Cynoglossus semilaevis (tongue sole): 103387464
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Entry
103387464 CDS
T04866
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103387464 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csem04990
]
103387464 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
csem04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
103387464 (pdlim1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Arc_trans_TRASH
DUF5447
Motif
Other DBs
NCBI-GeneID:
103387464
NCBI-ProteinID:
XP_008320347
UniProt:
A0A3P8VE65
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Position
12:complement(10803610..10812577)
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AA seq
323 aa
AA seq
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MSPVKVVMQGGGPWGFRLVGGKDFEQPLAVSRVTPGSKAAQANLCIGDIFLAIDGESTEN
MTHMDAQNKIKGCGDELVLSIDRSETKLWSPLSSKEGKTHPYKMNLESEPQEVRHIGSTH
NRSALPFSGFGSKVVTNQYNNPSGLYSSENIENFNSAVDEVKSSTTANEPANKTPTDASM
TNKRPPLAEDSEVYKMLQENQESDEPPRQSASFKVLQEILESGDSDKPSGFRSVKAPTTK
IGSSVGNTEKLPQCDKCGSGIVGMVVKLRDKFRHPECYTCTDCNTNLKQKGHFFVEDQIY
CEKHARERVTPPEGYDVVTVFPK
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtctccagtgaaggtggtgatgcagggtggaggaccttggggttttaggcttgtcggt
ggaaaggacttcgagcaacctctggctgtttcccgggtcacccctggctctaaggcagct
caggccaacctgtgtatcggagacattttcctggccatcgatggagaatccacagagaac
atgactcacatggacgctcagaacaagatcaagggctgcggagatgagttggttctctcc
atagacaggtcagaaaccaagttgtggtctccgctctcatccaaggaagggaagacacat
ccatacaagatgaatcttgagtcagagccacaggaggtgagacacatcggctccacccac
aacaggagcgccctgccgttctccggctttggctccaaagtggtgaccaaccagtacaac
aacccttctggcctctactcttcagagaacattgagaacttcaactcggctgtggatgaa
gtgaaaagcagcactacagccaacgaacctgccaacaaaactcctacagacgcttcaatg
acaaacaagcggccaccgttggcggaagattcagaagtttacaagatgctccaggagaac
caagagtccgacgagccaccccgacagtcggcttcattcaaagtgctgcaggagattttg
gagtcaggcgactctgataaaccatcagggtttaggagcgtgaaggcacccacgacaaag
atcggttcctcagtagggaacacagagaagttaccccagtgtgacaagtgtggatctggg
atcgtgggtatggtggtgaagctgcgggacaagttccgccaccctgagtgctacacctgc
acagactgcaacaccaaccttaaacagaagggacatttctttgtggaggaccagatttac
tgtgagaagcacgcaagagagcgggtgacaccgcccgagggctacgacgtggtcaccgtc
ttccccaagtag
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