Cynoglossus semilaevis (tongue sole): 103387258
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Entry
103387258 CDS
T04866
Symbol
polr2a
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03020
RNA polymerase
csem03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103387258 (polr2a)
09124 Replication and repair
03420 Nucleotide excision repair
103387258 (polr2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csem03021
]
103387258 (polr2a)
03400 DNA repair and recombination proteins [BR:
csem03400
]
103387258 (polr2a)
Enzymes [BR:
csem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103387258 (polr2a)
Transcription machinery [BR:
csem03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
103387258 (polr2a)
DNA repair and recombination proteins [BR:
csem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
103387258 (polr2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_7
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
103387258
NCBI-ProteinID:
XP_008320032
UniProt:
A0A3P8UTQ2
LinkDB
All DBs
Position
1:complement(25612901..25623466)
Genome browser
AA seq
1965 aa
AA seq
DB search
MHGPPSGDSACPLRTIKRVQFGIISPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDPRQ
GVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFVTKIMKVLRCVCFFCSKLLVDSN
NVKIKDILVKSKGQPRKRLTHVYELCKGKNICEGGEEMDNKFGVEQQENEEDISKEKGHG
GCGRYQPRIRRTGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEEDIILGMDPKF
ARPEWMIVTVLPVPPLAVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQSGAAAHV
IAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDFS
ARTVITPDPNLQIDQVGVPRSIAANMTFPEIVTPFNIDRLQELVRRGNSQYPGAKYIIRD
NGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTF
RLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTL
TAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINV
IRTHSTHPDEEDSGQYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEMGH
DITRLFYSNIQTVVNNWLLIEGHSIGIGDSIADAKTYLDIQNTIKKAKQDVIEVIEKAHN
NELEPTHGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVAGSKGSKINIS
QVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMG
GREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDGTVRNSINQVVQLRYGEDGLAGENVE
FQNLVTIKPSHRAFEKKFRFDCTNDRALRRVLQEDVVKEVQTSAHVQSALEREFEKMKED
RENLRTIFPTGASKVVLPCNLARMIWNAQKIFRINPRTPTDLNPLRVVEGVKDLSKKLVI
VNGDDPLSRQAQQNATLLFNIHLRSTLCSKRMTEEFRLSTEAFDWLLGEIETKFNQSIAH
PGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKRPKTPSLTVF
LLGQAARDAERAKDILCRLEHTTLRKLTANTAIYYDPNPQNTVVTEDQEWVNVYYEMPDF
DVNRISPWLLRIELDRRHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIM
NSDENKFQDDEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQICKVYMHLPQTDNKKKIII
TEEGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALEREL
YHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGINRQDTGPLMKCSFEETVDVLMEA
SSHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGISVAGPTGMF
FGTMPSPMSGMSPAMTPWNTGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYS
PAWSPTPGSPGSPGPASPYIPSPGGAMSPNYSPTSPAYEPRSPGGYTPQSPGYSPTSPSY
SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
PTSPSYSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP
SYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSP
TSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPK
YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSPAISPDDSDEEN
NT seq
5898 nt
NT seq
+upstream
nt +downstream
nt
atgcacggaccgccctccggtgacagcgcatgcccattgcgcacgatcaagagagttcaa
ttcggcatcatcagcccagatgagcttaaacggatgtccgttacagaaggggggatcaag
taccccgaaacaacagaaggaggacgtcccaaactaggtggccttatggacccgagacag
ggtgtcattgaaagaacaggacggtgtcagacatgtgcagggaacatgacggagtgtccc
ggtcactttggacacatagaactggcaaagccagttttccatgtcggttttgtaacaaag
ataatgaaagttctccgatgtgtctgcttcttttgctccaagttattagtggattcaaac
aatgttaaaatcaaagatattttggtaaaatctaaagggcaaccccgaaagcgcttgaca
catgtctacgagctgtgcaaaggtaaaaatatatgtgaaggaggtgaagaaatggataac
aaatttggagttgagcagcaagagaatgaggaggacatcagcaaagagaagggtcatggt
ggctgtggacgctatcaaccaagaatcagacgcactggattagagctgtatgcagagtgg
aagcatgtgaatgaggattcacaggaaaagaaaatcctgctgagtcctgagcgtgtacat
gaaatcttcaagcgcatctctgatgaggaggacatcatcttgggcatggaccccaagttt
gccagacccgaatggatgatagttaccgtgctgcctgtacctccactggctgtgaggcct
gctgtagtgatgcagggatctgctcgcaatcaggacgacttgacccacaagcttgctgat
atcgttaagatcaacaaccaactgagaagaaatgaacagagtggtgcagcagctcatgtc
atagctgaagatgtgaagttgcttcaatttcacgtggccacaatggtggacaatgaattg
cctggccttccaagggccatgcaaaaatcaggtcgtcctctcaaatctttaaagcagcgg
ttaaagggaaaggaagggcgagttcgaggtaacctcatgggcaaacgtgtggacttctct
gcccgaactgtcatcaccccagacccaaatctgcagatcgatcaagtgggagtgccgcgg
tcaattgcagctaatatgactttcccagaaattgtcacaccctttaacattgacagactg
caagagctggtacggagaggcaacagtcagtatcctggggccaaatacattattcgtgac
aatggagacagaattgacctccgcttccatccaaaaccaagtgaccttcatttgcagatt
ggctacaaggttgaaagacacatgtgcgacggtgacattgtcatcttcaatcggcagcct
acactacataaaatgtctatgatgggacacagagttcggattcttccctggtccacattt
cgactgaacctgagtgtcactactccatacaatgctgactttgatggagatgagatgaac
ctccacttgcctcagtccctagagaccagggcagaaattcaggagctggccatggtgccc
cgtatgattgttacaccacagtccaacagacctgtcatgggtattgtgcaggacacactt
acagctgtgcgcaagttcaccaaaagagatgtcttcttagagaggggtgaagtcatgaac
ctcctcatgttcctgtccacctgggatgggaaagtgcctcagccggccatccttaaacca
cgtcctctgtggacgggcaagcagatcttcagtcttatcattcctggacacatcaacgtt
atccgaacccacagcacccaccctgacgaggaggacagcggtcaatacaagcacatctca
ccaggggacacaaaggttgttgtggagaacggtgaattgatcatgggaatcctgtgcaag
aagtctcttggaacgtcggctggctccctcgtccacatttcctacctagagatgggtcat
gacatcactagactcttctactccaacattcagactgtagtcaacaactggctgcttatt
gaaggtcattccattggtattggtgactcaattgctgatgccaaaacttaccttgacatt
cagaacaccatcaagaaagccaaacaggatgtgatagaagtcattgagaaagcccacaac
aacgagctggagccgactcatggtaacacactgaggcaaacgtttgagaaccaagtgaat
cgtatcctcaatgacgctcgtgacaaaacgggttcctctgcccaaaagtctctgtccgag
tacaacaacttcaagtccatggtggtggctggttcaaaaggttcaaagattaacatctca
caggttattgctgtggtggggcaacagaatgttgaaggtaaaagaattccctttggcttc
aaacatcgaacactgcctcacttcatcaaggacgactacggtcctgagagcagaggcttt
gtggagaactcgtacctggctggactgacacccacagagttcttcttccatgccatggga
ggcagagagggtctgattgatacagctgtcaagactgctgagacaggttacatccagcgt
cgtctgatcaagtccatggagtctgtaatggtcaagtacgatggcactgtgcgtaactcc
atcaaccaggtggtgcaactgcgctacggcgaggacggcctggccggagagaacgtagag
ttccaaaatctggtaacaatcaaaccatctcacagggcctttgaaaagaagttcagattt
gattgcactaatgaccgcgcattgcgacgggtgctgcaagaagacgtggtcaaagaagtg
cagacaagcgcccatgtgcagagtgccctggagagggaatttgagaagatgaaggaggac
agggagaacctgcggaccattttccccacaggcgccagcaaggtggtgctgccatgcaac
ctggccagaatgatctggaatgctcagaagatcttccgcattaatcctcgtaccccaaca
gacctgaatccactaagagttgtcgagggtgtcaaggatttgagtaagaagctggtgatt
gtaaatggtgatgacccactgagcaggcaggcgcaacagaatgccactctgctcttcaac
atacacctgcgctctacgctgtgctccaaacgcatgacagaggaattccgtctttccacc
gaagctttcgactggctccttggagagatagagaccaagttcaatcagtctattgcccac
cctggagaaatggtcggtgctctggctgctcagtccctgggagagccggccactcagatg
accctgaacactttccattacgccggtgtgtcagctaagaacgtaacccttggggtacca
cgtctgaaggagttgattaacatctccaagaggcccaaaactccctctctcaccgtcttc
ctgctgggtcaggcggcacgtgacgcagagagggccaaggacatcctctgtcgactggag
cacacgacactgcggaaattgacagccaacactgctatttactacgaccccaacccccag
aacacagtggtgactgaggaccaggagtgggtgaacgtctactatgaaatgcccgacttt
gatgtaaaccgcatttcaccctggctgctgcgtatcgagctggaccgcaggcacatgact
gaccgcaagctgaccatggagcagattgcagagaagatcaatgcaggtttcggagatgac
ctgaactgcatcttcaatgacgacaatgctgagaagcttgttctgagaatcagaataatg
aacagcgacgagaacaagtttcaagatgatgaagaggtggtggacaaaatggatgatgat
gttttcttgagatgcattgagtccaacatgctgacagacatgaccctacagggcattgag
cagatctgcaaggtgtacatgcatttgcctcagactgacaataagaagaagatcatcatc
acagaagaaggagagttcaaggccctgcaagagtggatccttgagacagacggagtgagt
ctgatgagagtactaagtgagaaggacgtagatcccgtcagaaccacctccaatgacatt
gtagagattttcacggtcttgggcattgaagctgtacgaaaggctctggagagggagttg
taccacgtcatatcctttgacggttcctacgtcaactaccgtcacttggctttgctctgt
gacacaatgacctgccgcggtcacctgatggccatcacgcgtcacggcatcaaccgtcaa
gacacagggccactgatgaagtgttcctttgaggagacggtggatgtactgatggaggcg
tcctcacatggtgaaagtgaccccatgaagggtgtgtctgagaacatcatgctcggacag
ctggctccagctggtaccggctgttttgatttgctcctggatgctgagaagtgtaaatat
ggaatggagattcccaccaacatacctggcatcagcgtggctggacccactggaatgttc
tttggcaccatgccaagccccatgagtggcatgtcacctgcaatgactccttggaacaca
ggagctacacctgcctacggtgcctggtctcctagtgttggaagcggcatgactcctgga
gctgcaggtttttctcccagtgcagcatcagatgcaagtggcttctctccaggttactcc
cctgcttggtctcccactcctgggtctccaggatctccaggacctgccagtccgtacatc
ccctctccaggtggagcaatgtcacccaactactcccccacctccccagcctacgaacct
cgctccccaggaggctacaccccacagagcccgggctactctcccacatccccttcttac
tccccaacttctccctcttactcaccaaccagccccaactacagtccaacctctccatca
tactcccccacctcacccagctactctccaacttctccttcttactcgcccacatcgcct
tcctattcgccaacgtctccatcctactcgcccacatcgccctcttactcccccacgtct
ccgtcctactctccaacatcacccagctacagcccgacgtcaccaagctacagcccaaca
tcacccagctactccccaacctcgccttcctactcccccacttcaccgtcatattctccc
acatctccttcctactcccccacgtcgccctcatattctcccacctctccttcctactca
cccactagtccaagctacagcccaacgtcacccaattacacgcccacttcccctagttat
tccccaacatcaccctcctactctccaacatcgccctcttactcccctacctcacccaac
tacaccccaaccagccccaactattctccgacctccccgtcttactccccaacgtctcca
tcctactctccctccagtccgcgttatacaccacaatcccccacctacacgcccagctca
ccctcttacagccccagctctccctcctactctcccacctcacccaaatacacaccgact
tcaccctcatacagcccaagctccccggagtacacaccaacctctccaaaatactcccca
acctctccaaagtactctcctacatcacccaagtactcacccacttctcccacttattct
ccaactacgccaaaatatagccccacctcccccacatactctccgacctccccaacctac
acccccaccagccccaaatactctcctacctccccaacgtactccccgacttcacccaag
tactcccccacatcgcccacatactcacccactagtcccaaaggctcaacctacagcccc
acctcccctggatatagccccacatcacccacatacagtccagccatcagcccagatgac
agtgatgaggagaactga
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integrated database retrieval system
