctgggggagacaaaacttcaaatttcttcaggcaaactt
gccagattcgcagatggatctgctgtggtgcagctcggagacacctcagtgatggcgacg
gccgtcagcagaaccaaaccttctccgtctcagttcatgcctttggtggtggactacagg
cagaaagcagcagcagcaggtcgaatccccaccaactacctgaggcgagagctgggaact
acagaccgtgagatcctgaccagcagactgatagacagatcaattcgaccactttttcct
tccggttacttttatgacactcagatcgcttgtaacctcctggctgtcgatggcgtgaat
gaccctgatgttctggcgattaacgcagcctctgctgctctgtctctgtccgacatcccc
tggaatggacccataggtgccgttcgcgtgggtttcctggacggacagccactcatcaat
cccaccagagcagagatgagttccagttctctgaacctcatcgtggctggagctccgagc
agccaagtggtgatgattgaagcctcagctgagaacatgctttagtaggattcctgccat
gcagtgaaggtgggcgtcaaacacacacagaagatcatccaaaccatccagcagctggct
cgagaacagaaggtgaccaaacgcaccccagtcaagatcttcacggcgccccctgccatg
gtggagcaggtccgacaactggcatcacagagagtctacgctgtcctcacagaccacaca
cacgacaagatcaccagagatgaagccatcaatgaagttcgactggaaacagaagaggtt
ttaaaagaaaagtttcctcaggctgagccttttgaagtcatggagtccttcaacgtcgtg
gtcaaagacatcttccgcagcttggtgttaaatgagtacaggaggtgtgacgggagggaa
ctgactgccgtgaggaacatttcctgtgacgtggacctctttcagccgctccatggctcc
gcgctgttccagagaggacagacacaggttctgtgcagtgtcacctttgattccctggag
tccagtgtcaaagcagacatcatcaccacagctctgagcggtgtcaaagacaaaaacttc
atgcttcattatgaatttccgccgtacgcaaccaatgaaattggaaggatgggaggcatg
aacaggagggagctgggccacggggcgctggctgaaaaagctctgaggccagtcattccc
acagactttcctttcacgatcagagtcactgccgaggtgttggagtcaaacggctcctcc
tccatggcttcagcctgcggaggcagcctggcgctgatggatgcaggtgttcccatctcc
tctcctgtggctggagttgccatcggcctcatctccaagaccagtgaagacaaacccaca
gagatccaggattatagaatactaacagatattctgggaattgaggactacctcggagac
atggactttaaactggcaggaacagccaagggcatcactgctctacaggctgacgtgaag
atcccaggtctgcctctgaaggtggtgatggaggccattagtgaggcctcagtggctaaa
aaagagattctgggcatcatgaacagttgtatcgcacaaccacgaaaaagtcggaaggag
aacggacctgtcgttgaaaacgtgcgtgtgcctgtgtccaagcgagctcggttcgttggt
cctggagggtacaaccttcgcaggttacaggctaaaacaggtgtgacaataagtcaggtg
gacgaggagacgttctccgtgttcgctccgtcaccaggagccatgcacgaagctcaagag
ttcatcagtgacatctgtaaagatgaccaagaacagcagctggagtttggtgcagtttac
acagcaactatcactgaaatgagggacagcggagtgatggtgaaactttaccccaacatg
agtgcagtcctgctccataactcacagctggaccacaaacggatcaaacaccccagcgct
ctgggtttggaggtgggacagcagatacaggtcaaatactttggacgggacccgacggat
ggcaggatgagactttcacgaaaggttctcagttctcctgctgccactctggtcaagacc
atcagtgagaaacagagcatctccatgggttcgagcagcggcgacatgtga
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