Cynoglossus semilaevis (tongue sole): 103387782
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Entry
103387782 CDS
T04866
Symbol
zswim8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csem04121
]
103387782 (zswim8)
Ubiquitin system [BR:
csem04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
103387782 (zswim8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Ribosomal_L24e
Motif
Other DBs
NCBI-GeneID:
103387782
NCBI-ProteinID:
XP_008320776
LinkDB
All DBs
Position
12:complement(17156908..17187685)
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AA seq
1972 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKSKD
GQVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEEDIRLYSCLANGS
PDEFQRGEQLYRIRAVKDPLQIGFHVSATVVSSQAGQSKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTEQCLTYEQIISWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTMSPCRRLELAGQLKLWHLKVIEIVKRGQHRKSLDKLFQGFKPAVESCFFNWEVAY
PLEGITYCSADKKSATFCWSRAVQHQRGVKAAAAAAAAAAAAGAVGEAAETDGGNRADSG
AGGDYKGRGSNHLSQQEVAVRPKETILTKRKGLTVSGGGGMLVRLGGSVSLSLEDGGGKC
MYKGSSASASGGKLKMTSGKGASASGPGGSGGIGGSKHVSAKRRTSSEDSSLEPDMAELS
LDDGCNLALGAEASNTFEFLPPAQEMLLSLSPLLRESRKYGSNNGGSKISETKSVSLNST
ALPGAEPSPTCFASKDTVIVVMDKPSAEDKEAKLEAESDLNGDEDAESAGSNRPSNSAAA
ATISDSAPKSTEALCGQAEDGPAGVAGSGAAAVDGAGGQDAAAAPPVPAAAGEALCEDDY
QAYYLSAASEEGADRQLAENNQEEEPDIFAGIKPLDQEGRMEVLFACAEALYAHGYSNEA
CRLAVELATDLLANPPDLKVEQPPTKGKKSKVSTSRQTQVATNTLSKGAFLLTVLSERTE
LHNLAFSTGMFSLELQRPPASTKALEVKLAYQESEVVALLKKIPLGLVEMSTIRERAEQL
RDGNFCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNRNNEMPGDEELGFEAAVAAL
GMKTTVSEAEHPLLCEGTRRVKGDLALALMITYKDDQSKLKKILDKLLDRESQTHKPQTL
SSFYSSKPAAGSQRSPSKHTASGHSGVGGTGGGASKHSASSSSNSAVAASSAAVTLAGEE
VAHQAELNQVQSSTAGESTSENREHVSDGPPSSNDHQNETAPFKLEATVPSRLALGARCS
YSQRCWGSPVRQKKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWPAASWGRGQDSDSI
SSSSSDSLGSSSSSGSRRAGGGARAKSSDTSRYKGRRPECHAPHVPNQPSEAAAHFYFEL
AKTVLIKAGGNSSTSIFTQPSASGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTY
SSHVSWITGQAMEIGSAALNILVECWDGHLTPPEVASLADRASRARDPNMVRAAAELALS
CLPHAHALNPNEIQRALVQCKEQDNVMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLY
EQSVGGGSGPQRETSGRCGANGGSGRRQLESTCVVLDSSANMESPGVATVTASVTAAAVV
PVISVGSTIYQSHAMPGQAIAHPHGPALHPYTTIQAHLPTVCTPQYIGHPMQHVPRPTVF
PVTGAAYPQGMHPAFIGAQYPFSVAAGPQPPPAAAVTFPGVPVPSMTQIAVHPYHAETGL
PLNTTVAVGSVHAGPTIQTIQGASLPSLSSQPASLVSTPFPTEDETHSQPISQQGLHYLH
SAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTEDVKWLLGLAARLGVNYVYQFCVGAAKG
VLSPFVLQEIIMEALQRLNPAHIHAHLRTPAFHQLVQRCQQAYLQYIHHRLIHLTPADYD
DFVNIIRSARGAFCLTPVGVMQFNDVLQNLKRGKQTKELWQRISLEMATFSP
NT seq
5919 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatgttcgccgagtgggaggacggggagaggttctctttcgaagactcggac
cgattcgaagaagactctctgtgctctttcatatcagaggccgagagcctctgtcagaac
tggagaggatggaggaagcagtctgcaggacccaactctcccactgtcaaaagcaaagat
ggccaggtcattccactggtggagttatcagcgaagcaggtagcgtttcatatcccattt
gaggtggtggagaaagtttatcctcccgttccagaacaacttcaactacgcattgcctat
tggagcttccctgaaaatgaggaagacatcaggttatattcttgcctggccaatgggagt
cctgatgaatttcaacgcggagagcaactttacaggattagagctgtcaaagacccactc
caaatcggcttccatgtcagtgccacagttgtgtccagtcaggctggtcagtctaaagga
gcctacaacgtggcagttatgtttgatcggtgtcgtataacttcctgtagctgcacctgt
ggagcaggagccaaatggtgtgcacacgtggtagccctgtgtctctttaggatccacaat
gcatcagctgtgtgtctccgagcaccagtctctgaatctctgtccagactgcagagggac
cagcttcagaaatttgcccagtacctcatcagtgagctcccccagcagatcctcccaaca
gctcaacggctgctggatgagctgctctcttctcagtccactgctataaacaccgtgtgt
ggagctccagacccgactgcaggtccgtcagcttccgatcagagcacgtggtatttggat
gagtccactctcagtgacaacatcaaaaagaccctgcataaattctgtggaccctcaccg
gtcgtcttcagtgatgtaaactccatgtacctgtcgtccacggagcctcctgctgctgcc
gagtgggcatgtctgctgcgacctctgagaggacgcgagccggagggcatctggaacctt
ctgtctatagtcagagaaatgttcaagaggagagacagcaacgcagcgccactgctggag
atactcacagagcagtgtctcacctatgaacagatcattagctggtggtacagcgtccgg
acgtcagcgtctcacagcagtgccagtggccacacggggcgcagcaatgggcaatccgaa
gtggcagctcacgcttgtgccagcatgtgtgatgagatggtggtcctctggagactggca
gtacttgatccaactatgagtccctgcaggcgtctggaactggcaggccagttgaagctg
tggcatctgaaggtcatcgaaatagtcaagcgagggcaacatcgaaagtccctggataaa
ctgtttcagggcttcaagcccgccgtcgagtcgtgcttttttaactgggaggtggcctat
cctctggaaggaatcacctattgcagtgctgataagaagagtgccaccttttgctggtcc
agggcagtgcagcaccagagaggggtcaaagctgccgctgcggctgctgctgcggccgcg
gccgcaggagcggtgggagaagctgcggaaacagatgggggaaacagagctgatagtgga
gccgggggggattataaaggtcgaggaagcaaccacctgtctcagcaagaagtggccgta
cgaccgaaggagaccattttgaccaagaggaaaggactgacggttagtggtgggggagga
atgctcgttcgcttggggggcagtgtctctctttcactggaagatggaggcggaaagtgc
atgtacaaagggtcctctgcctccgcctctggaggcaaactaaagatgacttccggaaag
ggagcatctgcgtcaggtcccggaggcagtggagggataggtggtagtaagcacgtcagt
gctaagagaagaaccagcagtgaggacagctctttggagccagacatggctgagctaagc
ctggacgatggctgcaatttggctttaggggccgaggcaagcaatacctttgagtttctg
ccaccagctcaagaaatgttgctgtctctgagcccactgctgagagagtcacgcaagtat
gggagtaacaatggagggagcaagatttcggaaacaaagagtgttagccttaattcgact
gcgctccctggcgcagagccgtctccgacgtgctttgcgtctaaagacactgtaattgtt
gttatggacaaaccaagcgctgaagacaaggaagccaaactggaagcggagtcagacctt
aacggagatgaagatgccgaatcggccggcagcaaccgtccctccaactctgctgctgct
gcaacaatctcggactctgctccaaaatctacagaggcgttgtgtggccaagcggaggat
ggccctgctggagtcgcaggaagcggagcagctgccgttgatggagcaggcggccaggat
gctgctgctgcccccccagtcccagctgcggcaggtgaagctctgtgtgaagatgactac
caagcgtactacctgagtgctgcctcagaggaaggagcagacagacagctggctgagaat
aaccaggaggaggaaccagacatatttgcagggattaaacctctggatcaggagggacgc
atggaggtgctgtttgcatgtgccgaggccctctatgctcatggttacagtaatgaggcg
tgtcgtttggcggtagagcttgccacagacctgttagccaaccctccagacctaaaggtg
gaacagccaccaacgaagggtaagaagagtaaggtgtccaccagtcgtcagacacaggta
gccactaataccttgtccaaaggcgccttcctcctcactgttctcagtgagagaacggag
cttcacaacctggccttcagcaccggcatgttctccctggaacttcagaggcctccggcg
tctaccaaagctctggaggtgaagctggcctaccaggagtctgaagtggtggctttgtta
aagaaaattcctctgggtctggtagaaatgtccaccatcagagagagagccgagcaactc
cgagatggaaacttctgtgactacaggcctgtgctgcctctcatgttggccagctttatc
ttcgatgtactgtgtactccagtggtgtcccccaccgggtcccgtccaccaagtcgaaat
cgcaacaacgagatgcccggcgacgaagagcttggatttgaggcggccgttgctgctctt
ggtatgaagaccacagttagtgaggccgaacatcctttgctctgtgaagggacccggcgg
gtgaagggtgatctagctcttgcccttatgatcacctacaaggatgaccagagcaagctt
aagaagatactggataagctattggacagagagagtcagacccacaaacctcagactttg
agctccttctactccagcaagccagccgccgggagccaacgcagtccgtccaagcacact
gcttccggacacagcggggtgggcggaactggtggaggtgcttccaaacattctgcgtcc
tcttcctcgaacagtgctgttgcggcatcttccgccgctgtgacactggccggtgaagag
gtagctcatcaggctgagcttaaccaagtgcagagcagtacagcgggggagagtacttcg
gagaacagggagcacgtatcagatgggcctccttcatccaacgaccaccagaatgaaaca
gctccctttaaactggaggctactgttcccagtagactggcactcggggctcgctgcagt
tacagccagcgctgctggggttcacctgtccggcagaaaaagaaacacacaggcatggca
agtattgacagcagtgctccagagaccacctcggacagttcacccacgctcagccgccgc
ccactgcgaggcggctggccagcagcatcttggggtcggggccaggacagtgacagcatc
agcagttcctcgtcagattctctgggatcttcttcctctagtggctctcgtagggcaggg
ggtggggcaagagccaagagcagtgacaccagcaggtacaaagggcgacgaccagaatgc
catgctccccacgtgcccaaccagccgtccgaagcagcagcccatttttactttgagcta
gccaagactgtgctgatcaaagctggaggaaactcttcaacttccatttttactcagccc
tcagccagtggtgggcaccagggcccccacagaaacctgcacctctgtgccttcgagatt
ggcttgtatgctcttggcctccacaactttgtgtcacccaactggctttcaagaacttat
tcctcccatgtgtcctggattactggtcaggccatggagatcggcagcgcagctcttaac
attttggtggagtgctgggatggtcacctaacccctccagaggtagcgtctttagcggac
cgcgcgtcacgagccagagaccccaacatggttcgagcagcagcagagctggcactgagc
tgcttgccccatgctcatgccctaaaccccaatgaaatccaacgagcactggtgcagtgc
aaagagcaggacaatgtgatgttggagaaggcctgtatggctgtagaggaagcagccaag
ggtggaggcgtatatcctgaggtcctgttcgaggttgctcaccaatggtactggctgtat
gagcagtcagtgggcgggggctcaggtccacagagggaaacctctggtcgctgcggggca
aacgggggctcaggaaggaggcagttagagtccacctgtgtggttcttgacagcagtgcc
aacatggagtcccctggggtagcaacagttacggcctcggtcacagcagcagctgtggtt
ccagtcatttcggtgggctccaccatataccagtcgcacgccatgcccggccaggcaatt
gctcacccacatggcccagccctccacccctacaccaccatacaggctcacctccccact
gtttgcactccacagtacatagggcatcctatgcagcatgtccctcgaccaactgtcttc
cctgtgactggtgctgcttatccacagggtatgcacccagcctttattggggcccagtat
ccattttctgtggctgctggtccacagccgccaccggcagctgctgtgacctttcctgga
gtccccgtgccgtccatgactcaaattgctgtccatccctaccacgcggagaccggcctg
cctctcaacaccactgtagcagtcggcagcgtccatgcaggccccaccatccagactatt
caaggagcatctctgccctcgttgtcctcacagccagcctcattggtcagcactcctttc
ccgactgaggacgagacgcacagccagccaatcagccagcagggcctgcactatctgcac
tctgcctacagagttggcatgttggcgttggagatgctgggtaggcgggctcacaatgac
caccccaacaatttttccaggagtccaccttacactgaggatgtaaaatggctgttggga
ctggctgctaggctgggggtcaactatgtgtaccagttttgtgttggggcagccaaaggt
gttctcagtccgttcgtccttcaggagataataatggaggcgctgcagagactaaacccc
gcccatattcatgcccatctacgtacgcctgctttccatcagcttgtacaacgctgtcaa
caggcgtatctgcagtacattcaccatcggctcatccacctgacacccgcggactacgac
gactttgtcaacatcatccgcagtgctcggggagctttctgcttgacgcccgttggtgtg
atgcagttcaatgacgtgctgcagaacctgaaaagaggcaagcagaccaaggagctgtgg
cagcgcatttctctggagatggcaaccttctccccgtga
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