Cynoglossus semilaevis (tongue sole): 103387479
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Entry
103387479 CDS
T04866
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csem03021
]
103387479 (btaf1)
Transcription machinery [BR:
csem03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
103387479 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
HEAT_2
Vac14_Fab1_bd
HEAT_EZ
TPR_Trm732_C
ARM_ECM29
Arm
Motif
Other DBs
NCBI-GeneID:
103387479
NCBI-ProteinID:
XP_008320366
LinkDB
All DBs
Position
12:complement(11228177..11243325)
Genome browser
AA seq
1862 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLAYLRSPNWDTRI
AAGQAVEAIVQNIPVWNPTPRPKEESCAELSPEDSSSDRLTFYHFDISRLLKHGASLLGS
AGAEYELQDDKAAEMDPKERLAHQRKLLQKKLGLNIGAAMGMDTEELFNDEDLDDTSQSS
GFKAHGSKALAGFGSHNHVPMQAAELIDSEFRPGMSNRQKNKAKRMAKLVAKQRSRDVDT
NEKSNESTEGEPEEKRRKTTNVVIDQPATEHKVLIDNVADNSTLLDEINEWPLESFCEEL
CNDLFNPSWEVRHGAGTGLREILKAHGAGGGKLVGSTAEQLLRQHQEWIEDVVIRLLCVF
ALDRFGDFVSDEVVAPVRETCAQTLGVALRHMSETGVSMTVDVLLKLLKEDQWEVRHGGL
LGIKYALAVRQDLISVLLPRVLPAITVGLQDLDDDVRAVAAAALIPVVEGLVQLLPSKVP
FIVNTLWDALLDLDDLTASTNSIMTLLSSLLTYPQVRQCSIFLSPSSTQESLTVLVPRVW
PFLRHTISSVRRAALQTLYTLLSKDDQSCALWINPILQDMLRHIFQSCILESNEEILELI
QKVWTELLSQPPQQYVVAASCPWMGAWLCLMMQASHIPIDLNMLLEVKARSKAGSKARQG
GNQVKETVQEYIAGAETVTEDPGTRDYAVVRARLMAAKLLGSLCRCICDPQLNAASQEIR
PAESLGQLLLFHLNSKSALQRIAVSLVLCEWAALQKDCQVVSSMVQPRLLAILSEQLYYD
EIAIPFTRMQNECKQLIALLADAQIDVQERLNCNVFTIDQANELVTTIFSESTAGLNVKS
KQWQALDSKRQQAQATVTETSAEWQQLHLRVHMFTACAVINLQVLPDKLNPLVRPLMEVI
KKEENTLIQGYAAAFIAKLLQQCTGRSPCPNPKIIKNLCASACVDSLVTPSSASPVSPTQ
ENAKAVGLEKDGMNHMVNKTRGIITLYRHQKAAFAITSKRGPVPKAPKAPTQEYPPGSSI
TTDNDESRKPFLIQRRGGEFSLTTVARHFGAELIKSLPYLWDNTVGPLRAVVTENHSIDR
KIQLERGDAAAQELVNSLQVLEVIAGAMASELKPLVLEHLPHLFTCLQHPYTSVRHMAAR
CVGVLSKLAMLETMNSFLERVLPWLAAIDDCTKQEGAIEALACVMEQLDVDIVPYIVLLV
VPVLGRMSDPSDTIRFMATQCFATLIRLLPLEAGIPDPPAMSADLIRQKARERQFLEQLL
DGRKLENYKIPLPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGD
HYLRSQKYAKTKAADCSPMPSLVVCPPTLTGHWIDEVCKFCSREYLNPLHYTGPPTERMR
LQHQVKKHNLIVASYDVVRNDIDFFKNIKFNYCILDEGHVIKNGKTKLSKAIKQLAANFR
VILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLA
MEALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCNLSPLQIQLYEDFAKSRAKASVEDTI
NVASTEEEEKPKLKATGHVFQALQYLRKLCNHPSLVLTQQHPEYKRIIEQLAGQNSNLRD
LQHAPKLSALKQLLLDCGLGGGAGSEGGTEAVVAQHRVLIFCQLKSMLDIVEHDLLKPKL
PSVTYLRLDGSVPAGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWN
PMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMSIANTIISQENASLQSM
GTDQVLNLFTLDKDQKGDKGDQTPSTSGKASMKTVLDGLGELWDQQQYDTEYSLDSFMSS
LQ
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtcaagacttgatcgtttgttcatcctacttgacactgggacaacaccagtt
accaggaaagcagcggctcagcaacttggagaagtggtcaaactccacccacatgaactg
aataatcttctctcaaaagtcttggcgtacttgaggagtcccaactgggacactagaata
gcagcaggtcaagctgtagaggccattgtgcaaaatattcctgtgtggaatccaactcct
agacccaaagaagagtcttgtgcagaattatctccagaggactcctcgagtgatcggttg
actttttatcattttgacatttcccgtctgcttaaacatggggcatccctgctgggatct
gctggggctgagtatgagctgcaggatgacaaagcagctgagatggaccctaaggagcgt
cttgctcaccaaaggaagcttcttcagaagaagttgggtctgaacattggtgctgccatg
ggaatggacacagaggaattgttcaatgatgaggacctggatgacacctctcaatccagt
ggatttaaagcgcatggaagcaaagcactagctggatttggctcccataaccacgtgcca
atgcaagctgctgagctgattgactcagagttccgaccaggcatgagtaatcgtcaaaag
aacaaggctaagaggatggctaaactagtagccaaacaaagatctagagatgtggacacg
aatgagaagagtaatgaaagtaccgagggtgaacctgaagagaaaaggaggaaaaccaca
aatgtcgttatcgaccaaccagcaacagagcataaagtcttaattgacaatgttgcagac
aactccactcttttagatgagataaatgagtggcctctggagagcttttgtgaggagctc
tgcaatgacctttttaacccttcgtgggaggttcgtcatggggctggaacaggtcttcga
gaaatcctcaaggctcacggagccgggggtggaaagttggttggaagcactgcggaacag
ttgctgcgacagcatcaagagtggattgaggacgtggtcattcggctcctctgtgtcttt
gctctggatcgctttggggattttgtttctgatgaagtggtggctcctgtcagggaaact
tgtgcccaaactcttggtgttgcccttcgtcacatgagtgaaactggtgtttcaatgaca
gtggatgtcttgcttaagctgcttaaagaggaccagtgggaggtccgtcatggaggcctg
ctgggaatcaagtacgccttggctgtccgacaggacctgatatccgtcttgctacctcgg
gtgttgcctgccattactgtaggcctacaggacctcgatgatgatgtcagagctgtggcc
gcagcagctctcatccctgtggtggaaggtttagtacaactacttcccagtaaggtgcct
tttatagtgaacacactctgggatgctctgttagacctggatgaccttactgcttccacc
aacagcatcatgacattgctgtcctcattgctcacgtatccgcaggttcgacagtgcagc
atattcctgtctccttccagcacgcaggagtctttaacagtccttgttccccgggtctgg
ccgttcttgagacacacaatatcatcagttagacgtgcagcgctgcaaaccctctacacc
ctgctttctaaagatgaccagagctgtgcattgtggattaaccccatccttcaagatatg
ctccgacacattttccagtcctgcatactggagagcaatgaggaaatccttgagctgatt
cagaaggtgtggacagaactgctcagtcagcctcctcagcagtacgtggttgctgccagt
tgtccgtggatgggtgcatggctctgtctcatgatgcaggcctcacacatccccatagac
ctcaacatgctgctggaagtgaaagcacgctcaaaggctggatcaaaggcacgtcaagga
ggcaaccaggtgaaggaaacggtccaggaatatatagcaggtgcagaaaccgttacagaa
gatccagggacaagagattatgcagttgtccgagctcgtctaatggctgccaagctgctg
gggtctttatgtaggtgtatttgtgaccctcagctaaatgctgcatcccaggagatccga
ccagctgagtcgttaggtcagctcctgctgttccacctcaactccaagtccgccctacag
cgcatagctgtgtctctggtgctgtgcgagtgggctgcgttacagaaggactgtcaggtg
gtgtcgtccatggtgcagcctcgactcctggccattctgtccgagcagttgtactatgat
gagattgccattcccttcacacgtatgcagaatgagtgcaagcagcttattgcgctgctc
gctgacgcccagatagatgttcaagagcgtctcaattgtaatgtttttactatagaccaa
gccaatgaactggtaaccacaatttttagtgagtcaacagcaggcttgaatgtgaagtct
aaacaatggcaggccctggacagtaaacggcagcaggctcaggcaacagtgacagaaaca
agtgcagagtggcaacagcttcatctgcgcgtccacatgttcacagcctgcgccgtgatc
aacctgcaagtccttcctgataaactcaaccctctggtccgacccttaatggaggtcatt
aagaaagaggagaacactctgattcagggttatgctgctgcttttattgccaaactgctg
cagcagtgcacaggacgttctccctgccctaaccctaaaatcatcaaaaatctttgtgct
tcagcctgtgtggactctttagtcacaccttcatctgcttctcccgtgtctcccacacag
gaaaatgcaaaagctgtggggctggagaaagatggcatgaatcacatggttaacaaaacc
cgtggaattatcacactgtaccgtcaccagaaagcagcttttgccatcaccagtaaaagg
ggaccagtacctaaagccccaaaagcccccacccaagaatatcctccaggcagctccatc
actactgacaatgacgagagcaggaagccgtttcttattcaaagacgagggggagaattc
tccctgacaactgttgccaggcactttggtgcagagctcatcaaatctctaccatacctc
tgggacaacacggtggggccactgagagccgtggtgactgaaaatcactcgattgatagg
aagatccagttggaacgaggagatgctgcggcccaggaactggtgaactccctgcaggtt
ttggaagtcattgccggggcaatggcatctgaactcaagcctctggtattggagcacctg
ccacatctgttcacctgcctgcagcatccatacacatctgtgcgtcacatggctgcacgt
tgtgtgggtgtgttaagtaaactggcaatgctagagaccatgaacagtttccttgagcgt
gtgcttccctggttagctgctattgatgactgcaccaaacaggaaggagccatcgaggca
ttagcctgtgtcatggagcagctggatgtggacattgtaccatacatcgtgctgctggtt
gtaccagtgttgggccgcatgagtgaccccagtgataccattcgtttcatggccacgcag
tgctttgctacactcatccgtctgctgccgctcgaggcaggcataccagaccctcccgcc
atgtctgctgacctcattcgccagaaagccagggaacgccagtttcttgaacaattgttg
gatgggagaaagttggaaaactacaagattcctttgcctataaaggctgaactcaggaag
tatcagcaggatggagtgaactggctggctttccttaacaaatacaagcttcatggaatc
ctgtgtgatgacatgggtctcggaaagaccctgcagtccatctgcattctggcaggggat
cactacctcagatctcagaaatatgccaagactaaagctgccgattgcagcccaatgccc
tctctggtggtgtgtcctcccacactgactggtcattggattgatgaggtctgcaaattc
tgcagcagagagtaccttaatccgctgcactacactgggcctcccacagagagaatgcgg
ttgcaacaccaggtgaagaaacacaatcttatagtagcctcttatgatgttgtacgaaac
gacattgacttttttaaaaatatcaagttcaattattgtattcttgatgagggtcacgtg
atcaaaaatgggaaaaccaaactttctaaggcaattaaacagttggctgccaattttcga
gtaatcctctcaggaacacctattcagaacaatgttctggagctctggtcattgtttgac
ttcctcatgccaggattcctgggaacagaacggcagtttgctgcacgctacggtaaacca
atcttggccagtcgtgatgccaaaagttcctcacgggaacaggaggccggcgttttggca
atggaggccttacatcgacaagtactaccttttcttctgaggaggatgaaggaagatgtt
ctgcaggatcttcctcctaaaatcattcaagattattattgcaacctaagtcctttacag
attcagctgtatgaggactttgccaagtctcgagccaaagccagtgtggaggataccatc
aatgtagcctccacagaagaggaggaaaaacccaagttgaaagctacaggccacgtcttt
caggccctacagtatctgcgcaagctgtgcaaccaccccagcttagtcctgactcaacag
catcccgagtacaaacgcattattgagcaacttgcaggtcaaaactcaaacttgagagac
ctgcagcatgcccccaaactctctgctctgaaacagttactgttggactgtggtctcgga
ggcggagcaggatccgaaggtggcaccgaggcggtggtcgcccagcaccgtgttctcatt
ttctgtcagctgaagagcatgttggacattgtggagcatgacctgctaaaacccaaattg
ccttcagtcacctacctgaggctggatggcagtgtaccagctggccagcgccactccatt
gtttccaggtttaacaatgatccatccattgacgtactgctgctgaccacccatgtcggt
ggtcttggtctgaacctgactggtgcagatactgtggtgtttgtggaacatgactggaac
cctatgagggacctacaagctatggaccgagcccataggataggacagaaacgtgtggtg
aacgtgtacagactgatcacacggggaacgctggaggagaagataatgggtcttcaaaag
ttcaagatgagcatcgccaacaccatcattagtcaagagaatgccagtctgcagagcatg
ggcacagaccaggtcctcaaccttttcacactggacaaggatcagaaaggagacaaaggt
gatcaaacaccatcaacctcagggaaggcctccatgaagacggtgctggacggtctggga
gagttatgggaccagcagcagtacgacacagagtacagtctggacagcttcatgagctct
ctgcagtaa
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