Cynoglossus semilaevis (tongue sole): 103387299
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Entry
103387299 CDS
T04866
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103387299 (hps1)
Membrane trafficking [BR:
csem04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
103387299 (hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
AraC_binding_2
Motif
Other DBs
NCBI-GeneID:
103387299
NCBI-ProteinID:
XP_008320096
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Position
12:complement(8148420..8155211)
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AA seq
686 aa
AA seq
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MRCLLIASESAEVLFHWTDPEFQQSIQQQYGSSQEDGHGLPAFEDSISTLFAPIIISCST
MVDRLGDGYTSFTTENNHIYALHQFDECLYIAVNGDGEEDEDVLRRKIYVMKKMIEVLFG
MVTLSSQLLRRELRPQDTEQRARLWKHLQGLLETYSHLRENDQSFLVEAVERLIHPTLCE
QCIEFLERRLVQQLNSSTEKAGEEVLHAFILVHTKLLAFYSSRNASTLATSDLLALIIVA
QNMYPSSVDLDDSSPEDVDSTSGSGPESFYTPEPSPTDRTSMSSDKPERGNTPVFEFMDP
DVQMAEDSLQALDVPAPDPSTPRRVFLEISSKDGLYAMMPHSMYCLPLWPGITLVLLTKV
RGCKQIPTSAVAMSIYKFLEAFTKLEKCLGEGQDSSAASRGQLAIHDIRSKLDKFIKALG
PSELQSAQLLNVWTEFKNRAFVRGGSGFNKDLLPWCTRMKTQLCGIYRQCFLSPCGPGDV
TQRLSSSLQERAQTMVQEKLMDWRDFLLVKSKRNITMVSYLEDFPGLIHFICVDRSTGQM
IAPSLTITERTTSELGKGPLAQFFKNKVWSLVSTTRCFLRKGYSTVTLRDGDFYFCYFLW
FENDTGYKLEAGDLPILPDDSAPIGMLAWDYYRKLQRYYSKSHQGEVVRCYELLTVHLGV
IPTEIILQHCRQLASKLWEPSRNPLL
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgcttactaatagccagtgagagtgcagaggtcctgttccactggaccgaccca
gaatttcagcagagcatccagcagcagtatggatcatctcaggaggacggacacgggctt
ccagcctttgaggacagcatcagcactctgtttgcccccatcattatctcctgcagcacc
atggtggacaggctgggtgacggctacacctccttcaccacagagaacaaccacatctac
gcccttcaccagtttgacgagtgtctctacattgctgtgaacggtgacggcgaggaggat
gaggatgttctgaggaggaagatctatgtgatgaagaaaatgatcgaggtgctgttcggc
atggtgaccctcagcagtcagctcctgagaagagaactccgtcctcaggacacagagcag
agagctcgattgtggaaacatctccagggtctgctggagacctacagccacctcagagag
aatgaccagagcttcttagtggaggcagtggagcggttgatccaccccacgctgtgtgag
cagtgcattgagttcttggagcgccgtttggtccagcagctcaacagcagcacggagaaa
gcgggagaggaagtgctgcacgccttcatcctggtacacaccaaactgctggccttctac
tccagccgcaatgcaagcacactggcgacctctgacctgctggcactcattatcgtggca
cagaacatgtatcccagcagtgtggacctggacgactccagtcctgaggatgttgacagt
acttcaggctccggtcctgaaagtttttacactccagagccgtcacctacagacaggacc
tccatgagttcagacaaaccagagagaggaaacacccctgtgtttgaattcatggacccg
gacgttcagatggctgaggacagtttacaagctctggacgttcctgctcctgatccctcg
acaccgcgccgagtcttcttagagatttccagcaaagacgggctttatgccatgatgcct
cactccatgtactgtctgcccctgtggcctggcatcacactggtgttgctcaccaaggtt
cgtgggtgtaaacagattcccaccagtgccgtagccatgtccatctataagtttctggaa
gctttcaccaagttggagaagtgtttaggtgaaggtcaagacagttctgctgcgtctaga
ggtcagctggccattcacgacatccgcagtaaactggataaattcatcaaagctctgggg
cccagtgagttacagtctgcacagttactaaatgtctggacagagttcaaaaaccgagct
tttgtcagaggtggatctggcttcaacaaagatctccttccctggtgtacgagaatgaaa
acccagctgtgtgggatttatagacagtgttttctgtcaccgtgtggacccggtgacgtc
actcaacgtttgtccagtagtctacaggaacgggcccagaccatggtgcaagaaaaactg
atggattggagggacttcctgttggtgaagagcaaacgaaacatcacaatggtgtcttac
ctggaggatttcccaggtctcatccatttcatctgtgtggaccgatccaccggtcaaatg
attgcaccgtcactcaccatcactgaacgcaccacgtctgagctggggaaaggaccgctg
gctcagtttttcaagaacaaggtgtggagtctggtcagcaccaccagatgcttcctgcga
aagggttattccacggtgacactgcgggacggagacttctacttctgctacttcctgtgg
tttgaaaatgacacggggtacaagttagaagcaggagacttgcctatcctacctgatgac
tccgcccccattggaatgctggcctgggattactacaggaagctgcagaggtattacagt
aagagccaccagggggaggtagtgaggtgctacgagctgctgaccgttcacctgggggtc
atccccacggagatcatcctgcagcactgcagacagctggccagcaaactgtgggagcct
tcacgaaatccgctactgtag
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