Cynoglossus semilaevis (tongue sole): 103387453
Help
Entry
103387453 CDS
T04866
Symbol
pkd2l1
Name
(RefSeq) polycystic kidney disease 2-like 1 protein
KO
K04990
polycystin 2L1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csem03037
]
103387453 (pkd2l1)
04040 Ion channels [BR:
csem04040
]
103387453 (pkd2l1)
Cilium and associated proteins [BR:
csem03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
103387453 (pkd2l1)
Ion channels [BR:
csem04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103387453 (pkd2l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_6
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
103387453
NCBI-ProteinID:
XP_008320329
LinkDB
All DBs
Position
12:10671197..10677469
Genome browser
AA seq
799 aa
AA seq
DB search
MKCLNNRAETHLRGQVECELDAVGRGAWVNQGYCGSPPPLPRAVSTIYNPQPLFQGSMDS
MYKLDSPGLFDHPPVEQTPAEKSQEKKQRGCCSFIKGLWGTTLMENTSNNRELFVRTTLR
ELLVYVVFLVDICLLTYGMTSSSTYYYTKAMTDLFVNTASESGVRFQSIGTMADFWAYTQ
GPLLDGLYWTKWYNNQSLERGEQSFIYYENMLLGVPRMRQIKIKNNSCKVHKDFQDEITG
CFDVYNKKKEEDLSFGLINGTAWTYHTEKQVKGSSHWGLLTTYSGAGYIQDLNRTKDDSA
TILQELIDNLWLDQGTRVTFIDFSTYNANINMFCVIRLVVEFPATGGAIPSYQIRTVKLL
RYITYWDFFILGCEVVFCLFILYYVVEEILELRIHRFSYFKSIWNILDIVVILLAVVAIA
FNVFRTVKVDKLLGKLLEQPDIYADFEFLAFWQTQYNNMNAVNLFFAWIKVFKYISFNKT
MTQLSSTLGRCAKDILGFAIMFFIVFFAYAQLGYLLFGTEVESFSTFVKCIFTQFRIILG
DFDYDAIDRANRVLGPIYFVTYVFFVFFVLLNMFLAIINDTYSEVKEELSSQKDELQITD
IIKQSYMKTFMKLKLKKEKISDVQKALHSGSGEIEFKDFRETLKEMGHADHEISAAFSQF
DHDGNQILDKDEQQRMKMELEEKRDALSAELNKLGKNYEKDLLEKPAKNSNEQRHTGQIF
VNREQFLKLSRQVLHLESSMTGITQRIDLIVEKLGLYERNKHDDDTASDGSILVCVDRGT
RSNLSFRRPEVPTNVDCHM
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtctgaacaaccgggctgagactcacctgagaggacaggtggagtgtgagctg
gacgctgtgggccgaggggcctgggtcaatcagggctactgtggttctcctccacctctg
ccacgggctgtcagcaccatctacaaccctcagcctcttttccagggctccatggacagc
atgtacaaactggacagtcccggtctgtttgaccatccacctgtggagcaaacacctgct
gagaaaagtcaagagaagaaacaaagaggttgctgctcttttatcaaagggctttggggc
acgacactgatggaaaacacctccaacaacagggaactgtttgtacgaactacgctgagg
gagttactggtctacgtggtgttcctggtggacatatgtctcttgacgtatggtatgacc
agttccagcacctactattacactaaagccatgaccgacctgtttgtgaacacggccagt
gaaagtggggttaggttccagtccattggtaccatggccgacttctgggcttacactcaa
ggcccattactggatggcctctactggacaaaatggtacaacaaccagtcactggagagg
ggagagcagtccttcatctactatgagaatatgttgctgggtgtccccaggatgaggcaa
ataaaaatcaaaaacaactcctgcaaagtccacaaagacttccaggatgagatcacaggc
tgtttcgatgtttacaacaagaagaaggaggaagacctcagctttggtctcatcaacgga
acagcttggacctaccacactgagaagcaggtcaaaggttcctctcactggggcctgctg
accacatacagcggagcaggatacatccaagacctgaaccgcacaaaagatgacagcgcc
accatactccaggaactgatagacaacctgtggttggaccagggaaccagagtgaccttc
attgatttttccacctacaatgcaaacataaacatgttctgtgtaatcaggttggtagtt
gaattcccagctactggtggagcaatcccttcttaccagatccgaacggtcaaacttctt
cgctacatcacctattgggatttcttcatccttggctgcgaggtggtgttctgcctgttc
attctctattatgttgtggaggagattctggagctacggatacatcggttctcctacttt
aaaagcatctggaacatactggacattgttgtcatattgctggccgtggttgccatcgca
ttcaatgtgttccgtacggtcaaagtggacaagcttcttggcaaactgctggagcaacca
gatatctacgccgattttgaattcctggcattctggcaaacacaatacaacaacatgaat
gctgtcaacttgttctttgcgtggatcaaggttttcaagtacatcagctttaataagacc
atgactcaactgtcgtccacactggggagatgtgctaaagatatcctgggatttgccatc
atgttcttcatcgtcttcttcgcctacgctcagctgggatatttgctctttggtacagag
gtggaatcattcagcacctttgtgaagtgcatcttcacccagttcaggattattctggga
gactttgattatgacgctatcgaccgtgctaacagagttcttggaccgatatactttgtc
acctacgtgttctttgtcttctttgtcttgttgaacatgtttttagccatcataaatgac
acgtactctgaggtcaaggaggagctctcatcgcagaaggatgagctacagatcacagac
atcatcaaacagagctacatgaagaccttcatgaagttgaaactcaaaaaggagaaaata
tctgatgtccagaaagccttacattctggatctggagagattgaattcaaggacttcaga
gaaactctgaaagagatgggacatgctgatcatgagatttctgcagctttctcacagttt
gaccatgacgggaaccagattttggacaaagacgaacaacagagaatgaaaatggagctg
gaggaaaagagggatgctctgagtgctgaactgaacaaactggggaagaactatgagaaa
gacttacttgagaaaccggccaaaaactccaacgagcagaggcacaccggtcaaatcttt
gtgaaccgggagcagtttttaaagctgtccagacaggtcctccatctggagagctccatg
acaggcatcacacagaggattgatctgattgtggagaaactgggattatatgagagaaac
aaacatgatgatgacactgcctcagacgggagcatcctggtttgtgtggacagaggcacc
aggagcaatctctccttcaggagaccagaggttcccaccaatgttgactgtcacatgtga
DBGET
integrated database retrieval system
