Cynoglossus semilaevis (tongue sole): 103387353
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Entry
103387353 CDS
T04866
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
103387353 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csem03036
]
103387353 (ercc6)
03400 DNA repair and recombination proteins [BR:
csem03400
]
103387353 (ercc6)
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
103387353 (ercc6)
DNA repair and recombination proteins [BR:
csem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
103387353 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Motif
Other DBs
NCBI-GeneID:
103387353
NCBI-ProteinID:
XP_008320173
UniProt:
A0A3P8VG45
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All DBs
Position
12:9526778..9540890
Genome browser
AA seq
1444 aa
AA seq
DB search
MPVEGSEDQVPSSLSSPASAALTPGGADEDGAAGGSGLCSFPDTSKGSEAAAAFPANTGP
GESNSGGKRSGALLQINRQRIQAACASSGADELQGLGVAVYDQDILEQGVLQQVDEAIQE
ANQASAKAEAEKEYQSVLDDVRSVTSSLKQINKIIEQLTPYAASSKDISRKIESVKRQKE
NKEKQLKKVKAKQRRLQAILGGEDAQRVEDELLAECDDEEEAGPSTLGSMLMPVQETEWE
ELIRKGHMTPFGTRIPQKEDKKEPRKIMLAENSAFDQYLSDQAKLATERKKGPSLKKKKS
SGLRPDKKDSVKTQKKLSPKDKKLKKRMRKLQITALKAHPKARPKNEPHPPKLKRKHRTD
GEETESDGSEYLPSDEVIDPDEEERQAMEEGFGEEGDDEEYELKLFNRRKTDGRARKNAK
TKQDSEEEYCPESSGEEEEEGKGKLKKFKDDGDVEYYRQRIRKWKRQRLREREEKRQRGE
ELTDDSDAEFDEGFKVPGFLWKKLYKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQVI
SFLAGLSYSKLRTRGSNYRYAGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHETGSF
TSNKERLIPEIAACHGILITSYSAVRNMQDTFQRYDWHYTILDEGHKIRNPNAGITTACK
QFRTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLQVFMEQFSVPITIGGYSNASPVQ
VQTAFKCACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEEQRQVYQGFLDSK
EVYQILNGDMRVFSGLIALRKICNHPDLFSGGPKMLRGIPEDQLTEEEHFGFWKRSGKLI
VVESLLRLWFKQGHRVLLFTQSRQMLDILEVFVRDNNYSYLKMDGTTTIGSRQPLIAHYN
EDQSIFIFLLTTKVGGLGVNLTGANRVILYDPDWNPSTDTQARERAWRIGQKQQVTIYRL
LTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDMYELFTLSDPDGKQGTETSAIF
AGTGSDVKVPKKTERPKPPHMLNNGRKSESRAETGENNRHSTNTTSLKDRIAAVGRSSSS
QVKLNASTDSKSSNQTGVNVKPDTSANVTQTEQNDRDWTSVRPMSSNSTRDEDSALTSPQ
KHRKKRKHCDSDKHSHRKSKHSRGSAFEGQRISHLVKKRTYKNEEKEDNETRDQKKSDDY
VLAKLFKKSGIHSVMQHDSIIESSNPDFVLVEAEANRVAKDALKALKVSRQQCRLPFNRP
PPAPARKRFGQKKNSLLATPFVQSAPLPTKCKDAAVVKKSVSKKPGSAALFSGEWAEGDS
NTAPLSSSSLLAKMKARNFISVPSSQRGGEEEEENDEDSTRPPERSSPSAPSTQHDELLA
DLHNFVAFQANVDGQASTQEVLEYFKPRLTKEQAPVFRELLRSICNFHRTSGQEGIWKLK
EQFQ
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcgaaggttctgaggaccaagtgccttcatctctctccagtccagcaagtgca
gcactcaccccaggaggggcagatgaggatggagctgcaggaggttcaggactctgctct
tttcccgacaccagtaagggctctgaggcagctgcagcctttcctgccaacactggacct
ggagaaagcaacagtggtggtaagaggtctggagcattattgcagatcaacagacagcgt
atacaagcagcttgtgccagttcaggggcagatgaactacaaggcctcggtgtggccgtg
tatgatcaggacattcttgagcaaggtgtcctccagcaagtggatgaggcaatacaggag
gccaatcaagcctcggctaaggctgaggctgagaaggagtaccagtctgtgttggatgat
gtcaggtctgttacctcatctctgaagcaaattaacaagataattgagcagctcacgcct
tacgctgcttccagcaaagatataagtcgaaagattgaatctgtcaagcgacagaaggag
aataaggaaaaacagctaaagaaagtcaaagcaaaacagagacgacttcaggctattctg
ggaggtgaagatgcccagagagttgaagatgagcttttagctgaatgtgatgatgaagaa
gaagccggaccgtccacactgggcagcatgctcatgccagttcaggagactgaatgggag
gagcttattcgaaaagggcacatgactccttttggaacccgaatccctcaaaaagaggac
aagaaggagcctcgaaaaattatgctggctgagaattctgcctttgaccagtacttgtct
gatcaagctaagttagcaacagaaaggaagaaaggtccttctttgaagaaaaagaagtcc
tcaggactcagacctgacaagaaagacagtgtaaaaacccaaaaaaaactttctcccaag
gacaaaaagcttaagaagcgcatgagaaaacttcagatcactgctctgaaggctcatcca
aaagctcggcctaagaatgagcctcatccacctaaactaaagaggaagcaccgtacagat
ggagaggaaactgagagtgatggttcagagtatctgccctctgatgaggtcatagatcct
gatgaggaagagagacaagccatggaggagggatttggagaggagggagatgacgaagag
tacgagttaaaactatttaatagaagaaaaactgacgggagggcgaggaagaacgctaag
acaaagcaggacagcgaggaggaatactgcccagaaagttcaggcgaggaagaggaggaa
gggaagggtaaactgaagaaattcaaagatgatggagatgtggagtactacagacagaga
ataaggaaatggaagcgtcagcgtcttcgagaaagagaggagaagaggcaaagaggcgaa
gagctcaccgacgacagtgacgccgagtttgatgaaggcttcaaagtgccaggattcctc
tggaagaaactttacaagtaccagcagacaggtgtgcgatggctgtgggagctccactgt
cagcaggcagggggcatcctgggagatgagatgggactgggtaaaaccatccaagtcatc
agctttctggctggtctgagctacagcaaactcaggaccagaggatccaactacaggtat
gcaggtctggggccgacagtcattgtgtgcccagctacagtcatgcaccagtgggtgaag
gagtttcacacctggtggcctcctttcagagtggctgttctgcatgaaaccggctccttc
actagcaataaggaaaggctcattccagaaatagcagcatgccacggtatcctgatcacc
tcatactcagctgtcaggaatatgcaggacaccttccagcggtacgactggcactacaca
atacttgatgagggccataaaataaggaatccaaatgctggaattaccacagcctgtaaa
cagtttcggactccccacaggttcattctctcaggctctcctatgcagaacaatttaaaa
gagctgtggtctctgtttgacttcgtcttcccgggcaaattgggaacattacaagtgttc
atggaacagttctctgtgccaatcactattgggggctacagcaacgcctcacctgtacag
gtccagacagcgtttaagtgtgcatgtgtgctgagggacaccataaatccttacctgctc
agacggatgaaggcagatgtcaaggccaatctctccttgcctgacaaaaatgaacaggtc
ctgttttgcagattaacagaagaacagaggcaggtgtatcagggcttcttagattccaaa
gaggtctaccagatactaaatggagacatgcgggtgttctctggtctgatagcgctccgt
aagatctgtaaccaccctgaccttttctcgggcggtcccaagatgctgaggggaatcccc
gaggaccagctgacagaggaggaacactttggcttttggaaacgctctgggaagctgatt
gtggtggagtcactgctgcgtctctggttcaaacagggccacagagttctcctcttcact
cagtctagacagatgctggacattttggaggtgtttgtaagggacaataattactcctac
ctaaaaatggacggcaccaccacaataggttcccgacagccgctcatcgctcactacaac
gaggatcaatccatatttatcttcctgttaaccaccaaggttggaggtttgggagtgaat
ctgactggagccaacagagttatactctatgacccagactggaaccccagtactgacaca
caggcaagagagagagcatggaggatcggtcagaagcagcaagtgaccatctacagactg
ctgacggcaggaaccatcgaggagaaaatctaccacaggcaaatcttcaaacagtttctc
accaatcgggttctgaaagaccccaaacagagacgcttctttaagtccaacgacatgtat
gaactcttcaccctgtctgaccccgatggtaaacagggaacagagaccagcgctatattt
gcaggtacgggctctgacgtcaaggtaccaaagaaaacagagagaccaaaaccaccacat
atgttgaacaatggcaggaagagtgagtccagggccgaaacaggggaaaacaacagacac
tcaacaaacacgacttcactgaaggacagaattgcggctgtggggaggagcagcagctcg
caggttaaactgaacgcatcaacagacagtaaaagcagcaaccaaacaggagtcaatgtg
aaaccagatacctcagcaaatgtgacacagacagaacaaaacgacagagactggacctca
gtccgacccatgtccagtaactccaccagagatgaagactcagccctgacaagtccacag
aagcacaggaaaaagaggaagcactgtgactccgacaagcacagtcacaggaaaagcaaa
cactccagaggttccgcctttgaaggccagcgcatctctcacctggtgaagaaaaggacc
tacaagaacgaagaaaaggaggacaatgagaccagagaccagaagaaatcagacgattac
gtcctggcaaagctcttcaagaagtctggtatccacagcgtgatgcagcatgacagcatc
atcgagtcctccaacccagactttgttctagtggaggcagaagccaacagggtggctaag
gatgctctgaaagcactaaaggtctcgcggcagcagtgcagactgccctttaacagacct
cctcctgcacctgcaaggaaacggtttgggcaaaagaagaattctctgctggctacacct
tttgtccagtctgctcctcttcccactaagtgcaaggacgctgcggtcgtaaagaagtcg
gtgtcaaagaagccaggctcagcggctctgttcagtggtgagtgggcagaaggtgactct
aacacagcaccactctcctcctcctccctgctggccaaaatgaaggcccgcaatttcatc
agtgtgccctccagccaaagaggaggagaagaagaagaggagaatgatgaggacagcacc
aggcctcctgaaaggagctccccctcagctccgtccactcagcatgacgagctgctggca
gatttacacaactttgtggccttccaggcaaacgtggacggacaggcctccacccaggag
gtgctggagtatttcaaacccagactgaccaaggagcaagcaccggtcttcagagagctg
ctcaggagcatctgtaacttccacaggacttctggacaagagggcatctggaaactcaag
gagcaattccaataa
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