Cynoglossus semilaevis (tongue sole): 103386992
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Entry
103386992 CDS
T04866
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X2
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
103386992
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csem04040
]
103386992
Ion channels [BR:
csem04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
103386992
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
BNR_3
Motif
Other DBs
NCBI-GeneID:
103386992
NCBI-ProteinID:
XP_008319672
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Position
12:complement(2212901..2329997)
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AA seq
1290 aa
AA seq
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MRTTGNVNGNGDDSLNGNGNLRQADSSILISRMEDVVIPFSSEVPCDNNGQRMWWAFLAS
SMVTFFGGLFIILLWRTLKYLWTVCCHCNIKNKEAQKVNNPANNQAADRTLKGPDEKEEA
PPISEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQNFY
KDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLG
LRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWEN
FQNSQSLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIEL
IGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNL
ELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCPDPDAEDASNIMRVI
SIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWREGDDAICLAELKAGFIAQSCLAQGLST
MLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTICELCYVKLKLLL
IAIEYKSEQRESRSRKRILINPGNHVKMQEGTLGFFIASDAKEVKRAFYYCKACHDDITD
PKRIKKCGCKRPKMSVYKRMKLACCFDCGRSERDCSCMSGSVRSNMDTLQRAYPLSSVSV
HDCATTLRASDGATTPGNSGSQKEAGVRFKADCNLVEDEHHPSTLSPKKKQRNGGMRNSP
NCSPKMMGRHDPLLIPGNEQIENMDMNVKRYDSTGMFHWCPSKDIEKVILTRSEASMTVL
SGHVVVCIFGDVTSALVGLRNLVMPLRASNFHYHELKHIVFVGSLEYLRREWETLHNFPK
VSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDASLQDKECILASLNIKSMQFDDS
IGVLQANSQGFTPPGMDRSSPDSSPVHGFVRQASVTTGSNIPIITELVNDSNVQFLDQDD
DDDPDTELYLTQPFACGTAFAISVLDSLMSATYFNDNILTLIRTLVTGGATPELEALLAE
ENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIY
RLRDAHLVVPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRTSLSHSSHSSHS
SSKKSSSVHSIPPSNRQNRSSKTRESRDKHNATRMNRMAPEKKWFTDEPDNAYPRNIQIK
PMSTHMANQVNQYKSTSSLIPPIREVEDEC
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgaggacaacaggcaacgtcaacggcaacggcgacgactctctcaacggcaacggcaac
ctgcggcaggcggactcgtcgatcttgatctccaggatggaggacgtggtgatccccttc
tcgtcggaggtgccatgcgacaacaacgggcagcgcatgtggtgggctttcctcgcctcc
tccatggtgacgttcttcgggggtctcttcatcatcctgctgtggaggaccctcaagtac
ctgtggaccgtgtgctgtcactgcaacatcaagaacaaggaggctcagaaggtgaacaat
ccggccaacaaccaggcagcagacaggacgttgaagggtcctgatgagaaggaggaggcg
ccgccaatcagtgaggtgggatggatgacgtcggtcaaagactgggccggggtcatgatc
tccgctcagaccctgacgggcagagttctggtggtgctggtcttcgccctcagcatcggg
gccctggggatatacttcatagactcctcagatcctatagaatcctgccagaacttctac
aaagacttcacgctacagatcgacatggccttcaacgtgttcttccttctatacttcggc
ctccggttcatagcagccaatgataagctgtggttctggctggaggtcaactctgtggtc
gacttcttcactgttccccccgtttttgtctccgtctacctgaacagaagctggcttggt
ttaagattcttgagagctctcagattgatacagttctctgaaatcttacagtttctgaat
atcctaaaaacaagcaattctatcaagctggtgaacctgtgctccatcttcatcagcaca
tggctcacagctgctggattcatacatctggtggaaaactcaggggatccttgggaaaac
ttccaaaattcccagtcactttcctactgggaatgtgtctacttgctgatggtgactatg
tccacagtgggctacggtgatgtctatgcaaaaaccaccctgggccgtctcttcatggtc
ttcttcatcctcggtggtttggccatgtttgccagctacgtccctgaaatcatagagtta
ataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggagaaagcacatt
gtggtctgtggtcacattaccctcgagagcgtctccaacttcctcaaagacttcctacac
aaggacagggatgatgtcaatgtagaaattgtttttcttcataatatttcccctaatctt
gagctggaagccttgttcaaacgtcattttacccaagtggagttttaccaggggtcagtt
ctcaacccccacgacctggccagagtgaagatcgagtcagcagacgcctgtctgattcta
gccaataaatattgtcctgatcctgatgctgaagatgcctccaacatcatgagggtgatt
tccatcaagaactaccatcccaagatcagaatcatcacacagatgcttcagtatcacaat
aaggcccatctgctgaacattccaagctggaactggagggagggtgatgacgccatctgc
ctggccgagctgaaggcgggcttcatcgcccagagctgtctggcccagggtctgtccacc
atgctggccaacctcttctccatgaggtccttcatcgagattgaggaggacacgtggcag
aagtattaccttgaaggagtggctaatgagatgtacacagagtacttgtccagtgccttt
gtgggcctctccttccccaccatctgtgaattgtgttacgtgaagttgaagcttctgctc
atcgccatcgagtacaaatctgagcagagagagagcagaagcagaaagcgcatcctcatc
aaccccgggaaccacgtcaagatgcaggagggaactctgggattctttatcgccagtgac
gccaaagaagtgaagagagctttttactactgcaaagcttgtcacgatgacatcacagac
cctaagaggatcaaaaagtgcggctgcaaacgacccaagatgtccgtctacaaacgaatg
aaactggcatgttgttttgattgcggccgttcagagcgagactgctcatgcatgtcaggc
agtgtacgtagtaacatggacaccctgcagagggcctacccactgtcctctgtctctgtt
catgattgcgcaaccactttacgtgcctcagatggcgctacaacaccagggaacagtggg
agtcaaaaagaggctggtgttcggttcaaagctgattgcaacttagtcgaagacgaacat
catccgtccacactgtcgcccaagaaaaagcaacgcaacggagggatgaggaactcgcca
aattgttcgcccaagatgatgggtcgacacgaccctctgctgattcctggtaatgagcag
attgagaacatggacatgaacgtgaagaggtacgattccaccgggatgttccactggtgt
ccgtccaaggacatcgagaaggtcatcctgacacgaagtgaagcctccatgacggtgctc
agcggccatgttgttgtctgtatattcggggacgtgacgtcagcgttggttggtctgagg
aacctggtgatgcctttgagggccagcaacttccactaccatgagctgaaacatatagtg
tttgtgggttcactggaatatctgcgcagagagtgggagacgctacacaacttccccaaa
gtctccatcttacctggcacgccgctaagtcgggcagatctgagggctgtgaacatcaac
ctctgcgacatgtgcgtaatcctgtcagccaatcagaacaatatcgacgacgcctcgctg
caggacaaagaatgcatcttagcatcgctcaacatcaagtctatgcagttcgacgacagc
atcggagtcttacaggccaattcacaaggcttcactcctccaggaatggaccggtcgtct
ccagacagcagtccagttcacggcttcgtgcgtcaggcgtctgtcaccacagggtccaac
atccccatcatcacagaactagtgaatgactcaaacgttcagttcctggaccaggatgac
gacgacgacccagacaccgagctgtacctcacccaacccttcgcctgtggcactgccttt
gccatcagtgttctggactcgttgatgagcgcgacctacttcaatgacaacatcctcaca
ctgattcggacactggtcacaggaggcgccaccccagaactggaggcgctcctggcggag
gagaacgccctgcgtggaggctacagcacgccacagacactggccaacagggacaggtgc
agggtggctcagctggccctctacgacggaccgtttgcagacttgggggatggaggctgc
tacggggatttgttctgcaaagcgctgaagacgtacaacatgctgtgcttcggaatctac
agattaagagacgctcacctcgtcgtacccagccagtgtacaaaacgttatgtcatcaca
aacccaccgtacgagtttgagctggttcccacagacctgatcttctgcctcatgcagttc
gaccacaacgcaggacagtccaggacaagtctgtcccactcgtcccactcctcccattcc
tccagtaaaaagagctcttccgtccactccatcccaccgtctaaccggcagaaccgcagc
agcaagacccgcgagtcccgtgacaaacacaatgcaacaaggatgaatagaatggcccca
gaaaagaaatggtttacagatgaaccggacaacgcctacccacgcaacatccagatcaag
cccatgagcactcacatggccaaccaagtcaaccaatacaaatccaccagtagtctgatt
ccaccaatcagagaagttgaagatgaatgctga
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