Cynoglossus semilaevis (tongue sole): 103387493
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Entry
103387493 CDS
T04866
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103387493 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csem03021
]
103387493 (polr1b)
Enzymes [BR:
csem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103387493 (polr1b)
Transcription machinery [BR:
csem03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
103387493 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
103387493
NCBI-ProteinID:
XP_008320388
UniProt:
A0A3P8VLG8
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All DBs
Position
12:complement(11443161..11449536)
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AA seq
1134 aa
AA seq
DB search
MDFCEKWKDLPKSPSLKNLTQERFGVLKESQHAAVQDLTRVHIESFDQAVTDGLSRVVQA
IPPLEFTVKNDKISLSFVEAMIHNPVVTKGNICREMKVFPAECRGRRCTYKGKIVADVTW
SINGVPKGTIKQSLGHVPIMVKSKLCNIYGMSPKELVEHHEEAEEMGGYFIVNGIEKVIR
MLIMPRRNYPIAMSRPKWKSRGQGYTQYGISMHCVKEEHTAINMNLHYLENGTVMLNFIY
QKELFFLPLGFALKALVDFTDFQIYQELIKGREDNSFYKSCVAEMLRIVMEEGCTTRCKV
LNYLGERFRVKLNLPEWYTSEQCAHFLLDECLCIHLKSDVEKFYLLCLMTRKLFTFAKQE
CMEENPDSIMCQEVLTPGRLYLMFLKEKMTSWLVSVKLAFNKRASRLNGGWTPENMMKLF
NLGTDVTRSFEYLLATGNVTSKTGLGMLQNTGLCVVADKLNFIRYLSHFRCIHRGAAFAK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAICEIVAPTLPTTSLPALLCSLGVV
PVDASPGQNFADCYPVILDGTVVGWLESELAPAVVESLRTFKVLRERKIPPWTEIVLVPK
TGKASLYPGLFLFTTPCRLVRPVRNLALGKEELIGTFEQLYINVGILEDEIEPGVTTHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFMDRSDNKLYRLQTPQSP
MVRPYMYDHYNLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELVD
LTQKVTGDDGVVFGTTPDDPKVNGKLDADGLPYIGSTLKYGDPFYCSINVNTGDSHIHYY
KSQETCVVDNIKICSNDHGTGHFKRVCITVRIPRNPTIGDKFASRHGQKGILSRLWPTED
MPFTESGMTPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPFTFSEQNSALEY
FGEMLRAGGYNYYGTERLYSGLSGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPVGGRNIQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCMDCGSLLSPLL
EKPPPSWSSMRHRKTVCTLCGKSDSIDSVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggacttttgcgagaagtggaaggatttacctaaaagtccaagtttaaagaatctgaca
caggaacgttttggtgttctaaaggagtctcaacatgcggcagttcaggacctgaccaga
gtacacatcgagtcttttgaccaggctgttactgatggactcagccgagttgtacaggcc
atccctcccttggagttcactgtaaaaaatgacaaaatcagcctttcatttgtcgaagcc
atgatacacaacccagtggtgacaaaaggcaacatctgcagggaaatgaaggtgtttcca
gctgagtgcagaggaaggaggtgcacttacaaagggaagatagtggccgatgttacctgg
tcaatcaatggagttcccaaaggtaccatcaaacagtccctgggtcatgtgccaataatg
gtcaaatccaagctctgtaacatctatggtatgtctcctaaggagctggttgaacaccat
gaagaagcagaggaaatgggaggttacttcattgttaatggaattgagaaggtcattcga
atgctgatcatgcccaggagaaactatcctatagctatgtcgcgacccaagtggaagagt
cggggccaaggatacactcagtatggtatttctatgcactgtgtgaaagaagagcacaca
gccatcaacatgaatctgcactatctggaaaacgggactgtgatgctgaactttatttac
cagaaagagctcttctttctcccactaggctttgcactcaaggccttagttgacttcaca
gattttcagatctaccaagagctgataaaaggccgtgaggacaattccttctataagagc
tgcgtggctgagatgctgcgcattgtgatggaggagggctgcaccacccgctgcaaggtg
ctcaactacctcggagagcgattcagggttaaactgaacttgcctgagtggtacaccagt
gagcagtgtgctcacttcctgctagatgagtgcctctgtatccacctgaaatctgatgtg
gagaagttctacctgctctgtctgatgacaaggaagcttttcacctttgccaagcaggag
tgcatggaggagaatcctgacagcatcatgtgtcaggaagtgttgacccctggtcggctc
tacctcatgttcctgaaggagaaaatgacttcctggttggtgtcggtgaaactagccttt
aacaagagagccagcagactaaatggaggatggactcctgaaaacatgatgaaactgttt
aacctgggcacagacgtgaccagatcttttgaatacctgctggctactggaaacgttaca
tccaaaacaggtcttggcatgctgcagaacacaggcctttgtgttgtcgctgacaagctc
aacttcatccgctacttgtcccacttccgctgcattcacagaggagctgcctttgctaag
atgaggaccacctctgttcgaaagctgttacccgagtcctggggcttcctgtgccctgtc
cacaccccagacggcgaaccctgtgggcttatgaaccacatgacagctatctgtgagatt
gtagctccgacactgccaaccacctcactccctgctctgctctgctccctaggtgttgtt
cctgtggatgcatctcctggccagaactttgcagactgttaccctgtgatccttgatggg
actgtggtgggctggctggagtctgagttagcaccagccgttgtagaatcactgcgcacc
tttaaggtgctgagagagaggaaaatccctccttggactgaaatcgttctggttccaaaa
acaggaaaggccagcttgtaccctggcctgtttctctttacaacaccatgtcgtttggtg
aggcctgttcgcaatttagctcttgggaaagaagagttgattggtacctttgaacagctt
tatatcaacgtgggaatactggaggacgaaatagagcctggagtgaccacacaccaggaa
ctgttccctcacagtatgctcagtgtcgtggccaactttattccctactcagaccacaac
cagagtcccagaaatatgtaccagtgtcagatgggtaaacagaccatgggtttccctctg
cactcgttcatggatcgctcagacaacaaactctacagactgcagaccccacaaagcccg
atggtcagaccctacatgtacgaccattacaacctggacaattaccccagtggcaccaac
gccatcgtggctgttatatcctacacaggctatgacatggaagatgcaatgatcgtgaac
aagtcatcatgggagagaggcttcgctcatggaagtatctacaagaccgagctggtggat
ctgacacaaaaagtcacaggagacgatggagttgtgtttgggaccacgcctgatgatccc
aaagtgaatggaaaactggatgctgatgggctgccgtacattgggtcaacacttaagtat
ggagaccctttctactgctccatcaacgtcaacactggtgacagccacatccactactac
aagagtcaagagacatgcgtggttgacaacataaagatctgcagcaacgaccatggcaca
ggccattttaaacgagtttgcatcacggtacgaatccccagaaaccccaccattggtgac
aagtttgccagtcgacacggtcagaagggcatcctgagtcggctgtggcccactgaggac
atgcccttcacagagagcggcatgactcccgacatcctgttcaacccccacggcttcccc
tctcgtatgaccatcgggatgctcatcgagagcatggctggcaagtctggcgcgctgcac
ggcctgagccacgacgctacgcctttcacattctcggagcagaactctgcgctggagtat
tttggtgaaatgctccgcgctggtggctacaactattacggcacggaacggctttacagt
ggcctgagcggactggagcttgaagccgacatcttcatcggggtcgtctactaccagcgt
ctacgtcacatggtttcagacaaatttcaagtgaggaccacaggagctcgtgacaaggtg
acaaaccagcccgtgggagggaggaacatccagggaggcatccgctttggtgagatggag
cgagacgccctgctggcacatggatcgtccttccttctccacgatcgccttttcaactgc
tcagaccgatcggtggctcaagtgtgcatggactgtggcagcctcctgtccccacttttg
gagaaaccacccccctcctggtcgtccatgcgacaccgtaaaactgtgtgcaccctgtgt
ggaaaaagtgactcaattgactctgtgtctgtcccttacgtcttcagatactttgtagcc
gagcttgcagcaatgaacatcaaggtcaaattagatgttaagtga
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